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Cow genome map

           
Conread name:
           
rsug07_b12.y1
        

               
Conread position:
               
1-258
               

               
Cow position:
               
chr25:22730255-22730502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
241, 13
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr25:11956432-11956730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
128, 10
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr25:21950732-21951050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
120, 12
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr25:36746841-36746513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
120, 34
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr25:20060423-20060052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 12
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr25:7216427-7216828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 10
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr25:24572676-24573072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 160
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr25:2046946-2046551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
92, 10
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr25:33255978-33256363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 10
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr25:30319844-30319436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 10
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr25:12824424-12824005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 10
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr25:14791363-14791777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 11
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr25:6464423-6464003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 12
               

               
Conread position:
               
2-363
               

               
Cow position:
               
chr25:2110690-2111037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 40
               

               
Conread position:
               
2-414
               

               
Cow position:
               
chr25:36779102-36779527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
117, 9
               

               
Conread position:
               
3-333
               

               
Cow position:
               
chr25:27621694-27622027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
118, 11
               

               
Conread position:
               
3-370
               

               
Cow position:
               
chr25:20076105-20076470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
134, 44
               

               
Conread position:
               
3-398
               

               
Cow position:
               
chr25:13569561-13569162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 157
               

               
Conread position:
               
3-408
               

               
Cow position:
               
chr25:1735704-1735300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 125
               

               
Conread position:
               
3-408
               

               
Cow position:
               
chr25:20403112-20402691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 11
               

               
Conread position:
               
3-413
               

               
Cow position:
               
chr25:10643700-10643284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 40
               

               
Conread position:
               
3-414
               

               
Cow position:
               
chr25:11666274-11666674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
330, 39
               

               
Conread position:
               
3-414
               

               
Cow position:
               
chr25:18294708-18294288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 10
               

               
Conread position:
               
4-353
               

               
Cow position:
               
chr25:40321686-40321336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
77, 157
               

               
Conread position:
               
4-388
               

               
Cow position:
               
chr25:14834061-14833664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
117, 98
               

               
Conread position:
               
4-399
               

               
Cow position:
               
chr25:22530895-22531294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 25
               

               
Conread position:
               
5-369
               

               
Cow position:
               
chr25:8576308-8576666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
132, 91
               

               
Conread position:
               
6-279
               

               
Cow position:
               
chr25:35617750-35618026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
121, 13
               

               
Conread position:
               
6-316
               

               
Cow position:
               
chr25:12235144-12234832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
115, 42
               

               
Conread position:
               
6-347
               

               
Cow position:
               
chr25:13333035-13333380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
134, 34
               

               
Conread position:
               
6-347
               

               
Cow position:
               
chr25:24136834-24136484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
80, 142
               

               
Conread position:
               
6-392
               

               
Cow position:
               
chr25:11662206-11661814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 130
               

               
Conread position:
               
6-414
               

               
Cow position:
               
chr25:2414446-2414841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
294, 147
               

               
Conread position:
               
7-221
               

               
Cow position:
               
chr25:36871469-36871684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
114, 153
               

               
Conread position:
               
7-251
               

               
Cow position:
               
chr25:33687288-33687035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
115, 155
               

               
Conread position:
               
7-261
               

               
Cow position:
               
chr25:17119575-17119319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 153
               

               
Conread position:
               
7-272
               

               
Cow position:
               
chr25:4488346-4488610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 110
               

               
Conread position:
               
7-272
               

               
Cow position:
               
chr25:11830285-11830019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 71
               

               
Conread position:
               
7-272
               

               
Cow position:
               
chr25:23829505-23829238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
33, 78
               

               
Conread position:
               
7-287
               

               
Cow position:
               
chr25:3992400-3992688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
114, 153
               

               
Conread position:
               
7-296
               

               
Cow position:
               
chr25:41387898-41387616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
211, 18
               

               
Conread position:
               
7-297
               

               
Cow position:
               
chr25:16430412-16430126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
114, 150
               

               
Conread position:
               
7-324
               

               
Cow position:
               
chr25:9641954-9642285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
114, 249
               

               
Conread position:
               
7-324
               

               
Cow position:
               
chr25:18448445-18448769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
15, 135
               

               
Conread position:
               
7-324
               

               
Cow position:
               
chr25:18490687-18491004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 12
               

               
Conread position:
               
7-324
               

               
Cow position:
               
chr25:24227730-24227402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
114, 157
               

               
Conread position:
               
7-324
               

               
Cow position:
               
chr25:41385496-41385173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
115, 154
               

               
Conread position:
               
7-325
               

               
Cow position:
               
chr25:21193333-21193004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 160
               

               
Conread position:
               
7-339
               

               
Cow position:
               
chr25:33838998-33839323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 153
               

               
Conread position:
               
7-347
               

               
Cow position:
               
chr25:23410275-23410619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 135
               

               
Conread position:
               
7-350
               

               
Cow position:
               
chr25:41364359-41364027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
95, 35
               

               
Conread position:
               
7-363
               

               
Cow position:
               
chr25:26225427-26225055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 42
               

               
Conread position:
               
7-370
               

               
Cow position:
               
chr25:20394817-20395169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 144
               

               
Conread position:
               
7-392
               

               
Cow position:
               
chr25:14225186-14224799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
108, 154
               

               
Conread position:
               
7-392
               

               
Cow position:
               
chr25:31733122-31732730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 82
               

               
Conread position:
               
7-395
               

               
Cow position:
               
chr25:11585123-11585525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 70
               

               
Conread position:
               
7-396
               

               
Cow position:
               
chr25:787883-788272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 54
               

               
Conread position:
               
7-396
               

               
Cow position:
               
chr25:27868420-27868812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 86
               

               
Conread position:
               
7-397
               

               
Cow position:
               
chr25:25827071-25827480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 156
               

               
Conread position:
               
7-399
               

               
Cow position:
               
chr25:26087125-26087530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 82
               

               
Conread position:
               
7-399
               

               
Cow position:
               
chr25:26654518-26654923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 63
               

               
Conread position:
               
7-399
               

               
Cow position:
               
chr25:35339945-35340341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 156
               

               
Conread position:
               
7-399
               

               
Cow position:
               
chr25:35347515-35347915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 28
               

               
Conread position:
               
7-408
               

               
Cow position:
               
chr25:6891917-6891515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 160
               

               
Conread position:
               
7-408
               

               
Cow position:
               
chr25:9396065-9396465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 141
               

               
Conread position:
               
7-408
               

               
Cow position:
               
chr25:17658225-17658631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 153
               

               
Conread position:
               
7-413
               

               
Cow position:
               
chr25:16922183-16921772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 19
               

               
Conread position:
               
7-413
               

               
Cow position:
               
chr25:21191100-21191514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 55
               

               
Conread position:
               
7-414
               

               
Cow position:
               
chr25:8120387-8120809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 149
               

               
Conread position:
               
7-414
               

               
Cow position:
               
chr25:11437192-11436781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 159
               

               
Conread position:
               
7-415
               

               
Cow position:
               
chr25:15319540-15319947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 35
               

               
Conread position:
               
8-276
               

               
Cow position:
               
chr25:1096188-1096464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 152
               

               
Conread position:
               
8-279
               

               
Cow position:
               
chr25:4049646-4049919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
120, 71
               

               
Conread position:
               
8-304
               

               
Cow position:
               
chr25:26353149-26352852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
209, 30
               

               
Conread position:
               
8-347
               

               
Cow position:
               
chr25:394967-395308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
8, 151
               

               
Conread position:
               
8-414
               

               
Cow position:
               
chr25:6226662-6227061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
5, 73
               

               
Conread position:
               
9-339
               

               
Cow position:
               
chr25:12204081-12204413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 152
               

               
Conread position:
               
11-399
               

               
Cow position:
               
chr25:23389658-23389267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 124
               

               
Conread position:
               
12-412
               

               
Cow position:
               
chr25:16064515-16064914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 26
               

               
Conread position:
               
14-325
               

               
Cow position:
               
chr25:21209329-21209020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 144
               

               
Conread position:
               
14-413
               

               
Cow position:
               
chr25:32191286-32191686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
105, 148
               

               
Conread position:
               
16-408
               

               
Cow position:
               
chr25:36761735-36762125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
126, 79
               

               
Conread position:
               
18-398
               

               
Cow position:
               
chr25:41363518-41363140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
201, 91
               

               
Conread position:
               
22-347
               

               
Cow position:
               
chr25:12239510-12239192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
111, 8
               

               
Conread position:
               
22-408
               

               
Cow position:
               
chr25:1837868-1838257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 135
               

               
Conread position:
               
25-414
               

               
Cow position:
               
chr25:4680868-4681257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
96, 66
               

               
Conread position:
               
30-386
               

               
Cow position:
               
chr25:15694617-15694980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
33, 27
               

               
Conread position:
               
34-270
               

               
Cow position:
               
chr25:9842642-9842883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
103, 93
               

               
Conread position:
               
35-278
               

               
Cow position:
               
chr25:35585881-35585633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
93, 7
               

               
Conread position:
               
36-279
               

               
Cow position:
               
chr25:36633342-36633095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
94, 6
               

               
Conread position:
               
36-348
               

               
Cow position:
               
chr25:40957347-40957031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
86, 133
               

               
Conread position:
               
38-325
               

               
Cow position:
               
chr25:9055846-9056125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
248, 83
               

               
Conread position:
               
38-327
               

               
Cow position:
               
chr25:15273331-15273618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
83, 128
               

               
Conread position:
               
38-413
               

               
Cow position:
               
chr25:5847154-5846784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
182, 80
               

               
Conread position:
               
41-323
               

               
Cow position:
               
chr25:18293415-18293674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
41-323
               

               
Cow position:
               
chr25:26238513-26238799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
70, 121
               

               
Conread position:
               
43-293
               

               
Cow position:
               
chr25:25866581-25866828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
94, 78
               

               
Conread position:
               
45-398
               

               
Cow position:
               
chr25:38981755-38982108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
77, 142
               

               
Conread position:
               
49-348
               

               
Cow position:
               
chr25:41351550-41351249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
68, 32
               

               
Conread position:
               
52-316
               

               
Cow position:
               
chr25:8485877-8485609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
84, 111
               

               
Conread position:
               
60-399
               

               
Cow position:
               
chr25:21245943-21245593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 100
               

               
Conread position:
               
62-320
               

               
Cow position:
               
chr25:26523644-26523890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
59, 98
               

               
Conread position:
               
62-408
               

               
Cow position:
               
chr25:9957369-9957018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 100
               

               
Conread position:
               
62-413
               

               
Cow position:
               
chr25:36037125-36036754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
59, 108
               

               
Conread position:
               
70-400
               

               
Cow position:
               
chr25:9961493-9961161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
137, 22
               

               
Conread position:
               
71-400
               

               
Cow position:
               
chr25:6886294-6885959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
142, 47
               

               
Conread position:
               
73-352
               

               
Cow position:
               
chr25:6424905-6424627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
63, 44
               

               
Conread position:
               
74-414
               

               
Cow position:
               
chr25:17975690-17975352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
47, 92
               

               
Conread position:
               
79-413
               

               
Cow position:
               
chr25:12097525-12097865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
60, 79
               

               
Conread position:
               
82-325
               

               
Cow position:
               
chr25:25051699-25051450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
39, 78
               

               
Conread position:
               
85-399
               

               
Cow position:
               
chr25:12817061-12817386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
36, 75
               

               
Conread position:
               
88-375
               

               
Cow position:
               
chr25:8347200-8347497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
33, 72
               

               
Conread position:
               
103-333
               

               
Cow position:
               
chr25:25948689-25948460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
18, 57
               

               
Conread position:
               
103-414
               

               
Cow position:
               
chr25:16319420-16319114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
115, 25
               

               
Conread position:
               
114-399
               

               
Cow position:
               
chr25:20023679-20023375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
28, 169
               

               
Conread position:
               
115-333
               

               
Cow position:
               
chr25:20348579-20348800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
22, 48
               

               
Conread position:
               
116-363
               

               
Cow position:
               
chr25:10366030-10365783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
18, 41
               

               
Conread position:
               
118-408
               

               
Cow position:
               
chr25:22297295-22297001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
23, 39
               

               
Conread position:
               
119-347
               

               
Cow position:
               
chr25:18075394-18075629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
120-414
               

               
Cow position:
               
chr25:14266776-14266492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
23, 37
               

               
Conread position:
               
121-396
               

               
Cow position:
               
chr25:36081602-36081885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
95, 34
               

               
Conread position:
               
121-399
               

               
Cow position:
               
chr25:14512843-14513125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
16, 36
               

               
Conread position:
               
121-413
               

               
Cow position:
               
chr25:36535705-36535408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
16, 42
               

               
Conread position:
               
123-333
               

               
Cow position:
               
chr25:10746630-10746836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
108, 27
               

               
Conread position:
               
123-408
               

               
Cow position:
               
chr25:7581697-7581411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
94, 33
               

               
Conread position:
               
125-313
               

               
Cow position:
               
chr25:40407738-40407552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
17, 32
               

               
Conread position:
               
125-400
               

               
Cow position:
               
chr25:36026739-36027013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
95, 37
               

               
Conread position:
               
126-298
               

               
Cow position:
               
chr25:18935143-18934969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
11, 31
               

               
Conread position:
               
126-333
               

               
Cow position:
               
chr25:17712268-17712475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
91, 9
               

               
Conread position:
               
126-347
               

               
Cow position:
               
chr25:33691288-33691511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
92, 9
               

               
Conread position:
               
126-400
               

               
Cow position:
               
chr25:22203958-22203673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
11, 37
               

               
Conread position:
               
127-363
               

               
Cow position:
               
chr25:35625438-35625213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
10, 28
               

               
Conread position:
               
127-385
               

               
Cow position:
               
chr25:26700775-26701027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
91, 8
               

               
Conread position:
               
130-272
               

               
Cow position:
               
chr25:10156329-10156470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
91, 9
               

               
Conread position:
               
130-333
               

               
Cow position:
               
chr25:6003255-6003053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
7, 27
               

               
Conread position:
               
130-399
               

               
Cow position:
               
chr25:20007878-20008143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
31, 6
               

               
Conread position:
               
130-413
               

               
Cow position:
               
chr25:21895149-21894859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 19
               

               
Conread position:
               
131-370
               

               
Cow position:
               
chr25:12778797-12778557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
6, 151
               

               
Conread position:
               
131-413
               

               
Cow position:
               
chr25:17566324-17566612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
6, 32
               

               
Conread position:
               
132-388
               

               
Cow position:
               
chr25:24669690-24669438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
93, 9
               

               
Conread position:
               
135-333
               

               
Cow position:
               
chr25:6474356-6474158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
83, 21
               

               
Conread position:
               
135-333
               

               
Cow position:
               
chr25:21266748-21266947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
61, 21
               

               
Conread position:
               
135-354
               

               
Cow position:
               
chr25:24452426-24452216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
67, 20
               

               
Conread position:
               
135-359
               

               
Cow position:
               
chr25:7306040-7306269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
78, 21
               

               
Conread position:
               
135-365
               

               
Cow position:
               
chr25:28188206-28187974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
82, 21
               

               
Conread position:
               
135-370
               

               
Cow position:
               
chr25:8918536-8918299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 21
               

               
Conread position:
               
135-384
               

               
Cow position:
               
chr25:19679084-19679333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
82, 27
               

               
Conread position:
               
135-400
               

               
Cow position:
               
chr25:16001779-16001513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
94, 21
               

               
Conread position:
               
135-407
               

               
Cow position:
               
chr25:12081573-12081301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
27, 57
               

               
Conread position:
               
135-414
               

               
Cow position:
               
chr25:13642574-13642288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
83, 20
               

               
Conread position:
               
135-414
               

               
Cow position:
               
chr25:33550248-33550535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
83, 27
               

               
Conread position:
               
140-361
               

               
Cow position:
               
chr25:38135494-38135714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
78, 23
               

               
Conread position:
               
140-400
               

               
Cow position:
               
chr25:4002543-4002814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
67, 14
               

               
Conread position:
               
140-414
               

               
Cow position:
               
chr25:18487421-18487694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
134, 22
               

               
Conread position:
               
140-414
               

               
Cow position:
               
chr25:19129599-19129881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
5, 24
               

               
Conread position:
               
142-413
               

               
Cow position:
               
chr25:37594163-37594431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
191, 14
               

               
Conread position:
               
143-361
               

               
Cow position:
               
chr25:20085037-20085251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
99, 13
               

               
Conread position:
               
144-374
               

               
Cow position:
               
chr25:24405985-24405752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
74, 12
               

               
Conread position:
               
144-408
               

               
Cow position:
               
chr25:2194695-2194952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
74, 5
               

               
Conread position:
               
146-333
               

               
Cow position:
               
chr25:15286791-15286603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
16, 106
               

               
Conread position:
               
149-408
               

               
Cow position:
               
chr25:18988132-18988410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
68, 16
               

               
Conread position:
               
153-392
               

               
Cow position:
               
chr25:7329302-7329553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
64, 128
               

               
Conread position:
               
156-399
               

               
Cow position:
               
chr25:38425126-38425372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 94
               

               
Conread position:
               
156-413
               

               
Cow position:
               
chr25:61418-61675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
62, 195
               

               
Conread position:
               
157-400
               

               
Cow position:
               
chr25:15377095-15377339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
175, 61
               

               
Conread position:
               
157-400
               

               
Cow position:
               
chr25:41132593-41132349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
82, 125
               

               
Conread position:
               
158-413
               

               
Cow position:
               
chr25:24008414-24008162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
62, 131
               

               
Conread position:
               
158-414
               

               
Cow position:
               
chr25:21289103-21289372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
61, 133
               

               
Conread position:
               
159-365
               

               
Cow position:
               
chr25:12840954-12840749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
128, 59
               

               
Conread position:
               
160-319
               

               
Cow position:
               
chr25:16316662-16316818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
67, 58
               

               
Conread position:
               
161-352
               

               
Cow position:
               
chr25:6256172-6255976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
59, 41
               

               
Conread position:
               
164-412
               

               
Cow position:
               
chr25:20785815-20785562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
51, 106
               

               
Conread position:
               
165-397
               

               
Cow position:
               
chr25:10218281-10218040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
31, 123
               

               
Conread position:
               
165-399
               

               
Cow position:
               
chr25:36033206-36033449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
52, 90
               

               
Conread position:
               
168-385
               

               
Cow position:
               
chr25:35332938-35333149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
30, 56
               

               
Conread position:
               
186-414
               

               
Cow position:
               
chr25:26270143-26269911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
34, 89
               

               
Conread position:
               
189-395
               

               
Cow position:
               
chr25:16714480-16714262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
29, 59
               

               
Conread position:
               
191-399
               

               
Cow position:
               
chr25:13294702-13294902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
83, 27
               

               
Conread position:
               
191-413
               

               
Cow position:
               
chr25:20133520-20133289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
5, 77
               

               
Conread position:
               
193-414
               

               
Cow position:
               
chr25:17914578-17914806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
23, 93
               

               
Conread position:
               
200-399
               

               
Cow position:
               
chr25:12755686-12755476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
18, 77
               

               
Conread position:
               
204-397
               

               
Cow position:
               
chr25:11315720-11315913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
17, 73
               

               
Conread position:
               
210-378
               

               
Cow position:
               
chr25:15440961-15440789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
115, 64
               

               
Conread position:
               
217-336
               

               
Cow position:
               
chr25:28612263-28612146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
87, 65
               

               
Conread position:
               
218-352
               

               
Cow position:
               
chr25:35110299-35110165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
115, 56
               

               
Conread position:
               
218-399
               

               
Cow position:
               
chr25:18894892-18894708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
118, 55
               

               
Conread position:
               
218-400
               

               
Cow position:
               
chr25:17342280-17342470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
114, 67
               

               
Conread position:
               
224-400
               

               
Cow position:
               
chr25:23323039-23323212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
109, 17
               

               
Conread position:
               
224-413
               

               
Cow position:
               
chr25:18905718-18905910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
109, 48
               

               
Conread position:
               
227-399
               

               
Cow position:
               
chr25:6121931-6121758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
126, 54
               

               
Conread position:
               
248-399
               

               
Cow position:
               
chr25:12997449-12997606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
85, 39
               
Show alignments to all cow chromosomes.