Cow genome map

Conread name: rsug07_b12.y1

Conread position: 1-311
Cow position: chr29:32308718-32308405 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 10

Conread position: 1-324
Cow position: chr29:20933312-20933642 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 12

Conread position: 1-333
Cow position: chr29:6635709-6636038 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 165

Conread position: 1-350
Cow position: chr29:26980008-26980358 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 240
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 124, 24

Conread position: 1-382
Cow position: chr29:17607022-17607412 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 277
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 120, 10

Conread position: 1-399
Cow position: chr29:11704747-11705132 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 279
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 216, 10

Conread position: 1-399
Cow position: chr29:22935893-22936283 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 10

Conread position: 1-399
Cow position: chr29:26778497-26778894 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 12

Conread position: 1-400
Cow position: chr29:35459152-35458759 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 13

Conread position: 1-406
Cow position: chr29:36586185-36586585 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 12

Conread position: 1-413
Cow position: chr29:87407-86986 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 12

Conread position: 1-413
Cow position: chr29:1325044-1325468 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 298
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 41, 10

Conread position: 1-413
Cow position: chr29:12005159-12004737 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 13

Conread position: 1-413
Cow position: chr29:17408939-17409360 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 12

Conread position: 2-333
Cow position: chr29:16609347-16609681 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 12

Conread position: 2-365
Cow position: chr29:29550930-29551289 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 250
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 135, 47

Conread position: 2-399
Cow position: chr29:32290209-32290620 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 9

Conread position: 2-400
Cow position: chr29:26130400-26130785 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 11

Conread position: 3-318
Cow position: chr29:35434478-35434799 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 235
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 118, 10

Conread position: 3-325
Cow position: chr29:19756055-19756378 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 157

Conread position: 3-333
Cow position: chr29:2415199-2414875 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 240
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 134, 10

Conread position: 3-333
Cow position: chr29:20674200-20673860 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 10

Conread position: 3-333
Cow position: chr29:45650732-45650404 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 83

Conread position: 3-399
Cow position: chr29:24952294-24952699 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 39

Conread position: 3-412
Cow position: chr29:32963149-32963573 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 32

Conread position: 3-413
Cow position: chr29:28868238-28868664 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 95

Conread position: 3-413
Cow position: chr29:31926684-31926264 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 158

Conread position: 3-414
Cow position: chr29:2188740-2188330 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 298
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 118, 10

Conread position: 3-414
Cow position: chr29:19792659-19792250 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 10

Conread position: 4-298
Cow position: chr29:27835828-27836129 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 207
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 117, 160

Conread position: 4-397
Cow position: chr29:7666422-7666020 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 156

Conread position: 4-413
Cow position: chr29:6925626-6926034 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 150

Conread position: 5-413
Cow position: chr29:19428282-19428684 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 113

Conread position: 5-413
Cow position: chr29:27833596-27834014 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 290
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 115, 155

Conread position: 6-283
Cow position: chr29:13040943-13040658 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 199
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 115, 66

Conread position: 6-324
Cow position: chr29:649878-650209 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 234
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 115, 166

Conread position: 6-324
Cow position: chr29:16612342-16612022 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 225
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 98, 92

Conread position: 6-350
Cow position: chr29:26335767-26335417 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 245
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 115, 39

Conread position: 6-398
Cow position: chr29:24345854-24345437 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 154

Conread position: 6-408
Cow position: chr29:6217945-6217534 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 161

Conread position: 7-272
Cow position: chr29:21665586-21665852 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 111

Conread position: 7-275
Cow position: chr29:29066038-29066311 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 97

Conread position: 7-276
Cow position: chr29:29632326-29632047 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 164

Conread position: 7-308
Cow position: chr29:12309610-12309908 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 219
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 114, 36

Conread position: 7-324
Cow position: chr29:9332755-9333060 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 233
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 121, 159

Conread position: 7-333
Cow position: chr29:1933949-1933615 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 162

Conread position: 7-333
Cow position: chr29:40337921-40337590 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 235
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 79, 167

Conread position: 7-333
Cow position: chr29:42821397-42821727 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 228
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 130, 88

Conread position: 7-338
Cow position: chr29:15941027-15940691 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 243
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 114, 153

Conread position: 7-340
Cow position: chr29:23119766-23119431 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 242
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 114, 153

Conread position: 7-352
Cow position: chr29:4120464-4120809 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 44

Conread position: 7-352
Cow position: chr29:17668116-17668450 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 247
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 33, 125

Conread position: 7-389
Cow position: chr29:45006005-45005626 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 159

Conread position: 7-392
Cow position: chr29:36530475-36530871 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 78

Conread position: 7-398
Cow position: chr29:21197039-21196641 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 153

Conread position: 7-398
Cow position: chr29:29056794-29057189 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 278
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 121, 154

Conread position: 7-398
Cow position: chr29:40096576-40096976 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 153

Conread position: 7-400
Cow position: chr29:9911773-9912188 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 168

Conread position: 7-408
Cow position: chr29:26017899-26017484 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 35

Conread position: 7-413
Cow position: chr29:732237-732646 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 149

Conread position: 7-413
Cow position: chr29:10154171-10153770 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 268
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 205, 53

Conread position: 7-413
Cow position: chr29:35502035-35501629 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 151

Conread position: 7-413
Cow position: chr29:36216730-36217140 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 152

Conread position: 7-415
Cow position: chr29:41811963-41811560 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 150

Conread position: 8-297
Cow position: chr29:36242954-36243247 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 219
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 7, 35

Conread position: 8-304
Cow position: chr29:2837446-2837143 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 213
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 119, 152

Conread position: 8-316
Cow position: chr29:24420529-24420222 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 219
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 112, 152

Conread position: 8-318
Cow position: chr29:686579-686262 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 152

Conread position: 8-345
Cow position: chr29:603682-603367 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 227
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 79, 0

Conread position: 8-352
Cow position: chr29:4367349-4367683 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 242
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 198, 108

Conread position: 8-363
Cow position: chr29:18072550-18072905 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 254
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 199, 112

Conread position: 8-399
Cow position: chr29:7956353-7955979 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 274
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 210, 84

Conread position: 8-414
Cow position: chr29:10156677-10156276 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 157

Conread position: 9-348
Cow position: chr29:26290968-26290629 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 228
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 109, 149

Conread position: 9-399
Cow position: chr29:4480561-4480159 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 158

Conread position: 9-414
Cow position: chr29:19761888-19762297 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 148

Conread position: 10-414
Cow position: chr29:26616122-26615694 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 284

Conread position: 12-399
Cow position: chr29:26981119-26981499 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 264
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 125, 86

Conread position: 14-324
Cow position: chr29:17543072-17543381 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 220
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 107, 29

Conread position: 14-333
Cow position: chr29:26771044-26771373 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 235
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 82, 172

Conread position: 14-395
Cow position: chr29:28195904-28195508 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 245

Conread position: 14-413
Cow position: chr29:39567304-39567711 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 148

Conread position: 16-325
Cow position: chr29:15944189-15944504 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 150

Conread position: 17-414
Cow position: chr29:2744651-2744241 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 149

Conread position: 18-413
Cow position: chr29:32800085-32799686 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 146

Conread position: 20-399
Cow position: chr29:18212352-18211983 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 22

Conread position: 21-304
Cow position: chr29:40894566-40894848 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 198
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 100, 135

Conread position: 21-342
Cow position: chr29:26519834-26519513 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 57

Conread position: 21-399
Cow position: chr29:35484870-35485257 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 51

Conread position: 22-385
Cow position: chr29:6014718-6015121 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 275
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 39, 149

Conread position: 22-413
Cow position: chr29:17467-17082 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 279
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 115, 72

Conread position: 24-273
Cow position: chr29:4221014-4221264 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 172
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 197, 97

Conread position: 25-414
Cow position: chr29:15738715-15738314 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 284
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 96, 141

Conread position: 31-395
Cow position: chr29:5892485-5892852 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 269
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 107, 131

Conread position: 32-414
Cow position: chr29:4625357-4624970 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 134

Conread position: 36-400
Cow position: chr29:37785546-37785160 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 137

Conread position: 41-352
Cow position: chr29:12798577-12798880 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 117

Conread position: 41-384
Cow position: chr29:29512485-29512144 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 234
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 84, 19

Conread position: 41-399
Cow position: chr29:29974690-29975049 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 264
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 80, 8

Conread position: 43-277
Cow position: chr29:16302650-16302419 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 157
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 85, 112

Conread position: 49-339
Cow position: chr29:18338892-18338597 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 204
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 92, 110

Conread position: 49-358
Cow position: chr29:5977468-5977146 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 225
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 72, 111

Conread position: 51-249
Cow position: chr29:31899365-31899167 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 70, 53

Conread position: 52-385
Cow position: chr29:9686353-9686009 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 253
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 68, 116

Conread position: 52-415
Cow position: chr29:9709355-9709722 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 98

Conread position: 58-349
Cow position: chr29:19907020-19907313 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 211
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 9, 62

Conread position: 61-347
Cow position: chr29:7408225-7407932 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 210
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 21, 100

Conread position: 61-397
Cow position: chr29:40583462-40583802 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 231
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 52, 105

Conread position: 63-339
Cow position: chr29:20626244-20626520 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 198
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 58, 97

Conread position: 64-361
Cow position: chr29:36037380-36037673 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 214
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 57, 102

Conread position: 69-279
Cow position: chr29:26559844-26559636 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 68, 96

Conread position: 69-325
Cow position: chr29:10838624-10838881 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 182
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 52, 13

Conread position: 70-392
Cow position: chr29:28273711-28273384 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 229
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 37, 52

Conread position: 73-333
Cow position: chr29:14207345-14207078 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 186
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 49, 87

Conread position: 73-389
Cow position: chr29:16657368-16657695 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 238
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 48, 87

Conread position: 75-333
Cow position: chr29:8164183-8163919 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 192
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 46, 25

Conread position: 79-399
Cow position: chr29:4328117-4328429 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 240
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 42, 81

Conread position: 80-333
Cow position: chr29:21000322-21000582 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 189
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 18, 83

Conread position: 84-400
Cow position: chr29:44310340-44310015 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 218
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 47

Conread position: 85-415
Cow position: chr29:10456863-10456535 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 235
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 36, 73

Conread position: 88-298
Cow position: chr29:22720823-22721036 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 164
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 49, 69

Conread position: 94-352
Cow position: chr29:2644610-2644342 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 194
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 39, 69

Conread position: 100-385
Cow position: chr29:6844925-6844635 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 222
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 21, 60

Conread position: 102-414
Cow position: chr29:14501303-14501619 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 229
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 35, 61

Conread position: 103-339
Cow position: chr29:45589878-45589647 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 65

Conread position: 103-400
Cow position: chr29:26734740-26735041 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 225
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 18, 57

Conread position: 106-335
Cow position: chr29:3395823-3396046 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 31, 57

Conread position: 107-413
Cow position: chr29:22069033-22068715 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 221
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 7, 20

Conread position: 109-330
Cow position: chr29:39111592-39111379 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 29, 48

Conread position: 113-325
Cow position: chr29:34360074-34359873 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 24, 44

Conread position: 113-398
Cow position: chr29:35636144-35636436 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 197
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 24, 50

Conread position: 114-272
Cow position: chr29:45588754-45588591 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 23, 51

Conread position: 114-314
Cow position: chr29:43252966-43252766 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 22, 43

Conread position: 115-325
Cow position: chr29:37961250-37961046 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 100, 36

Conread position: 115-414
Cow position: chr29:699887-699589 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 218
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 22, 34

Conread position: 121-338
Cow position: chr29:18878773-18878555 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 16, 45

Conread position: 123-398
Cow position: chr29:40891972-40891686 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 208
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 16, 34

Conread position: 124-414
Cow position: chr29:22162522-22162223 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 218
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 9, 95

Conread position: 127-344
Cow position: chr29:13615909-13615684 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 170
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 10, 36

Conread position: 127-348
Cow position: chr29:4065822-4066043 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 177
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 13, 24

Conread position: 127-352
Cow position: chr29:19338715-19338948 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 174
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 91, 8

Conread position: 127-412
Cow position: chr29:2984623-2984915 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 213
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 91, 7

Conread position: 127-413
Cow position: chr29:22175427-22175706 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 205
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 15, 30

Conread position: 127-413
Cow position: chr29:25333717-25333434 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 201
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 93, 8

Conread position: 127-414
Cow position: chr29:12679890-12680182 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 209
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 87, 29

Conread position: 128-413
Cow position: chr29:41747177-41747473 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 212
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 89, 21

Conread position: 129-365
Cow position: chr29:4194385-4194144 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 184
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 5, 25

Conread position: 130-333
Cow position: chr29:5919588-5919383 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 12, 33

Conread position: 130-370
Cow position: chr29:40165979-40166221 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 179
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 12, 27

Conread position: 130-399
Cow position: chr29:31928718-31929000 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 210
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 80, 5

Conread position: 131-413
Cow position: chr29:41530588-41530875 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 208
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 6, 26

Conread position: 133-399
Cow position: chr29:12784214-12783949 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 204
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 111, 23

Conread position: 133-414
Cow position: chr29:1556673-1556957 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 200
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 84, 29

Conread position: 135-253
Cow position: chr29:38731368-38731482 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 135-356
Cow position: chr29:4804976-4805197 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 88, 21

Conread position: 135-396
Cow position: chr29:25088496-25088754 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 199
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 83, 21

Conread position: 135-399
Cow position: chr29:109453-109706 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 188
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 86, 21

Conread position: 135-413
Cow position: chr29:34297822-34297543 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 201
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 82, 27

Conread position: 140-330
Cow position: chr29:5099014-5098824 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 77, 22

Conread position: 140-392
Cow position: chr29:16756803-16757059 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 185
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 77, 16

Conread position: 140-399
Cow position: chr29:16195600-16195853 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 178
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 93, 15

Conread position: 140-400
Cow position: chr29:19389234-19389490 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 190
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 70, 22

Conread position: 140-414
Cow position: chr29:2522326-2522591 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 193
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 77, 16

Conread position: 140-414
Cow position: chr29:21933365-21933095 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 191
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 91, 22

Conread position: 140-414
Cow position: chr29:29769598-29769325 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 16

Conread position: 140-414
Cow position: chr29:31594367-31594101 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 202
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 195, 16

Conread position: 141-413
Cow position: chr29:17222157-17222438 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 201
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 79, 21

Conread position: 142-399
Cow position: chr29:35738520-35738261 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 195
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 76, 14

Conread position: 142-408
Cow position: chr29:29475497-29475236 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 180
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 192, 36

Conread position: 143-397
Cow position: chr29:707194-706940 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 192
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 82, 13

Conread position: 144-385
Cow position: chr29:37292529-37292776 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 180
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 79, 12

Conread position: 144-400
Cow position: chr29:23984212-23983943 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 197
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 74, 12

Conread position: 145-413
Cow position: chr29:44378665-44378389 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 193
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 75, 11

Conread position: 145-414
Cow position: chr29:25737664-25737388 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 193
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 80, 11

Conread position: 146-408
Cow position: chr29:20903534-20903270 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 197
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 71, 10

Conread position: 153-408
Cow position: chr29:6286400-6286141 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 185
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 10, 89

Conread position: 155-352
Cow position: chr29:36183036-36183242 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 55, 112

Conread position: 155-415
Cow position: chr29:34773967-34773710 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 177
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 180, 61

Conread position: 156-413
Cow position: chr29:4520097-4520365 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 204
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 61, 121

Conread position: 156-414
Cow position: chr29:19254061-19253803 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 182
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 64, 131

Conread position: 156-414
Cow position: chr29:22714966-22714697 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 188
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 61, 126

Conread position: 157-373
Cow position: chr29:16309513-16309722 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 166
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 176, 61

Conread position: 157-398
Cow position: chr29:32767758-32767522 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 74, 89

Conread position: 158-397
Cow position: chr29:1395369-1395607 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 175, 50

Conread position: 158-406
Cow position: chr29:25474671-25474941 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 197
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 60, 221

Conread position: 159-413
Cow position: chr29:23697743-23698002 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 189
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 55, 92

Conread position: 159-415
Cow position: chr29:24103784-24103513 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 196
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 59, 123

Conread position: 160-392
Cow position: chr29:34744851-34744616 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 63, 58

Conread position: 160-413
Cow position: chr29:14615492-14615238 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 170
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 58, 12

Conread position: 160-414
Cow position: chr29:22613198-22613456 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 185
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 60, 6

Conread position: 160-414
Cow position: chr29:23844597-23844864 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 180
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 57, 155

Conread position: 161-413
Cow position: chr29:26329981-26330231 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 176
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 64, 22

Conread position: 164-395
Cow position: chr29:39642946-39643183 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 56, 111

Conread position: 164-408
Cow position: chr29:868542-868795 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 175
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 53, 115

Conread position: 165-408
Cow position: chr29:1229379-1229627 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 177
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 116

Conread position: 166-399
Cow position: chr29:19821068-19821295 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 159
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 178, 52

Conread position: 169-349
Cow position: chr29:3711161-3711348 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 49, 79

Conread position: 172-415
Cow position: chr29:2532839-2533086 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 179
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 46, 109

Conread position: 174-399
Cow position: chr29:463874-463643 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 116

Conread position: 183-398
Cow position: chr29:22778393-22778165 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 35, 99

Conread position: 183-408
Cow position: chr29:6337451-6337683 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 33

Conread position: 183-413
Cow position: chr29:14484757-14484512 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 35, 94

Conread position: 183-413
Cow position: chr29:35677756-35677518 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 162
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 146, 61

Conread position: 184-408
Cow position: chr29:31489109-31489339 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 93

Conread position: 186-399
Cow position: chr29:41364901-41365122 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 32, 93

Conread position: 194-408
Cow position: chr29:11433922-11434139 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 19, 84

Conread position: 198-399
Cow position: chr29:28979676-28979487 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 20, 53

Conread position: 218-408
Cow position: chr29:4334555-4334746 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 115, 56

Conread position: 218-414
Cow position: chr29:10018401-10018605 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 5, 66

Conread position: 219-414
Cow position: chr29:5409318-5409115 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 232-408
Cow position: chr29:12025629-12025447 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 101, 42

Show alignments to all cow chromosomes.