Cow genome map

Conread name: rsug07_b12.y1

Conread position: 1-322
Cow position: chr23:37992605-37992922 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 12

Conread position: 1-333
Cow position: chr23:7392674-7392349 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 12

Conread position: 1-347
Cow position: chr23:2180043-2179687 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 12

Conread position: 1-363
Cow position: chr23:19759022-19758653 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 247
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 97, 143

Conread position: 1-363
Cow position: chr23:34315359-34314980 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 5

Conread position: 1-370
Cow position: chr23:22530799-22530431 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 124

Conread position: 1-396
Cow position: chr23:36309026-36309435 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 289
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 74, 12

Conread position: 1-398
Cow position: chr23:21336881-21336469 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 159

Conread position: 1-399
Cow position: chr23:10852664-10853071 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 10

Conread position: 1-399
Cow position: chr23:11128842-11129249 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 10

Conread position: 1-399
Cow position: chr23:34347944-34348335 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 275
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 19, 6

Conread position: 1-399
Cow position: chr23:36129290-36128893 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 10

Conread position: 1-408
Cow position: chr23:8911088-8911487 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 10

Conread position: 1-408
Cow position: chr23:14739062-14739467 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 10

Conread position: 1-411
Cow position: chr23:11473896-11473479 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 297
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 127, 12

Conread position: 1-413
Cow position: chr23:1398425-1398009 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 12

Conread position: 2-284
Cow position: chr23:23849363-23849659 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 203
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 35, 17

Conread position: 2-348
Cow position: chr23:361302-360955 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 159

Conread position: 2-363
Cow position: chr23:6158596-6158245 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 12

Conread position: 2-365
Cow position: chr23:344565-344197 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 9

Conread position: 2-412
Cow position: chr23:7175233-7175638 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 11

Conread position: 3-333
Cow position: chr23:5870576-5870237 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 10

Conread position: 3-399
Cow position: chr23:18367307-18367716 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 32

Conread position: 3-408
Cow position: chr23:1924223-1923812 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 102

Conread position: 3-408
Cow position: chr23:6593100-6592675 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 174

Conread position: 3-413
Cow position: chr23:416780-417177 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 118

Conread position: 4-309
Cow position: chr23:3167853-3168172 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 223
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 52, 0

Conread position: 4-333
Cow position: chr23:792411-792089 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 223
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 65, 119

Conread position: 4-367
Cow position: chr23:20435442-20435078 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 253
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 18, 248

Conread position: 4-399
Cow position: chr23:18322809-18322407 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 109

Conread position: 4-414
Cow position: chr23:34416181-34416592 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 9

Conread position: 5-370
Cow position: chr23:14839120-14838763 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 152

Conread position: 5-397
Cow position: chr23:10843939-10844307 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 34

Conread position: 6-283
Cow position: chr23:18371294-18371020 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 27, 45

Conread position: 6-312
Cow position: chr23:24504862-24505171 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 228
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 115, 154

Conread position: 6-391
Cow position: chr23:15710464-15710071 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 159

Conread position: 6-413
Cow position: chr23:1670534-1670932 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 74

Conread position: 7-272
Cow position: chr23:1430186-1429909 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 158

Conread position: 7-272
Cow position: chr23:1696443-1696710 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 189
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 135, 154

Conread position: 7-293
Cow position: chr23:25362957-25363253 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 217
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 108, 159

Conread position: 7-324
Cow position: chr23:41285553-41285858 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 52

Conread position: 7-333
Cow position: chr23:221689-222011 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 26

Conread position: 7-333
Cow position: chr23:30656543-30656232 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 107

Conread position: 7-334
Cow position: chr23:27564080-27563769 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 70

Conread position: 7-338
Cow position: chr23:18698413-18698076 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 154

Conread position: 7-343
Cow position: chr23:3727784-3727440 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 18

Conread position: 7-352
Cow position: chr23:6720662-6720318 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 242
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 86, 22

Conread position: 7-363
Cow position: chr23:32961763-32961388 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 162

Conread position: 7-371
Cow position: chr23:19002454-19002079 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 153

Conread position: 7-381
Cow position: chr23:16246358-16246722 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 267
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 120, 153

Conread position: 7-384
Cow position: chr23:3209002-3208618 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 110

Conread position: 7-385
Cow position: chr23:2502249-2501852 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 256
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 114, 19

Conread position: 7-392
Cow position: chr23:9268203-9268592 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 154

Conread position: 7-392
Cow position: chr23:9595215-9594824 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 160

Conread position: 7-398
Cow position: chr23:1700536-1700911 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 259
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 129, 150

Conread position: 7-399
Cow position: chr23:7596715-7596331 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 151

Conread position: 7-399
Cow position: chr23:10554397-10553993 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 153

Conread position: 7-399
Cow position: chr23:13520072-13520464 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 147

Conread position: 7-399
Cow position: chr23:13598968-13599358 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 79

Conread position: 7-399
Cow position: chr23:22804343-22804740 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 26

Conread position: 7-399
Cow position: chr23:32309295-32309699 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 274
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 114, 153

Conread position: 7-399
Cow position: chr23:39028408-39028796 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 279
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 25, 150

Conread position: 7-399
Cow position: chr23:40777877-40778281 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 153

Conread position: 7-400
Cow position: chr23:1535936-1536338 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 172

Conread position: 7-400
Cow position: chr23:14191165-14191571 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 148

Conread position: 7-408
Cow position: chr23:1254285-1254712 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 65

Conread position: 7-413
Cow position: chr23:13511350-13511752 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 150

Conread position: 7-413
Cow position: chr23:22298406-22298004 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 282
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 50, 157

Conread position: 7-413
Cow position: chr23:25676055-25675670 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 284
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 326, 96

Conread position: 7-414
Cow position: chr23:4980914-4980515 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 292
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 86, 52

Conread position: 7-414
Cow position: chr23:7844903-7845324 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 153

Conread position: 7-414
Cow position: chr23:8698060-8698451 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 150

Conread position: 7-414
Cow position: chr23:20744975-20744562 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 153

Conread position: 7-414
Cow position: chr23:24866920-24867340 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 102

Conread position: 7-416
Cow position: chr23:9874299-9874688 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 282
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 135, 89

Conread position: 8-279
Cow position: chr23:26003679-26003956 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 54

Conread position: 8-320
Cow position: chr23:14896179-14895871 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 233
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 133, 34

Conread position: 8-334
Cow position: chr23:26741835-26741513 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 158

Conread position: 8-363
Cow position: chr23:23470564-23470910 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 243
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 7, 120

Conread position: 8-399
Cow position: chr23:1647234-1647634 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 285
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 95, 102

Conread position: 8-413
Cow position: chr23:41472230-41472651 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 283
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 210, 108

Conread position: 10-328
Cow position: chr23:15702888-15702565 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 222
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 111, 150

Conread position: 12-369
Cow position: chr23:20980464-20980814 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 261
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 109, 88

Conread position: 13-399
Cow position: chr23:16700398-16700026 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 13

Conread position: 14-290
Cow position: chr23:40526350-40526066 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 202
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 107, 31

Conread position: 14-400
Cow position: chr23:1604848-1605245 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 148

Conread position: 14-406
Cow position: chr23:1321570-1321185 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 143

Conread position: 18-264
Cow position: chr23:27529664-27529416 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 189
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 16, 148

Conread position: 18-382
Cow position: chr23:533857-534229 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 140

Conread position: 19-415
Cow position: chr23:18802647-18802238 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 149

Conread position: 21-385
Cow position: chr23:406529-406170 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 49

Conread position: 23-413
Cow position: chr23:14164773-14164368 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 37

Conread position: 25-412
Cow position: chr23:24509335-24509723 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 135

Conread position: 35-285
Cow position: chr23:15729045-15728787 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 181
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 86, 66

Conread position: 35-288
Cow position: chr23:15003647-15003901 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 170
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 72, 57

Conread position: 35-321
Cow position: chr23:31607530-31607224 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 217
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 87, 137

Conread position: 35-376
Cow position: chr23:40780970-40781311 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 123

Conread position: 35-399
Cow position: chr23:9734062-9734426 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 8

Conread position: 35-408
Cow position: chr23:38455542-38455154 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 14

Conread position: 36-313
Cow position: chr23:9235422-9235151 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 205
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 85, 126

Conread position: 36-333
Cow position: chr23:7402349-7402644 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 124

Conread position: 37-289
Cow position: chr23:36688179-36687925 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 188
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 23, 12

Conread position: 41-318
Cow position: chr23:1760197-1760463 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 186
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 96, 69

Conread position: 41-399
Cow position: chr23:5151629-5152009 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 264
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 81, 37

Conread position: 44-399
Cow position: chr23:34356309-34356658 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 258
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 77, 116

Conread position: 47-408
Cow position: chr23:5162081-5162458 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 181

Conread position: 49-318
Cow position: chr23:29824408-29824135 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 199
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 72, 96

Conread position: 49-331
Cow position: chr23:13514837-13515119 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 197
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 49, 112

Conread position: 53-349
Cow position: chr23:37065501-37065804 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 28

Conread position: 55-400
Cow position: chr23:39752776-39753133 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 105

Conread position: 60-405
Cow position: chr23:6995299-6994961 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 247
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 77, 97

Conread position: 61-399
Cow position: chr23:1337646-1337288 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 256
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 60, 108

Conread position: 72-361
Cow position: chr23:39309435-39309145 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 213
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 63, 93

Conread position: 74-397
Cow position: chr23:4972468-4972780 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 235
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 47, 30

Conread position: 79-414
Cow position: chr23:2799254-2799611 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 243
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 40, 70

Conread position: 81-239
Cow position: chr23:36172234-36172395 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 40, 89

Conread position: 83-415
Cow position: chr23:16563533-16563870 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 243
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 38, 21

Conread position: 86-347
Cow position: chr23:22660873-22660625 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 184
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 50, 69

Conread position: 87-383
Cow position: chr23:3247285-3247581 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 70

Conread position: 92-415
Cow position: chr23:1883092-1883427 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 68

Conread position: 103-272
Cow position: chr23:35366388-35366213 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 18, 57

Conread position: 103-272
Cow position: chr23:35369300-35369125 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 18, 57

Conread position: 111-355
Cow position: chr23:33233187-33232943 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 180
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 10, 43

Conread position: 113-398
Cow position: chr23:3262776-3262482 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 209
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 24, 44

Conread position: 114-342
Cow position: chr23:1605403-1605628 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 43

Conread position: 115-326
Cow position: chr23:1545942-1546158 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 22, 40

Conread position: 115-333
Cow position: chr23:31601733-31601509 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 171
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 22, 48

Conread position: 118-413
Cow position: chr23:186899-187208 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 228
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 19, 45

Conread position: 121-325
Cow position: chr23:1690519-1690726 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 21, 36

Conread position: 123-333
Cow position: chr23:5617310-5617520 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 18, 36

Conread position: 123-352
Cow position: chr23:12408778-12408545 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 34

Conread position: 123-399
Cow position: chr23:38208446-38208742 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 215
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 95, 17

Conread position: 126-312
Cow position: chr23:4338870-4338682 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 91, 30

Conread position: 126-399
Cow position: chr23:29242680-29242965 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 213
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 16, 32

Conread position: 127-272
Cow position: chr23:11209746-11209896 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 10, 36

Conread position: 127-366
Cow position: chr23:36199030-36199268 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 181
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 10, 36

Conread position: 127-390
Cow position: chr23:21445860-21446120 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 193
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 17, 30

Conread position: 127-392
Cow position: chr23:20195181-20194912 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 198
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 10, 38

Conread position: 127-397
Cow position: chr23:25358470-25358743 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 203
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 82, 8

Conread position: 127-398
Cow position: chr23:21452994-21452715 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 206
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 91, 8

Conread position: 127-408
Cow position: chr23:4562627-4562910 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 88, 6

Conread position: 127-414
Cow position: chr23:3394750-3394469 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 205
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 71, 8

Conread position: 130-325
Cow position: chr23:1878129-1877939 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 153
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 88, 5

Conread position: 130-349
Cow position: chr23:21343508-21343289 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 88, 21

Conread position: 131-399
Cow position: chr23:11380517-11380237 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 196
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 6, 26

Conread position: 131-414
Cow position: chr23:11045225-11045518 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 220
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 8, 26

Conread position: 132-346
Cow position: chr23:7221271-7221054 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 88, 24

Conread position: 134-320
Cow position: chr23:1610597-1610784 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 82, 22

Conread position: 134-333
Cow position: chr23:33696030-33695830 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 83, 28

Conread position: 134-345
Cow position: chr23:4810495-4810711 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 165
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 86, 28

Conread position: 134-413
Cow position: chr23:16583164-16582880 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 212
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 100, 22

Conread position: 135-385
Cow position: chr23:15287388-15287136 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 186
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 83, 21

Conread position: 135-399
Cow position: chr23:26632546-26632820 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 208
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 83, 18

Conread position: 135-408
Cow position: chr23:19979202-19978929 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 205
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 72, 28

Conread position: 135-413
Cow position: chr23:20057121-20056834 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 205
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 83, 21

Conread position: 140-324
Cow position: chr23:9599253-9599429 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 22, 0

Conread position: 140-330
Cow position: chr23:2259846-2259656 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 153
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 78, 16

Conread position: 140-399
Cow position: chr23:16881406-16881147 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 93, 16

Conread position: 140-408
Cow position: chr23:29034064-29034343 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 201
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 77, 16

Conread position: 140-413
Cow position: chr23:1803545-1803816 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 204
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 78, 16

Conread position: 140-415
Cow position: chr23:6244836-6244564 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 198
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 78, 16

Conread position: 141-333
Cow position: chr23:41348896-41348702 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 77, 15

Conread position: 141-399
Cow position: chr23:18402534-18402274 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 188
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 80, 15

Conread position: 141-408
Cow position: chr23:2055454-2055729 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 205
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 86, 15

Conread position: 143-331
Cow position: chr23:6767646-6767831 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 74, 8

Conread position: 144-324
Cow position: chr23:11315262-11315088 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 155, 12

Conread position: 144-374
Cow position: chr23:7322042-7321818 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 158
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 73, 12

Conread position: 146-413
Cow position: chr23:5723298-5723575 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 193
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 72, 133

Conread position: 146-414
Cow position: chr23:5706756-5707024 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 203
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 72, 10

Conread position: 148-399
Cow position: chr23:24704033-24704300 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 193
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 26, 15

Conread position: 152-397
Cow position: chr23:22674677-22674424 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 177
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 174, 32

Conread position: 154-400
Cow position: chr23:10416660-10416404 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 69, 64

Conread position: 155-399
Cow position: chr23:35254474-35254229 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 173
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 69, 123

Conread position: 155-413
Cow position: chr23:15742863-15743121 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 186
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 178, 61

Conread position: 156-333
Cow position: chr23:11080846-11081018 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 62, 105

Conread position: 156-352
Cow position: chr23:25189104-25189309 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 13, 40

Conread position: 156-392
Cow position: chr23:32105637-32105879 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 168
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 61, 97

Conread position: 156-414
Cow position: chr23:6367370-6367641 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 192
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 118

Conread position: 157-398
Cow position: chr23:33717778-33717526 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 179
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 61, 124

Conread position: 157-413
Cow position: chr23:12050131-12050386 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 61, 133

Conread position: 157-413
Cow position: chr23:25378422-25378679 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 189
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 61, 14

Conread position: 157-413
Cow position: chr23:27544598-27544857 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 73, 61

Conread position: 158-333
Cow position: chr23:10868528-10868697 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 158-400
Cow position: chr23:2282407-2282162 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 176
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 38, 120

Conread position: 158-408
Cow position: chr23:1885409-1885148 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 184
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 60, 122

Conread position: 160-340
Cow position: chr23:3910237-3910054 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 38, 63

Conread position: 160-412
Cow position: chr23:7484848-7485098 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 178
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 57, 72

Conread position: 160-414
Cow position: chr23:17404619-17404870 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 177
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 169, 60

Conread position: 165-338
Cow position: chr23:4421203-4421036 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 165-399
Cow position: chr23:3955193-3955434 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 180
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 9, 55

Conread position: 172-372
Cow position: chr23:1489837-1490034 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 163, 46

Conread position: 173-385
Cow position: chr23:1068531-1068314 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 45, 106

Conread position: 183-352
Cow position: chr23:22399193-22399364 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 38, 98

Conread position: 183-397
Cow position: chr23:1742149-1742371 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 35, 92

Conread position: 183-414
Cow position: chr23:1776839-1776603 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 167
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 35, 97

Conread position: 184-413
Cow position: chr23:23409539-23409763 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 64, 34

Conread position: 187-347
Cow position: chr23:18296603-18296768 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 31, 89

Conread position: 187-376
Cow position: chr23:5191328-5191507 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 146, 31

Conread position: 187-408
Cow position: chr23:3191328-3191100 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 43, 29

Conread position: 189-399
Cow position: chr23:20248902-20248679 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 91

Conread position: 189-406
Cow position: chr23:16631062-16631292 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 104

Conread position: 194-399
Cow position: chr23:38973649-38973866 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 29, 24

Conread position: 195-414
Cow position: chr23:16847766-16848000 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 22, 98

Conread position: 202-408
Cow position: chr23:4104219-4104423 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 54

Conread position: 210-392
Cow position: chr23:18107521-18107335 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 61, 77

Conread position: 225-408
Cow position: chr23:18416210-18416026 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 108, 61

Conread position: 230-399
Cow position: chr23:23113872-23114048 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 103, 53

Conread position: 230-414
Cow position: chr23:1921384-1921196 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 104, 56

Show alignments to all cow chromosomes.