Cow genome map

Conread name: rsug07_b12.y1

Conread position: 1-327
Cow position:
Alignm length: 328
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 12

Conread position: 1-352
Cow position:
Alignm length: 361
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 12

Conread position: 1-397
Cow position:
Alignm length: 407
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 10

Conread position: 1-399
Cow position:
Alignm length: 426
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 12

Conread position: 1-400
Cow position:
Alignm length: 414
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 10

Conread position: 2-412
Cow position:
Alignm length: 421
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 102

Conread position: 3-216
Cow position:
Alignm length: 214
Alignm identity: 159
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 67, 0

Conread position: 3-297
Cow position:
Alignm length: 306
Alignm identity: 210
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 121, 10

Conread position: 3-300
Cow position:
Alignm length: 299
Alignm identity: 218
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 118, 10

Conread position: 3-331
Cow position:
Alignm length: 339
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 10

Conread position: 3-333
Cow position:
Alignm length: 337
Alignm identity: 238
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 121, 11

Conread position: 3-333
Cow position:
Alignm length: 343
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 10

Conread position: 3-346
Cow position:
Alignm length: 355
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 51

Conread position: 3-352
Cow position:
Alignm length: 363
Alignm identity: 258
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 75, 84

Conread position: 3-360
Cow position:
Alignm length: 373
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 10

Conread position: 3-369
Cow position:
Alignm length: 383
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 11

Conread position: 3-399
Cow position:
Alignm length: 410
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 10

Conread position: 3-400
Cow position:
Alignm length: 406
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 10

Conread position: 3-408
Cow position:
Alignm length: 419
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 158

Conread position: 3-413
Cow position:
Alignm length: 430
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 157

Conread position: 4-400
Cow position:
Alignm length: 408
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 153

Conread position: 6-218
Cow position:
Alignm length: 219
Alignm identity: 163
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 7, 153

Conread position: 6-312
Cow position:
Alignm length: 322
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 24

Conread position: 6-316
Cow position:
Alignm length: 322
Alignm identity: 219
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 43, 20

Conread position: 6-316
Cow position:
Alignm length: 325
Alignm identity: 223
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 115, 147

Conread position: 6-342
Cow position:
Alignm length: 343
Alignm identity: 227
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 136, 151

Conread position: 6-349
Cow position:
Alignm length: 349
Alignm identity: 245
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 219, 98

Conread position: 6-363
Cow position:
Alignm length: 374
Alignm identity: 258
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 9, 163

Conread position: 6-397
Cow position:
Alignm length: 397
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 63

Conread position: 6-400
Cow position:
Alignm length: 411
Alignm identity: 283
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 106, 8

Conread position: 7-219
Cow position:
Alignm length: 217
Alignm identity: 162
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 121, 153

Conread position: 7-258
Cow position:
Alignm length: 257
Alignm identity: 188
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 114, 153

Conread position: 7-271
Cow position:
Alignm length: 283
Alignm identity: 198
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 83, 161

Conread position: 7-277
Cow position:
Alignm length: 283
Alignm identity: 207
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 114, 153

Conread position: 7-316
Cow position:
Alignm length: 319
Alignm identity: 224
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 116, 18

Conread position: 7-333
Cow position:
Alignm length: 338
Alignm identity: 236
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 55, 159

Conread position: 7-333
Cow position:
Alignm length: 336
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 153

Conread position: 7-340
Cow position:
Alignm length: 355
Alignm identity: 252
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 128, 164

Conread position: 7-347
Cow position:
Alignm length: 355
Alignm identity: 240
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 55, 26

Conread position: 7-352
Cow position:
Alignm length: 350
Alignm identity: 250
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 265, 106

Conread position: 7-370
Cow position:
Alignm length: 375
Alignm identity: 262
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 208, 92

Conread position: 7-385
Cow position:
Alignm length: 397
Alignm identity: 263
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 35, 161

Conread position: 7-397
Cow position:
Alignm length: 409
Alignm identity: 287
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 114, 81

Conread position: 7-400
Cow position:
Alignm length: 412
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 75

Conread position: 7-408
Cow position:
Alignm length: 411
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 98

Conread position: 7-408
Cow position:
Alignm length: 424
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 86

Conread position: 7-408
Cow position:
Alignm length: 417
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 160

Conread position: 7-412
Cow position:
Alignm length: 415
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 96

Conread position: 7-413
Cow position:
Alignm length: 422
Alignm identity: 286
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 49, 17

Conread position: 8-297
Cow position:
Alignm length: 300
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 149

Conread position: 8-325
Cow position:
Alignm length: 329
Alignm identity: 226
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 24, 36

Conread position: 8-395
Cow position:
Alignm length: 394
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 153

Conread position: 8-411
Cow position:
Alignm length: 429
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 136

Conread position: 8-414
Cow position:
Alignm length: 425
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 151

Conread position: 9-414
Cow position:
Alignm length: 421
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 112

Conread position: 9-414
Cow position:
Alignm length: 417
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 104

Conread position: 10-392
Cow position:
Alignm length: 398
Alignm identity: 267
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 111, 32

Conread position: 14-321
Cow position:
Alignm length: 318
Alignm identity: 229
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 107, 46

Conread position: 14-359
Cow position:
Alignm length: 350
Alignm identity: 231
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 201, 104

Conread position: 14-398
Cow position:
Alignm length: 420
Alignm identity: 292
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 107, 265

Conread position: 14-407
Cow position:
Alignm length: 410
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 145

Conread position: 15-385
Cow position:
Alignm length: 388
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 156

Conread position: 22-399
Cow position:
Alignm length: 383
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 135

Conread position: 35-385
Cow position:
Alignm length: 368
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 136

Conread position: 35-414
Cow position:
Alignm length: 392
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 125

Conread position: 36-333
Cow position:
Alignm length: 311
Alignm identity: 214
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 91, 77

Conread position: 36-408
Cow position:
Alignm length: 391
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 38

Conread position: 38-348
Cow position:
Alignm length: 325
Alignm identity: 227
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 85, 132

Conread position: 41-324
Cow position:
Alignm length: 291
Alignm identity: 200
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 100, 86

Conread position: 41-338
Cow position:
Alignm length: 307
Alignm identity: 220
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 80, 119

Conread position: 46-355
Cow position:
Alignm length: 313
Alignm identity: 226
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 286, 42

Conread position: 50-275
Cow position:
Alignm length: 235
Alignm identity: 159
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 50-414
Cow position:
Alignm length: 382
Alignm identity: 255
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 71, 119

Conread position: 55-414
Cow position:
Alignm length: 380
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 106

Conread position: 60-278
Cow position:
Alignm length: 230
Alignm identity: 155
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 65, 107

Conread position: 60-307
Cow position:
Alignm length: 256
Alignm identity: 179
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 61, 98

Conread position: 65-397
Cow position:
Alignm length: 355
Alignm identity: 251
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 72, 46

Conread position: 66-399
Cow position:
Alignm length: 349
Alignm identity: 247
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 55, 8

Conread position: 69-399
Cow position:
Alignm length: 343
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 91

Conread position: 77-399
Cow position:
Alignm length: 344
Alignm identity: 237
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 44, 82

Conread position: 82-397
Cow position:
Alignm length: 327
Alignm identity: 229
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 55, 81

Conread position: 87-384
Cow position:
Alignm length: 304
Alignm identity: 212
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 34, 79

Conread position: 92-371
Cow position:
Alignm length: 298
Alignm identity: 210
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 47, 66

Conread position: 95-408
Cow position:
Alignm length: 324
Alignm identity: 225
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 27, 65

Conread position: 96-398
Cow position:
Alignm length: 321
Alignm identity: 236
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 64

Conread position: 103-399
Cow position:
Alignm length: 313
Alignm identity: 229
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 34, 62

Conread position: 103-400
Cow position:
Alignm length: 317
Alignm identity: 224
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 18, 57

Conread position: 107-414
Cow position:
Alignm length: 322
Alignm identity: 221
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 30, 50

Conread position: 115-349
Cow position:
Alignm length: 243
Alignm identity: 169
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 14

Conread position: 115-373
Cow position:
Alignm length: 268
Alignm identity: 195
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 22, 49

Conread position: 123-414
Cow position:
Alignm length: 306
Alignm identity: 217
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 15, 34

Conread position: 126-400
Cow position:
Alignm length: 287
Alignm identity: 202
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 92, 30

Conread position: 126-414
Cow position:
Alignm length: 304
Alignm identity: 214
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 91, 9

Conread position: 127-373
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 10, 36

Conread position: 127-385
Cow position:
Alignm length: 273
Alignm identity: 199
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 90, 29

Conread position: 127-397
Cow position:
Alignm length: 279
Alignm identity: 201
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 18, 8

Conread position: 127-408
Cow position:
Alignm length: 299
Alignm identity: 204
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 10, 30

Conread position: 127-414
Cow position:
Alignm length: 295
Alignm identity: 212
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 123, 8

Conread position: 127-414
Cow position:
Alignm length: 297
Alignm identity: 212
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 9, 36

Conread position: 129-413
Cow position:
Alignm length: 302
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 130-399
Cow position:
Alignm length: 292
Alignm identity: 211
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 8, 154

Conread position: 132-414
Cow position:
Alignm length: 291
Alignm identity: 205
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 130, 15

Conread position: 133-413
Cow position:
Alignm length: 294
Alignm identity: 212
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 83, 7

Conread position: 135-288
Cow position:
Alignm length: 155
Alignm identity: 114
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 92, 83

Conread position: 135-333
Cow position:
Alignm length: 204
Alignm identity: 152
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 85, 21

Conread position: 135-393
Cow position:
Alignm length: 270
Alignm identity: 197
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 85, 27

Conread position: 135-399
Cow position:
Alignm length: 276
Alignm identity: 193
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 85, 21

Conread position: 135-408
Cow position:
Alignm length: 285
Alignm identity: 200
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 104, 21

Conread position: 135-413
Cow position:
Alignm length: 287
Alignm identity: 202
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 100, 21

Conread position: 140-347
Cow position:
Alignm length: 219
Alignm identity: 157
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 67, 16

Conread position: 140-367
Cow position:
Alignm length: 233
Alignm identity: 169
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 75, 16

Conread position: 140-400
Cow position:
Alignm length: 268
Alignm identity: 195
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 77, 16

Conread position: 140-400
Cow position:
Alignm length: 267
Alignm identity: 197
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 77, 22

Conread position: 140-414
Cow position:
Alignm length: 291
Alignm identity: 197
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 77, 22

Conread position: 141-395
Cow position:
Alignm length: 268
Alignm identity: 196
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 76, 15

Conread position: 141-400
Cow position:
Alignm length: 267
Alignm identity: 187
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 76, 15

Conread position: 143-410
Cow position:
Alignm length: 283
Alignm identity: 202
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 75, 19

Conread position: 144-400
Cow position:
Alignm length: 268
Alignm identity: 192
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 74, 12

Conread position: 147-334
Cow position:
Alignm length: 196
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 74, 9

Conread position: 157-413
Cow position:
Alignm length: 267
Alignm identity: 193
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 176, 51

Conread position: 157-414
Cow position:
Alignm length: 274
Alignm identity: 185
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 63, 136

Conread position: 157-415
Cow position:
Alignm length: 272
Alignm identity: 188
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 86, 61

Conread position: 158-400
Cow position:
Alignm length: 244
Alignm identity: 169
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 203, 61

Conread position: 158-413
Cow position:
Alignm length: 274
Alignm identity: 203
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 57, 97

Conread position: 164-399
Cow position:
Alignm length: 241
Alignm identity: 166
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 60, 17

Conread position: 164-413
Cow position:
Alignm length: 262
Alignm identity: 181
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 120

Conread position: 168-413
Cow position:
Alignm length: 260
Alignm identity: 187
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 49, 110

Conread position: 177-399
Cow position:
Alignm length: 234
Alignm identity: 166
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 53, 41

Conread position: 185-371
Cow position:
Alignm length: 200
Alignm identity: 149
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 97

Conread position: 193-399
Cow position:
Alignm length: 219
Alignm identity: 155
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 87

Conread position: 195-400
Cow position:
Alignm length: 211
Alignm identity: 150
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 83

Conread position: 199-413
Cow position:
Alignm length: 225
Alignm identity: 158
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 19, 77

Conread position: 218-408
Cow position:
Alignm length: 196
Alignm identity: 141
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 115, 29

Conread position: 218-408
Cow position:
Alignm length: 198
Alignm identity: 143
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 115, 56

Conread position: 222-332
Cow position:
Alignm length: 111
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 226-397
Cow position:
Alignm length: 180
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 106, 48

Conread position: 231-397
Cow position:
Alignm length: 174
Alignm identity: 130
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 102, 54

Show alignments to all cow chromosomes.