Cow genome map

Conread name: rsug18_k19.y1

Conread position: 340-536
Cow position:
Alignm length: 198
Alignm identity: 150
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 54, 136

Conread position: 342-471
Cow position:
Alignm length: 133
Alignm identity: 106
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 342-528
Cow position:
Alignm length: 189
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 5, 88

Conread position: 343-489
Cow position:
Alignm length: 150
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 345-476
Cow position:
Alignm length: 134
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 71

Conread position: 345-504
Cow position:
Alignm length: 161
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 345-511
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 345-532
Cow position:
Alignm length: 189
Alignm identity: 145
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 131, 85

Conread position: 345-532
Cow position:
Alignm length: 188
Alignm identity: 140
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 47, 0

Conread position: 345-532
Cow position:
Alignm length: 189
Alignm identity: 140
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 49, 139

Conread position: 345-551
Cow position:
Alignm length: 212
Alignm identity: 154
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 5, 51

Conread position: 346-504
Cow position:
Alignm length: 160
Alignm identity: 118
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 46, 131

Conread position: 346-532
Cow position:
Alignm length: 188
Alignm identity: 141
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 45, 7

Conread position: 346-532
Cow position:
Alignm length: 188
Alignm identity: 138
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 46, 144

Conread position: 348-471
Cow position:
Alignm length: 125
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 348-472
Cow position:
Alignm length: 126
Alignm identity: 102
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 44, 0

Conread position: 348-473
Cow position:
Alignm length: 126
Alignm identity: 100
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 348-478
Cow position:
Alignm length: 132
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 63, 46

Conread position: 348-478
Cow position:
Alignm length: 135
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 348-478
Cow position:
Alignm length: 132
Alignm identity: 105
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 348-478
Cow position:
Alignm length: 132
Alignm identity: 105
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 348-480
Cow position:
Alignm length: 136
Alignm identity: 108
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 26, 0

Conread position: 348-481
Cow position:
Alignm length: 135
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 81

Conread position: 348-482
Cow position:
Alignm length: 136
Alignm identity: 105
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 46, 11

Conread position: 348-482
Cow position:
Alignm length: 139
Alignm identity: 107
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 348-482
Cow position:
Alignm length: 136
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 348-483
Cow position:
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 70

Conread position: 348-483
Cow position:
Alignm length: 137
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 348-483
Cow position:
Alignm length: 137
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 348-483
Cow position:
Alignm length: 136
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 348-493
Cow position:
Alignm length: 148
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 43, 62

Conread position: 348-497
Cow position:
Alignm length: 151
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 348-499
Cow position:
Alignm length: 153
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 91

Conread position: 348-500
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 348-501
Cow position:
Alignm length: 162
Alignm identity: 124
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 348-502
Cow position:
Alignm length: 155
Alignm identity: 121
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 348-504
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 348-509
Cow position:
Alignm length: 164
Alignm identity: 126
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 54, 46

Conread position: 348-517
Cow position:
Alignm length: 173
Alignm identity: 124
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 46, 76

Conread position: 348-532
Cow position:
Alignm length: 185
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 348-532
Cow position:
Alignm length: 188
Alignm identity: 139
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 46, 0

Conread position: 348-532
Cow position:
Alignm length: 188
Alignm identity: 141
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 45, 0

Conread position: 348-532
Cow position:
Alignm length: 186
Alignm identity: 140
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 46, 140

Conread position: 348-532
Cow position:
Alignm length: 189
Alignm identity: 142
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 122, 20

Conread position: 348-532
Cow position:
Alignm length: 186
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 137

Conread position: 348-532
Cow position:
Alignm length: 185
Alignm identity: 140
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 48, 0

Conread position: 348-532
Cow position:
Alignm length: 190
Alignm identity: 139
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 132, 38

Conread position: 348-532
Cow position:
Alignm length: 186
Alignm identity: 141
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 46, 142

Conread position: 348-532
Cow position:
Alignm length: 186
Alignm identity: 143
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 45, 115

Conread position: 348-532
Cow position:
Alignm length: 189
Alignm identity: 136
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 44, 167

Conread position: 348-532
Cow position:
Alignm length: 187
Alignm identity: 140
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 46, 125

Conread position: 348-532
Cow position:
Alignm length: 186
Alignm identity: 143
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 46, 150

Conread position: 348-532
Cow position:
Alignm length: 191
Alignm identity: 139
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 348-533
Cow position:
Alignm length: 190
Alignm identity: 144
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 46, 0

Conread position: 348-533
Cow position:
Alignm length: 187
Alignm identity: 149
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 46, 109

Conread position: 348-533
Cow position:
Alignm length: 186
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 348-535
Cow position:
Alignm length: 193
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 46, 129

Conread position: 348-537
Cow position:
Alignm length: 190
Alignm identity: 142
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 46, 0

Conread position: 348-551
Cow position:
Alignm length: 208
Alignm identity: 149
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 184, 42

Conread position: 348-551
Cow position:
Alignm length: 209
Alignm identity: 155
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 46, 138

Conread position: 348-551
Cow position:
Alignm length: 209
Alignm identity: 165
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 46, 128

Conread position: 348-551
Cow position:
Alignm length: 207
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 186, 31

Conread position: 348-551
Cow position:
Alignm length: 206
Alignm identity: 144
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 348-551
Cow position:
Alignm length: 207
Alignm identity: 156
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 46, 169

Conread position: 348-551
Cow position:
Alignm length: 215
Alignm identity: 160
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 46, 0

Conread position: 348-551
Cow position:
Alignm length: 206
Alignm identity: 155
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 46, 151

Conread position: 348-551
Cow position:
Alignm length: 205
Alignm identity: 155
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 46, 65

Conread position: 348-551
Cow position:
Alignm length: 213
Alignm identity: 151
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 348-551
Cow position:
Alignm length: 206
Alignm identity: 158
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 46, 150

Conread position: 348-551
Cow position:
Alignm length: 208
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 186, 46

Conread position: 348-551
Cow position:
Alignm length: 207
Alignm identity: 148
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 46, 135

Conread position: 348-551
Cow position:
Alignm length: 204
Alignm identity: 148
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 42, 0

Conread position: 349-473
Cow position:
Alignm length: 126
Alignm identity: 103
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 349-532
Cow position:
Alignm length: 185
Alignm identity: 140
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 42, 139

Conread position: 349-551
Cow position:
Alignm length: 211
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 32

Conread position: 352-483
Cow position:
Alignm length: 134
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 352-527
Cow position:
Alignm length: 184
Alignm identity: 132
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 10, 104

Conread position: 352-532
Cow position:
Alignm length: 183
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 41, 137

Conread position: 352-532
Cow position:
Alignm length: 182
Alignm identity: 139
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 42, 129

Conread position: 352-532
Cow position:
Alignm length: 181
Alignm identity: 141
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 135, 0

Conread position: 352-551
Cow position:
Alignm length: 208
Alignm identity: 146
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 49

Conread position: 352-551
Cow position:
Alignm length: 203
Alignm identity: 152
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 43, 152

Conread position: 352-551
Cow position:
Alignm length: 204
Alignm identity: 147
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 42, 144

Conread position: 354-482
Cow position:
Alignm length: 130
Alignm identity: 102
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 354-533
Cow position:
Alignm length: 181
Alignm identity: 134
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 40, 134

Conread position: 354-534
Cow position:
Alignm length: 182
Alignm identity: 141
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 40, 75

Conread position: 359-488
Cow position:
Alignm length: 130
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 359-522
Cow position:
Alignm length: 165
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 35, 20

Conread position: 359-532
Cow position:
Alignm length: 175
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 35, 70

Conread position: 359-532
Cow position:
Alignm length: 178
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 138

Conread position: 359-540
Cow position:
Alignm length: 184
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 126

Conread position: 359-549
Cow position:
Alignm length: 196
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 138

Conread position: 359-550
Cow position:
Alignm length: 195
Alignm identity: 138
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 359-551
Cow position:
Alignm length: 194
Alignm identity: 144
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 34, 180

Conread position: 360-530
Cow position:
Alignm length: 183
Alignm identity: 134
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 360-551
Cow position:
Alignm length: 197
Alignm identity: 139
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 34, 129

Conread position: 360-551
Cow position:
Alignm length: 197
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 22

Conread position: 360-551
Cow position:
Alignm length: 197
Alignm identity: 149
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 34, 142

Conread position: 361-532
Cow position:
Alignm length: 174
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 84

Conread position: 361-532
Cow position:
Alignm length: 173
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 52

Conread position: 361-551
Cow position:
Alignm length: 191
Alignm identity: 138
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 362-493
Cow position:
Alignm length: 133
Alignm identity: 108
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 29, 69

Conread position: 364-532
Cow position:
Alignm length: 170
Alignm identity: 132
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 26, 120

Conread position: 365-532
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 63

Conread position: 365-532
Cow position:
Alignm length: 169
Alignm identity: 129
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 28, 72

Conread position: 366-503
Cow position:
Alignm length: 143
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 30

Conread position: 366-551
Cow position:
Alignm length: 187
Alignm identity: 107
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 366-551
Cow position:
Alignm length: 191
Alignm identity: 144
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 29, 119

Conread position: 367-532
Cow position:
Alignm length: 166
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 368-495
Cow position:
Alignm length: 131
Alignm identity: 108
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 7, 61

Conread position: 368-532
Cow position:
Alignm length: 166
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 11

Conread position: 368-551
Cow position:
Alignm length: 189
Alignm identity: 135
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 25, 118

Conread position: 368-551
Cow position:
Alignm length: 188
Alignm identity: 142
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 26, 108

Conread position: 368-551
Cow position:
Alignm length: 195
Alignm identity: 140
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 26, 71

Conread position: 369-478
Cow position:
Alignm length: 111
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 369-532
Cow position:
Alignm length: 172
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 369-551
Cow position:
Alignm length: 188
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 119

Conread position: 370-478
Cow position:
Alignm length: 111
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 374-504
Cow position:
Alignm length: 132
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 374-509
Cow position:
Alignm length: 136
Alignm identity: 106
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 113, 0

Conread position: 374-532
Cow position:
Alignm length: 159
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 376-485
Cow position:
Alignm length: 110
Alignm identity: 88
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 378-551
Cow position:
Alignm length: 178
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 156, 18

Conread position: 382-532
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 12, 19

Conread position: 382-535
Cow position:
Alignm length: 155
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 120

Conread position: 382-551
Cow position:
Alignm length: 170
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 12, 0

Conread position: 383-501
Cow position:
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 383-532
Cow position:
Alignm length: 150
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 383-551
Cow position:
Alignm length: 171
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 117, 0

Conread position: 390-532
Cow position:
Alignm length: 143
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 390-533
Cow position:
Alignm length: 144
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 111, 0

Conread position: 390-551
Cow position:
Alignm length: 166
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 144, 97

Conread position: 390-551
Cow position:
Alignm length: 167
Alignm identity: 130
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 38

Conread position: 392-532
Cow position:
Alignm length: 141
Alignm identity: 106
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 393-532
Cow position:
Alignm length: 147
Alignm identity: 118
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 93, 0

Conread position: 402-532
Cow position:
Alignm length: 132
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 113, 91

Show alignments to all cow chromosomes.