Cow genome map

Conread name: rsug18_k19.y1

Conread position: 327-532
Cow position: chr1:101525957-101525753 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 142
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 65, 27

Conread position: 339-525
Cow position: chr1:21681559-21681374 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 145

Conread position: 339-533
Cow position: chr1:101280759-101280569 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 8, 57

Conread position: 340-532
Cow position: chr1:6381751-6381943 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 148
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 54, 109

Conread position: 341-551
Cow position: chr1:44814690-44814473 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 7

Conread position: 342-485
Cow position: chr1:19304552-19304695 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 9, 80

Conread position: 342-532
Cow position: chr1:4391298-4391101 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 152

Conread position: 342-551
Cow position: chr1:73719440-73719661 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 343-531
Cow position: chr1:89076652-89076455 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 345-481
Cow position: chr1:3914934-3914798 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 345-483
Cow position: chr1:11729159-11729298 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 345-483
Cow position: chr1:43311788-43311648 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 345-484
Cow position: chr1:42360270-42360412 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 345-485
Cow position: chr1:72105396-72105531 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 345-532
Cow position: chr1:6394541-6394724 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 144

Conread position: 345-537
Cow position: chr1:101268017-101267830 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 50, 34

Conread position: 345-551
Cow position: chr1:64804118-64803907 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 160
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 49, 0

Conread position: 345-551
Cow position: chr1:73458111-73457904 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 107, 31

Conread position: 346-548
Cow position: chr1:31607903-31607704 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 46, 56

Conread position: 347-493
Cow position: chr1:86073580-86073729 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 6, 0

Conread position: 347-498
Cow position: chr1:57420745-57420598 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 47, 84

Conread position: 348-477
Cow position: chr1:42868949-42868823 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 348-478
Cow position: chr1:45223568-45223699 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 348-478
Cow position: chr1:65881794-65881923 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 46, 76

Conread position: 348-478
Cow position: chr1:69940836-69940705 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 348-483
Cow position: chr1:3923813-3923677 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 348-483
Cow position: chr1:54157281-54157419 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 348-483
Cow position: chr1:68672610-68672479 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 348-483
Cow position: chr1:78697784-78697649 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 22

Conread position: 348-483
Cow position: chr1:82880633-82880767 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 348-483
Cow position: chr1:95153210-95153345 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 29

Conread position: 348-483
Cow position: chr1:97696734-97696867 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 47, 53

Conread position: 348-483
Cow position: chr1:100551957-100552098 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 348-484
Cow position: chr1:56832788-56832655 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 46, 80

Conread position: 348-484
Cow position: chr1:61011168-61011305 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 348-484
Cow position: chr1:102648265-102648402 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 348-485
Cow position: chr1:74927871-74928009 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 46, 0

Conread position: 348-491
Cow position: chr1:10778550-10778694 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 348-493
Cow position: chr1:242544-242690 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 348-495
Cow position: chr1:4032619-4032767 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 46, 0

Conread position: 348-495
Cow position: chr1:32001326-32001184 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 128, 46

Conread position: 348-495
Cow position: chr1:55229963-55230111 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 348-499
Cow position: chr1:53308402-53308255 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 46, 70

Conread position: 348-503
Cow position: chr1:45478872-45478720 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 348-504
Cow position: chr1:2317391-2317230 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 348-504
Cow position: chr1:8347110-8347267 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 348-504
Cow position: chr1:80336262-80336104 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 348-522
Cow position: chr1:874641-874814 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 43, 154

Conread position: 348-531
Cow position: chr1:90976101-90975910 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 46, 115

Conread position: 348-532
Cow position: chr1:19515632-19515450 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 46, 171

Conread position: 348-532
Cow position: chr1:38706867-38706685 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 146
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 45, 133

Conread position: 348-532
Cow position: chr1:46245762-46245569 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 101

Conread position: 348-532
Cow position: chr1:67529042-67529223 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 46, 142

Conread position: 348-532
Cow position: chr1:71228080-71228262 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 129
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 46, 58

Conread position: 348-532
Cow position: chr1:72422421-72422239 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 147
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 46, 77

Conread position: 348-532
Cow position: chr1:75250102-75250279 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 348-532
Cow position: chr1:76613148-76612965 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 130
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 45, 152

Conread position: 348-532
Cow position: chr1:77739709-77739891 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 145
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 46, 115

Conread position: 348-532
Cow position: chr1:81390909-81391089 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 46, 83

Conread position: 348-532
Cow position: chr1:81858915-81858734 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 24, 135

Conread position: 348-532
Cow position: chr1:94226567-94226377 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 46, 36

Conread position: 348-532
Cow position: chr1:99609358-99609534 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 32, 37

Conread position: 348-533
Cow position: chr1:57089692-57089510 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 145
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 46, 100

Conread position: 348-538
Cow position: chr1:28563579-28563389 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 57, 46

Conread position: 348-545
Cow position: chr1:45007451-45007653 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 183

Conread position: 348-549
Cow position: chr1:36688391-36688192 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 50, 109

Conread position: 348-551
Cow position: chr1:16061017-16060818 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 128

Conread position: 348-551
Cow position: chr1:34771516-34771309 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 348-551
Cow position: chr1:54258554-54258759 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 164
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 46, 83

Conread position: 348-551
Cow position: chr1:90267708-90267914 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 159
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 47, 28

Conread position: 348-551
Cow position: chr1:95618629-95618831 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 131

Conread position: 348-551
Cow position: chr1:95835811-95835605 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 159
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 46, 140

Conread position: 348-551
Cow position: chr1:96081467-96081668 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 46, 82

Conread position: 348-551
Cow position: chr1:97231947-97232161 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 47, 0

Conread position: 349-493
Cow position: chr1:51860574-51860428 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 349-521
Cow position: chr1:102468629-102468458 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 44, 139

Conread position: 349-532
Cow position: chr1:2976008-2975822 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 41, 0

Conread position: 349-532
Cow position: chr1:53520899-53521081 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 44, 140

Conread position: 349-532
Cow position: chr1:88359866-88360052 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 349-551
Cow position: chr1:55428969-55428763 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 160
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 34, 148

Conread position: 349-551
Cow position: chr1:78809864-78810070 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 350-532
Cow position: chr1:51435767-51435949 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 12, 156

Conread position: 350-549
Cow position: chr1:81364250-81364451 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 44, 15

Conread position: 352-470
Cow position: chr1:77683343-77683462 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 352-478
Cow position: chr1:83301961-83301832 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 352-482
Cow position: chr1:77880739-77880613 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 352-483
Cow position: chr1:72011822-72011690 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 352-483
Cow position: chr1:81580169-81580300 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 57

Conread position: 352-532
Cow position: chr1:49980701-49980875 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 42, 64

Conread position: 352-532
Cow position: chr1:72068844-72068664 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 142
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 42, 135

Conread position: 352-533
Cow position: chr1:26895821-26895644 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 14, 126

Conread position: 352-550
Cow position: chr1:22823896-22824098 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 161
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 42, 143

Conread position: 353-482
Cow position: chr1:64019529-64019399 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 353-484
Cow position: chr1:42178737-42178869 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 353-489
Cow position: chr1:98576039-98576176 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 353-532
Cow position: chr1:49082735-49082913 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 41, 135

Conread position: 354-483
Cow position: chr1:22035604-22035734 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 354-483
Cow position: chr1:22461246-22461115 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 7, 0

Conread position: 354-483
Cow position: chr1:84768886-84768756 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 354-495
Cow position: chr1:20864050-20864188 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 354-495
Cow position: chr1:34300558-34300416 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 354-507
Cow position: chr1:86057079-86056928 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 40, 64

Conread position: 354-530
Cow position: chr1:66898505-66898329 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 41, 135

Conread position: 354-532
Cow position: chr1:52435265-52435442 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 41, 131

Conread position: 354-532
Cow position: chr1:95152864-95153041 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 40, 134

Conread position: 354-533
Cow position: chr1:87197813-87197988 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 127
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 38, 132

Conread position: 354-538
Cow position: chr1:759425-759240 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 129
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 354-550
Cow position: chr1:96019223-96019417 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 177, 39

Conread position: 357-551
Cow position: chr1:89448896-89449088 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 37, 129

Conread position: 358-551
Cow position: chr1:72813613-72813807 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 37, 130

Conread position: 359-478
Cow position: chr1:6972524-6972644 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 359-495
Cow position: chr1:80422274-80422409 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 120, 35

Conread position: 359-499
Cow position: chr1:82877183-82877323 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 35, 127

Conread position: 359-499
Cow position: chr1:92603017-92603158 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 359-503
Cow position: chr1:24791948-24791803 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 359-532
Cow position: chr1:6031622-6031794 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 32, 136

Conread position: 359-532
Cow position: chr1:52496770-52496940 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 35, 8

Conread position: 359-532
Cow position: chr1:84104063-84103891 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 32, 129

Conread position: 359-532
Cow position: chr1:97717574-97717409 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 81

Conread position: 359-533
Cow position: chr1:11489163-11488988 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 25, 129

Conread position: 359-533
Cow position: chr1:45315638-45315463 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 33, 0

Conread position: 359-534
Cow position: chr1:85688176-85688355 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 34, 70

Conread position: 359-549
Cow position: chr1:53370083-53370272 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 175, 31

Conread position: 359-551
Cow position: chr1:43872321-43872119 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 36, 59

Conread position: 359-551
Cow position: chr1:73020664-73020472 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 35, 129

Conread position: 360-520
Cow position: chr1:61846143-61846307 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 32, 69

Conread position: 360-532
Cow position: chr1:1878019-1878190 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 34, 124

Conread position: 360-532
Cow position: chr1:5751312-5751482 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 34, 124

Conread position: 360-533
Cow position: chr1:73551511-73551334 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 360-550
Cow position: chr1:92792051-92792241 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 34, 18

Conread position: 361-532
Cow position: chr1:23633932-23633760 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 127

Conread position: 361-533
Cow position: chr1:6731180-6731347 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 32, 124

Conread position: 362-483
Cow position: chr1:32014199-32014319 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 29, 17

Conread position: 362-532
Cow position: chr1:69691714-69691545 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 17, 30

Conread position: 362-550
Cow position: chr1:53374434-53374616 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 32, 69

Conread position: 363-483
Cow position: chr1:76739908-76739787 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 363-496
Cow position: chr1:60821-60958 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 363-532
Cow position: chr1:26201238-26201402 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 71, 31

Conread position: 363-532
Cow position: chr1:50765614-50765781 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 140, 0

Conread position: 366-478
Cow position: chr1:4027439-4027552 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 366-492
Cow position: chr1:25022070-25021943 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 367-532
Cow position: chr1:34001053-34001210 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 27, 117

Conread position: 368-482
Cow position: chr1:45673763-45673876 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 368-483
Cow position: chr1:64706500-64706615 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 61

Conread position: 368-487
Cow position: chr1:20537212-20537332 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 368-492
Cow position: chr1:77954290-77954170 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 368-503
Cow position: chr1:57359471-57359605 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 22, 0

Conread position: 368-524
Cow position: chr1:43148538-43148380 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 368-532
Cow position: chr1:31630280-31630116 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 26, 128

Conread position: 368-550
Cow position: chr1:731969-731781 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 20, 0

Conread position: 369-531
Cow position: chr1:78030024-78029860 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 369-533
Cow position: chr1:49297659-49297819 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 25, 105

Conread position: 369-551
Cow position: chr1:12090358-12090531 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 369-551
Cow position: chr1:47886471-47886290 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 24, 17

Conread position: 369-551
Cow position: chr1:60603569-60603380 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 150
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 24, 0

Conread position: 369-551
Cow position: chr1:95049856-95049675 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 165, 25

Conread position: 370-499
Cow position: chr1:46100831-46100701 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 370-532
Cow position: chr1:68710288-68710451 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 24, 12

Conread position: 370-532
Cow position: chr1:98557110-98556951 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 24, 115

Conread position: 370-533
Cow position: chr1:99637245-99637083 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 25, 135

Conread position: 370-551
Cow position: chr1:38419032-38419216 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 22, 0

Conread position: 370-551
Cow position: chr1:46172614-46172795 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 24, 104

Conread position: 371-487
Cow position: chr1:81638558-81638675 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 373-532
Cow position: chr1:39684132-39683975 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 21, 76

Conread position: 373-532
Cow position: chr1:77685969-77685811 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 21, 113

Conread position: 374-499
Cow position: chr1:36018764-36018644 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 374-532
Cow position: chr1:64457978-64458139 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 21, 57

Conread position: 374-533
Cow position: chr1:73534628-73534471 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 20, 96

Conread position: 374-533
Cow position: chr1:94823379-94823221 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 20, 131

Conread position: 375-550
Cow position: chr1:1347621-1347445 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 19, 119

Conread position: 376-532
Cow position: chr1:40181610-40181454 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 127

Conread position: 378-551
Cow position: chr1:102797982-102797810 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 5, 111

Conread position: 379-532
Cow position: chr1:54569716-54569868 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 14, 109

Conread position: 379-551
Cow position: chr1:26984028-26984202 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 155, 108

Conread position: 380-532
Cow position: chr1:53402800-53402951 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 23, 118

Conread position: 382-532
Cow position: chr1:79178649-79178798 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 12, 102

Conread position: 382-551
Cow position: chr1:46004302-46004464 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 94

Conread position: 383-503
Cow position: chr1:49299686-49299805 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 383-522
Cow position: chr1:67539583-67539719 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 114
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 22, 0

Conread position: 383-532
Cow position: chr1:23372881-23373028 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 11, 98

Conread position: 383-532
Cow position: chr1:43296696-43296547 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 383-551
Cow position: chr1:78034882-78034715 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 11, 61

Conread position: 383-551
Cow position: chr1:84815153-84815325 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 152, 0

Conread position: 384-504
Cow position: chr1:68245294-68245175 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 109, 6

Conread position: 384-532
Cow position: chr1:1802192-1802337 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 386-507
Cow position: chr1:28985540-28985419 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 63

Conread position: 386-530
Cow position: chr1:100512920-100513062 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 20, 10

Conread position: 390-520
Cow position: chr1:37543756-37543628 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 97, 0

Conread position: 394-532
Cow position: chr1:46795792-46795925 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 405-532
Cow position: chr1:42796922-42797046 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 409-551
Cow position: chr1:31806910-31807048 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 417-532
Cow position: chr1:73398017-73397904 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 0

Show alignments to all cow chromosomes.