Cow genome map

Conread name: rsug07_b12.y1

Conread position: 1-245
Cow position: chrX:12096614-12096369 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 190
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 7, 42

Conread position: 1-272
Cow position: chrX:29049609-29049874 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 41

Conread position: 1-279
Cow position: chrX:25283507-25283233 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 97

Conread position: 1-333
Cow position: chrX:38967285-38967615 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 10

Conread position: 1-349
Cow position: chrX:13868331-13868689 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 12

Conread position: 1-352
Cow position: chrX:11674688-11675052 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 251
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 32, 168

Conread position: 1-352
Cow position: chrX:34238354-34238704 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 25

Conread position: 1-352
Cow position: chrX:34564934-34565270 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 10

Conread position: 1-370
Cow position: chrX:35609620-35609998 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 12

Conread position: 1-392
Cow position: chrX:11581571-11581966 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 10

Conread position: 1-398
Cow position: chrX:15596679-15597066 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 12

Conread position: 1-398
Cow position: chrX:24105261-24105663 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 12

Conread position: 1-398
Cow position: chrX:27442918-27442518 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 10

Conread position: 1-399
Cow position: chrX:12115675-12116087 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 12

Conread position: 1-399
Cow position: chrX:17497730-17498125 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 10

Conread position: 1-399
Cow position: chrX:20340255-20339852 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 10

Conread position: 1-399
Cow position: chrX:27705227-27705626 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 12

Conread position: 1-400
Cow position: chrX:27516168-27516571 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 12

Conread position: 1-407
Cow position: chrX:38218352-38218762 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 10

Conread position: 1-408
Cow position: chrX:8796885-8797305 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 12

Conread position: 1-408
Cow position: chrX:21592920-21593336 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 10

Conread position: 1-408
Cow position: chrX:22812696-22813109 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 12

Conread position: 1-408
Cow position: chrX:35680978-35681391 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 12

Conread position: 1-413
Cow position: chrX:31250026-31250442 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 10

Conread position: 1-413
Cow position: chrX:34502557-34502974 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 13

Conread position: 1-413
Cow position: chrX:41879296-41878876 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 10

Conread position: 1-414
Cow position: chrX:6413680-6414102 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 5

Conread position: 1-414
Cow position: chrX:7695398-7695806 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 12

Conread position: 2-399
Cow position: chrX:31489147-31489560 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 9

Conread position: 3-272
Cow position: chrX:10916389-10916659 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 212

Conread position: 3-363
Cow position: chrX:42470301-42469948 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 10

Conread position: 3-398
Cow position: chrX:42171663-42171255 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 11

Conread position: 3-399
Cow position: chrX:917735-917328 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 163

Conread position: 3-399
Cow position: chrX:10831878-10831450 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 295

Conread position: 3-400
Cow position: chrX:40827111-40826710 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 10

Conread position: 3-405
Cow position: chrX:31729094-31729488 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 10

Conread position: 3-406
Cow position: chrX:47343928-47344343 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 10

Conread position: 3-408
Cow position: chrX:15139913-15139498 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 160

Conread position: 3-408
Cow position: chrX:30543647-30543235 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 283
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 118, 147

Conread position: 3-411
Cow position: chrX:41198722-41199158 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 307
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 95, 10

Conread position: 3-413
Cow position: chrX:7718493-7718903 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 16

Conread position: 4-392
Cow position: chrX:38439111-38439514 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 10

Conread position: 4-413
Cow position: chrX:42247540-42247128 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 131

Conread position: 5-275
Cow position: chrX:6906179-6905902 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 187
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 116, 155

Conread position: 5-285
Cow position: chrX:4630056-4629762 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 190
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 5-359
Cow position: chrX:32309738-32310098 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 255
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 122, 160

Conread position: 5-399
Cow position: chrX:4633214-4632818 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 99

Conread position: 6-358
Cow position: chrX:17271651-17271291 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 254
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 9, 37

Conread position: 6-392
Cow position: chrX:20697965-20697576 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 129

Conread position: 6-408
Cow position: chrX:3654246-3654657 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 282
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 136, 112

Conread position: 6-408
Cow position: chrX:5017768-5017362 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 132

Conread position: 6-408
Cow position: chrX:40452575-40452169 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 165

Conread position: 6-413
Cow position: chrX:14599174-14599591 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 57

Conread position: 6-414
Cow position: chrX:31949292-31948880 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 61

Conread position: 7-239
Cow position: chrX:22115643-22115407 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 182
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 114, 147

Conread position: 7-269
Cow position: chrX:32871147-32870876 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 153

Conread position: 7-297
Cow position: chrX:41733554-41733259 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 211
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 47, 158

Conread position: 7-320
Cow position: chrX:28111137-28111461 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 232
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 121, 19

Conread position: 7-324
Cow position: chrX:19290411-19290729 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 230
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 114, 153

Conread position: 7-324
Cow position: chrX:20582669-20582986 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 234
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 114, 153

Conread position: 7-327
Cow position: chrX:1055754-1055433 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 235
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 86, 165

Conread position: 7-330
Cow position: chrX:4123475-4123802 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 20

Conread position: 7-333
Cow position: chrX:1947082-1946744 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 236
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 120, 153

Conread position: 7-333
Cow position: chrX:6543895-6544222 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 162

Conread position: 7-333
Cow position: chrX:33855601-33855266 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 78

Conread position: 7-339
Cow position: chrX:34663221-34662875 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 250
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 29, 229

Conread position: 7-347
Cow position: chrX:630654-630324 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 252
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 185, 51

Conread position: 7-348
Cow position: chrX:35388268-35387917 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 151

Conread position: 7-350
Cow position: chrX:3653404-3653746 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 56

Conread position: 7-352
Cow position: chrX:10438012-10437679 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 116

Conread position: 7-352
Cow position: chrX:19019453-19019116 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 114

Conread position: 7-360
Cow position: chrX:38227451-38227097 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 159

Conread position: 7-363
Cow position: chrX:12249440-12249801 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 157

Conread position: 7-363
Cow position: chrX:38936338-38936696 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 155

Conread position: 7-364
Cow position: chrX:21665952-21665595 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 96

Conread position: 7-369
Cow position: chrX:45373644-45373286 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 248
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 114, 21

Conread position: 7-370
Cow position: chrX:36840506-36840875 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 256
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 116, 279

Conread position: 7-370
Cow position: chrX:42462109-42461738 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 155

Conread position: 7-371
Cow position: chrX:23299595-23299965 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 259
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 92, 28

Conread position: 7-383
Cow position: chrX:17794634-17794997 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 116

Conread position: 7-385
Cow position: chrX:37232050-37232433 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 114

Conread position: 7-385
Cow position: chrX:40269115-40269517 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 153

Conread position: 7-385
Cow position: chrX:45113275-45113643 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 113

Conread position: 7-385
Cow position: chrX:45501787-45502171 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 274
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 121, 159

Conread position: 7-395
Cow position: chrX:40481232-40480833 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 56

Conread position: 7-397
Cow position: chrX:10866228-10865836 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 153

Conread position: 7-397
Cow position: chrX:14884323-14883918 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 49

Conread position: 7-397
Cow position: chrX:37489357-37489757 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 165

Conread position: 7-398
Cow position: chrX:12309749-12309347 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 152

Conread position: 7-399
Cow position: chrX:13648145-13647745 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 153

Conread position: 7-399
Cow position: chrX:18695282-18694887 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 153

Conread position: 7-399
Cow position: chrX:25035747-25035342 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 106

Conread position: 7-399
Cow position: chrX:28133988-28134380 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 150

Conread position: 7-399
Cow position: chrX:38963750-38964148 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 151

Conread position: 7-399
Cow position: chrX:42994253-42994653 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 153

Conread position: 7-400
Cow position: chrX:34401637-34402041 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 84

Conread position: 7-402
Cow position: chrX:41743552-41743957 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 153

Conread position: 7-408
Cow position: chrX:5118844-5118453 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 92

Conread position: 7-408
Cow position: chrX:11082975-11082573 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 154

Conread position: 7-411
Cow position: chrX:8899664-8900079 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 12

Conread position: 7-413
Cow position: chrX:161067-161466 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 159

Conread position: 7-413
Cow position: chrX:5871952-5872371 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 153

Conread position: 7-413
Cow position: chrX:7571542-7571959 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 164

Conread position: 7-413
Cow position: chrX:11073566-11073137 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 273

Conread position: 7-413
Cow position: chrX:15147542-15147139 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 28

Conread position: 7-413
Cow position: chrX:28847237-28846839 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 150

Conread position: 7-413
Cow position: chrX:34441808-34441400 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 150

Conread position: 7-413
Cow position: chrX:44054443-44054856 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 23

Conread position: 7-413
Cow position: chrX:46532881-46532441 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 164

Conread position: 7-414
Cow position: chrX:11655717-11656136 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 283

Conread position: 7-414
Cow position: chrX:13785739-13785305 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 170

Conread position: 7-414
Cow position: chrX:41192328-41192759 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 296
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 18, 151

Conread position: 8-289
Cow position: chrX:3161376-3161090 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 207
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 113, 272

Conread position: 8-289
Cow position: chrX:40515546-40515823 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 205
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 129, 25

Conread position: 8-320
Cow position: chrX:7381964-7382288 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 77

Conread position: 8-333
Cow position: chrX:6655626-6655295 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 226
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 120, 34

Conread position: 8-333
Cow position: chrX:31260991-31260660 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 240
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 113, 153

Conread position: 8-347
Cow position: chrX:32743178-32743519 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 240
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 113, 152

Conread position: 8-366
Cow position: chrX:10301985-10302340 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 239
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 129, 35

Conread position: 8-370
Cow position: chrX:1616411-1616039 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 155

Conread position: 8-395
Cow position: chrX:24288273-24287895 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 263
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 135, 149

Conread position: 8-413
Cow position: chrX:11718138-11717729 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 32

Conread position: 9-294
Cow position: chrX:25848556-25848853 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 199
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 112, 291

Conread position: 9-325
Cow position: chrX:13177816-13177509 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 228
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 89, 110

Conread position: 9-326
Cow position: chrX:35937428-35937120 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 225
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 206, 128

Conread position: 9-413
Cow position: chrX:37843361-37843773 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 151

Conread position: 12-400
Cow position: chrX:45089081-45089487 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 283
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 81, 93

Conread position: 13-272
Cow position: chrX:2524085-2523815 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 204
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 108, 153

Conread position: 13-408
Cow position: chrX:19689860-19690264 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 292
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 87, 43

Conread position: 14-398
Cow position: chrX:35409314-35409691 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 149

Conread position: 15-333
Cow position: chrX:24424745-24424421 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 226
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 106, 81

Conread position: 15-397
Cow position: chrX:16790176-16789817 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 274
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 47, 91

Conread position: 15-413
Cow position: chrX:31443173-31442775 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 72

Conread position: 15-414
Cow position: chrX:9252527-9252108 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 115

Conread position: 16-345
Cow position: chrX:25337824-25338167 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 247
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 8, 147

Conread position: 16-369
Cow position: chrX:47967248-47967604 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 149

Conread position: 17-289
Cow position: chrX:9227335-9227049 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 202
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 105, 147

Conread position: 18-408
Cow position: chrX:42492880-42492474 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 285

Conread position: 20-392
Cow position: chrX:44396672-44397048 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 259
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 92, 87

Conread position: 20-399
Cow position: chrX:31436132-31436514 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 140

Conread position: 21-279
Cow position: chrX:25302100-25301834 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 187
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 9, 119

Conread position: 21-400
Cow position: chrX:15485972-15485594 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 142

Conread position: 21-407
Cow position: chrX:46771319-46770915 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 139

Conread position: 21-414
Cow position: chrX:23564144-23563736 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 145

Conread position: 22-290
Cow position: chrX:43648090-43647814 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 191
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 107, 0

Conread position: 23-333
Cow position: chrX:7054080-7053763 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 221
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 99, 136

Conread position: 24-330
Cow position: chrX:41403617-41403943 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 236
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 97, 147

Conread position: 24-330
Cow position: chrX:41410165-41410491 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 236
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 97, 147

Conread position: 24-384
Cow position: chrX:47481456-47481825 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 258
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 97, 58

Conread position: 26-414
Cow position: chrX:40558018-40557624 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 140

Conread position: 28-352
Cow position: chrX:47054858-47054538 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 232
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 8, 94

Conread position: 28-399
Cow position: chrX:36778065-36778448 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 140

Conread position: 32-398
Cow position: chrX:38007104-38006727 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 30

Conread position: 35-267
Cow position: chrX:45421006-45420763 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 182
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 86, 13

Conread position: 35-397
Cow position: chrX:43527169-43527546 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 125

Conread position: 35-398
Cow position: chrX:10412319-10411947 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 125

Conread position: 35-399
Cow position: chrX:6234767-6234410 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 265
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 190, 33

Conread position: 35-413
Cow position: chrX:7645925-7646305 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 187

Conread position: 35-413
Cow position: chrX:26626018-26625617 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 284
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 92, 133

Conread position: 41-316
Cow position: chrX:42855084-42855365 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 116

Conread position: 41-415
Cow position: chrX:7508800-7509199 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 281
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 86, 20

Conread position: 42-400
Cow position: chrX:15545571-15545923 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 124

Conread position: 44-333
Cow position: chrX:36692911-36693203 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 207
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 77, 116

Conread position: 45-360
Cow position: chrX:25713486-25713787 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 220
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 169, 49

Conread position: 46-399
Cow position: chrX:9161266-9161621 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 245
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 75, 114

Conread position: 47-279
Cow position: chrX:26619682-26619444 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 74, 21

Conread position: 49-366
Cow position: chrX:34990722-34991036 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 233
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 72, 111

Conread position: 49-399
Cow position: chrX:44873860-44873517 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 240
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 124, 63

Conread position: 52-279
Cow position: chrX:33822788-33823020 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 70, 27

Conread position: 52-413
Cow position: chrX:28845528-28845887 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 118

Conread position: 54-413
Cow position: chrX:7350988-7351354 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 109

Conread position: 55-276
Cow position: chrX:45976556-45976791 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 174
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 11, 178

Conread position: 60-363
Cow position: chrX:20709767-20710072 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 223
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 158, 96

Conread position: 60-395
Cow position: chrX:19188628-19188967 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 100

Conread position: 60-400
Cow position: chrX:14924692-14925041 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 106

Conread position: 60-400
Cow position: chrX:47873649-47873295 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 247
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 61, 100

Conread position: 62-392
Cow position: chrX:33466311-33466641 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 88

Conread position: 66-413
Cow position: chrX:30133626-30133264 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 255
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 55, 100

Conread position: 68-333
Cow position: chrX:33020186-33020451 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 206
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 53, 92

Conread position: 69-325
Cow position: chrX:35273045-35273314 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 195
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 52, 222

Conread position: 69-413
Cow position: chrX:1176273-1175928 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 236
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 151, 52

Conread position: 70-395
Cow position: chrX:19015144-19015473 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 90

Conread position: 70-413
Cow position: chrX:41238661-41238300 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 257
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 68, 58

Conread position: 76-399
Cow position: chrX:35041930-35042258 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 235
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 66, 81

Conread position: 77-272
Cow position: chrX:48675785-48675987 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 38, 90

Conread position: 77-352
Cow position: chrX:25237887-25238159 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 82

Conread position: 78-330
Cow position: chrX:44835106-44834845 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 181
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 41, 88

Conread position: 79-399
Cow position: chrX:22482978-22482657 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 231
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 42, 89

Conread position: 80-400
Cow position: chrX:46723029-46722693 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 242
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 42, 86

Conread position: 82-400
Cow position: chrX:48195327-48194994 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 236
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 39, 84

Conread position: 82-413
Cow position: chrX:31294826-31294518 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 240
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 59, 45

Conread position: 85-414
Cow position: chrX:2467597-2467939 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 48

Conread position: 86-408
Cow position: chrX:16762490-16762820 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 73

Conread position: 87-398
Cow position: chrX:42874697-42875022 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 73

Conread position: 88-352
Cow position: chrX:45693826-45694091 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 183
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 33, 72

Conread position: 88-396
Cow position: chrX:9997611-9997297 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 234
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 30, 68

Conread position: 88-399
Cow position: chrX:40647698-40648026 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 238
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 30, 72

Conread position: 88-413
Cow position: chrX:8730799-8731148 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 250
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 33, 78

Conread position: 92-293
Cow position: chrX:16531723-16531928 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 29, 68

Conread position: 92-392
Cow position: chrX:35413354-35413651 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 229
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 29, 70

Conread position: 93-352
Cow position: chrX:47191670-47191422 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 180
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 43, 35

Conread position: 95-333
Cow position: chrX:40183623-40183376 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 190
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 26, 71

Conread position: 96-413
Cow position: chrX:12018003-12018346 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 244
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 25, 64

Conread position: 103-369
Cow position: chrX:488225-488492 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 183
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 18, 198

Conread position: 103-385
Cow position: chrX:8925441-8925725 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 211
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 34, 116

Conread position: 103-398
Cow position: chrX:34270151-34270441 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 212
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 39, 47

Conread position: 109-369
Cow position: chrX:20151591-20151857 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 202
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 12, 51

Conread position: 114-347
Cow position: chrX:32020373-32020135 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 49

Conread position: 114-351
Cow position: chrX:25816147-25815920 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 181
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 23, 43

Conread position: 114-408
Cow position: chrX:28878413-28878125 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 106

Conread position: 115-384
Cow position: chrX:23497913-23497642 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 216
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 22, 42

Conread position: 115-413
Cow position: chrX:27509270-27508968 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 221
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 22, 48

Conread position: 115-413
Cow position: chrX:45404084-45403771 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 222
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 22, 48

Conread position: 116-283
Cow position: chrX:45787405-45787572 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 20, 47

Conread position: 123-325
Cow position: chrX:40035693-40035484 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 19, 137

Conread position: 123-352
Cow position: chrX:35284375-35284609 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 178
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 19, 100

Conread position: 123-383
Cow position: chrX:16541917-16541655 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 195
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 94, 40

Conread position: 124-352
Cow position: chrX:40116186-40116404 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 174
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 94, 11

Conread position: 124-413
Cow position: chrX:17662840-17662541 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 220
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 17, 35

Conread position: 126-374
Cow position: chrX:7497008-7497253 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 190
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 90, 9

Conread position: 126-390
Cow position: chrX:44053019-44053291 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 195
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 10, 31

Conread position: 126-400
Cow position: chrX:32419971-32420256 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 209
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 11, 157

Conread position: 126-414
Cow position: chrX:26876120-26875826 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 218
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 11, 36

Conread position: 127-345
Cow position: chrX:27176556-27176334 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 91, 8

Conread position: 127-352
Cow position: chrX:9416929-9416703 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 178
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 90, 8

Conread position: 127-413
Cow position: chrX:41167200-41166908 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 217
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 90, 8

Conread position: 127-413
Cow position: chrX:46073060-46072763 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 215
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 5, 30

Conread position: 130-395
Cow position: chrX:27394249-27393990 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 201
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 7, 27

Conread position: 130-399
Cow position: chrX:21672318-21672594 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 209
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 87, 5

Conread position: 131-278
Cow position: chrX:18812025-18812170 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 87, 23

Conread position: 131-333
Cow position: chrX:48010360-48010568 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 147
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 6, 32

Conread position: 131-408
Cow position: chrX:9635415-9635141 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 210
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 10, 26

Conread position: 131-413
Cow position: chrX:11856195-11856484 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 222
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 11, 26

Conread position: 131-414
Cow position: chrX:30963106-30962822 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 212
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 6, 32

Conread position: 132-392
Cow position: chrX:37048813-37048548 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 187
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 85, 32

Conread position: 133-320
Cow position: chrX:4942981-4942800 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 29, 0

Conread position: 134-399
Cow position: chrX:11589822-11589548 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 200
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 30, 146

Conread position: 135-318
Cow position: chrX:6639895-6640082 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 152
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 85, 21

Conread position: 135-333
Cow position: chrX:7721755-7721956 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 82, 27

Conread position: 135-333
Cow position: chrX:19930427-19930618 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 83, 21

Conread position: 135-333
Cow position: chrX:30921956-30922153 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 86, 29

Conread position: 135-334
Cow position: chrX:2206773-2206582 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 90, 21

Conread position: 135-347
Cow position: chrX:7513287-7513494 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 83, 21

Conread position: 135-397
Cow position: chrX:27680174-27680436 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 197
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 88, 21

Conread position: 135-399
Cow position: chrX:23514247-23513975 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 212
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 74, 21

Conread position: 135-399
Cow position: chrX:35542662-35542935 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 205
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 83, 27

Conread position: 135-408
Cow position: chrX:5900228-5900515 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 205
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 82, 32

Conread position: 135-408
Cow position: chrX:38549219-38549494 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 210
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 82, 21

Conread position: 135-413
Cow position: chrX:34543558-34543838 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 213
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 67, 27

Conread position: 135-413
Cow position: chrX:36975720-36976005 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 205
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 82, 27

Conread position: 135-414
Cow position: chrX:33493546-33493834 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 199
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 83, 21

Conread position: 137-399
Cow position: chrX:22074573-22074836 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 190
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 80, 19

Conread position: 139-324
Cow position: chrX:16324188-16324006 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 145
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 86, 12

Conread position: 140-300
Cow position: chrX:48536889-48536728 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 78, 22

Conread position: 140-320
Cow position: chrX:4750522-4750350 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 78, 16

Conread position: 140-321
Cow position: chrX:42499253-42499073 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 77, 16

Conread position: 140-333
Cow position: chrX:25411616-25411808 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 73, 16

Conread position: 140-334
Cow position: chrX:48684447-48684257 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 85, 16

Conread position: 140-354
Cow position: chrX:11455276-11455056 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 87, 21

Conread position: 140-363
Cow position: chrX:17042466-17042692 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 74, 16

Conread position: 140-363
Cow position: chrX:44961523-44961748 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 78, 27

Conread position: 140-399
Cow position: chrX:619232-618962 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 204
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 78, 16

Conread position: 140-399
Cow position: chrX:9855076-9855338 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 195
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 77, 25

Conread position: 140-399
Cow position: chrX:9953917-9954179 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 196
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 80, 24

Conread position: 140-399
Cow position: chrX:14900945-14900690 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 191
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 77, 16

Conread position: 140-400
Cow position: chrX:21642702-21642441 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 183
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 80, 16

Conread position: 140-400
Cow position: chrX:29509668-29509397 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 208
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 80, 26

Conread position: 140-401
Cow position: chrX:39558572-39558306 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 201
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 77, 23

Conread position: 140-405
Cow position: chrX:43049118-43049389 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 198
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 78, 140

Conread position: 140-408
Cow position: chrX:16416284-16416558 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 204
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 80, 22

Conread position: 140-414
Cow position: chrX:38935057-38935334 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 203
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 79, 22

Conread position: 141-399
Cow position: chrX:6265809-6265558 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 191, 15

Conread position: 141-399
Cow position: chrX:6278729-6278458 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 208
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 76, 21

Conread position: 141-408
Cow position: chrX:6488363-6488628 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 206
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 180, 15

Conread position: 141-413
Cow position: chrX:1514624-1514358 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 194
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 219, 15

Conread position: 141-413
Cow position: chrX:9201324-9201602 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 199
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 71, 23

Conread position: 141-414
Cow position: chrX:38642037-38642304 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 195
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 77, 15

Conread position: 142-327
Cow position: chrX:12980053-12979863 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 76, 14

Conread position: 142-360
Cow position: chrX:1503117-1503332 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 63, 14

Conread position: 143-318
Cow position: chrX:23091660-23091840 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 74, 13

Conread position: 143-325
Cow position: chrX:45015364-45015538 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 13, 0

Conread position: 143-413
Cow position: chrX:11633457-11633736 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 206
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 75, 19

Conread position: 144-349
Cow position: chrX:36283125-36283338 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 75, 12

Conread position: 144-413
Cow position: chrX:29602053-29601774 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 218
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 74, 28

Conread position: 147-311
Cow position: chrX:25036918-25036750 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 70, 16

Conread position: 148-325
Cow position: chrX:46430075-46429899 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 73, 15

Conread position: 148-399
Cow position: chrX:46587599-46587862 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 192
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 73, 141

Conread position: 152-327
Cow position: chrX:27174782-27174957 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 79, 12

Conread position: 153-333
Cow position: chrX:40809472-40809656 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 130
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 17, 137

Conread position: 153-414
Cow position: chrX:16996293-16996547 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 182
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 83, 131

Conread position: 155-413
Cow position: chrX:47046731-47046455 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 188
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 155-414
Cow position: chrX:38852985-38853253 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 182
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 59, 121

Conread position: 156-413
Cow position: chrX:3579734-3579998 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 193
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 64, 122

Conread position: 156-413
Cow position: chrX:9425952-9425689 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 191
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 64, 99

Conread position: 157-397
Cow position: chrX:40567390-40567636 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 179
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 61, 163

Conread position: 157-414
Cow position: chrX:29542428-29542162 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 188
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 61, 120

Conread position: 158-370
Cow position: chrX:34411631-34411846 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 10, 111

Conread position: 158-398
Cow position: chrX:23970180-23970418 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 67, 60

Conread position: 159-348
Cow position: chrX:46315588-46315392 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 59, 119

Conread position: 159-400
Cow position: chrX:26285772-26286022 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 184
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 59, 128

Conread position: 160-398
Cow position: chrX:45993006-45993265 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 184
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 115

Conread position: 160-414
Cow position: chrX:841952-842212 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 186
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 71, 125

Conread position: 161-324
Cow position: chrX:29770384-29770215 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 133

Conread position: 161-392
Cow position: chrX:39938728-39938490 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 56, 120

Conread position: 161-408
Cow position: chrX:27772165-27771916 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 185
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 59, 33

Conread position: 163-399
Cow position: chrX:29545083-29544837 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 178
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 54, 115

Conread position: 165-408
Cow position: chrX:1499468-1499714 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 60, 53

Conread position: 167-333
Cow position: chrX:7336629-7336796 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 10

Conread position: 167-400
Cow position: chrX:4091448-4091681 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 180
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 39, 74

Conread position: 168-399
Cow position: chrX:12405575-12405341 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 166, 39

Conread position: 168-406
Cow position: chrX:47301102-47300856 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 173
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 42, 121

Conread position: 169-399
Cow position: chrX:36961438-36961681 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 183
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 45, 207

Conread position: 169-399
Cow position: chrX:37781315-37781069 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 180
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 49, 115

Conread position: 169-414
Cow position: chrX:33000706-33000960 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 190
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 51, 95

Conread position: 171-406
Cow position: chrX:47484467-47484217 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 170
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 49, 122

Conread position: 176-412
Cow position: chrX:31311835-31312082 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 174
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 41, 105

Conread position: 176-414
Cow position: chrX:23785463-23785702 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 185
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 42, 175

Conread position: 177-389
Cow position: chrX:31252228-31252447 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 102

Conread position: 183-414
Cow position: chrX:36067836-36068070 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 43, 76

Conread position: 184-395
Cow position: chrX:32820847-32821065 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 34, 11

Conread position: 188-414
Cow position: chrX:36060973-36061215 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 167
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 32, 104

Conread position: 189-392
Cow position: chrX:47186498-47186291 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 87

Conread position: 190-408
Cow position: chrX:47166061-47165839 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 20, 98

Conread position: 193-399
Cow position: chrX:22387421-22387206 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 25, 90

Conread position: 201-399
Cow position: chrX:41992207-41992006 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 43, 19

Conread position: 202-413
Cow position: chrX:27227962-27228180 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 15, 151

Conread position: 216-413
Cow position: chrX:29680406-29680207 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 117, 57

Conread position: 217-398
Cow position: chrX:29723596-29723779 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 116, 55

Conread position: 218-397
Cow position: chrX:25207987-25207817 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 218-408
Cow position: chrX:34792451-34792262 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 117, 30

Conread position: 224-385
Cow position: chrX:616400-616233 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 111, 50

Conread position: 225-408
Cow position: chrX:11085194-11085014 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 110, 59

Conread position: 225-408
Cow position: chrX:42873255-42873436 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 152, 31

Conread position: 226-413
Cow position: chrX:7710679-7710485 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 231-413
Cow position: chrX:9365806-9365622 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 101, 41

Conread position: 233-413
Cow position: chrX:38728608-38728788 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 100, 41

Conread position: 236-408
Cow position: chrX:19003174-19003346 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 97, 46

Conread position: 244-395
Cow position: chrX:5679684-5679533 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 83, 30

Show alignments to all cow chromosomes.