Cow genome map

Conread name: rsug18_k19.y1

Conread position: 318-484
Cow position:
Alignm length: 168
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 31

Conread position: 341-532
Cow position:
Alignm length: 193
Alignm identity: 142
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 8, 39

Conread position: 345-482
Cow position:
Alignm length: 139
Alignm identity: 102
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 345-522
Cow position:
Alignm length: 180
Alignm identity: 129
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 48, 131

Conread position: 345-532
Cow position:
Alignm length: 188
Alignm identity: 140
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 144, 0

Conread position: 345-533
Cow position:
Alignm length: 191
Alignm identity: 144
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 48, 142

Conread position: 345-533
Cow position:
Alignm length: 190
Alignm identity: 144
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 50, 159

Conread position: 345-551
Cow position:
Alignm length: 208
Alignm identity: 147
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 38

Conread position: 346-495
Cow position:
Alignm length: 151
Alignm identity: 118
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 46, 23

Conread position: 346-531
Cow position:
Alignm length: 194
Alignm identity: 144
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 46, 0

Conread position: 346-551
Cow position:
Alignm length: 210
Alignm identity: 152
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 186, 134

Conread position: 348-478
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 348-481
Cow position:
Alignm length: 135
Alignm identity: 106
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 47, 128

Conread position: 348-481
Cow position:
Alignm length: 135
Alignm identity: 106
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 348-482
Cow position:
Alignm length: 136
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 53

Conread position: 348-483
Cow position:
Alignm length: 137
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 57, 46

Conread position: 348-483
Cow position:
Alignm length: 137
Alignm identity: 107
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 348-483
Cow position:
Alignm length: 137
Alignm identity: 102
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 348-483
Cow position:
Alignm length: 137
Alignm identity: 107
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 348-483
Cow position:
Alignm length: 137
Alignm identity: 107
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 348-483
Cow position:
Alignm length: 137
Alignm identity: 111
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 348-485
Cow position:
Alignm length: 139
Alignm identity: 102
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 348-489
Cow position:
Alignm length: 145
Alignm identity: 114
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 36, 0

Conread position: 348-493
Cow position:
Alignm length: 147
Alignm identity: 113
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 46, 31

Conread position: 348-493
Cow position:
Alignm length: 147
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 125

Conread position: 348-496
Cow position:
Alignm length: 151
Alignm identity: 117
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 45, 81

Conread position: 348-503
Cow position:
Alignm length: 157
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 348-504
Cow position:
Alignm length: 158
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 47, 133

Conread position: 348-504
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 348-509
Cow position:
Alignm length: 163
Alignm identity: 125
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 46, 100

Conread position: 348-517
Cow position:
Alignm length: 172
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 103

Conread position: 348-526
Cow position:
Alignm length: 179
Alignm identity: 134
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 348-528
Cow position:
Alignm length: 182
Alignm identity: 131
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 45, 150

Conread position: 348-528
Cow position:
Alignm length: 182
Alignm identity: 129
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 46, 31

Conread position: 348-530
Cow position:
Alignm length: 184
Alignm identity: 140
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 45, 157

Conread position: 348-531
Cow position:
Alignm length: 186
Alignm identity: 141
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 46, 134

Conread position: 348-532
Cow position:
Alignm length: 186
Alignm identity: 135
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 54

Conread position: 348-532
Cow position:
Alignm length: 186
Alignm identity: 138
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 47, 147

Conread position: 348-532
Cow position:
Alignm length: 188
Alignm identity: 136
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 47, 0

Conread position: 348-532
Cow position:
Alignm length: 186
Alignm identity: 136
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 46, 0

Conread position: 348-532
Cow position:
Alignm length: 186
Alignm identity: 135
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 46, 16

Conread position: 348-532
Cow position:
Alignm length: 185
Alignm identity: 135
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 348-532
Cow position:
Alignm length: 186
Alignm identity: 138
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 46, 140

Conread position: 348-532
Cow position:
Alignm length: 192
Alignm identity: 143
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 348-532
Cow position:
Alignm length: 186
Alignm identity: 137
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 47, 140

Conread position: 348-532
Cow position:
Alignm length: 188
Alignm identity: 136
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 46, 97

Conread position: 348-532
Cow position:
Alignm length: 186
Alignm identity: 136
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 46, 31

Conread position: 348-532
Cow position:
Alignm length: 186
Alignm identity: 143
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 43, 140

Conread position: 348-533
Cow position:
Alignm length: 187
Alignm identity: 138
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 47, 11

Conread position: 348-533
Cow position:
Alignm length: 187
Alignm identity: 134
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 41, 128

Conread position: 348-533
Cow position:
Alignm length: 192
Alignm identity: 139
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 0

Conread position: 348-536
Cow position:
Alignm length: 195
Alignm identity: 141
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 348-551
Cow position:
Alignm length: 209
Alignm identity: 156
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 45, 140

Conread position: 348-551
Cow position:
Alignm length: 206
Alignm identity: 152
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 46, 134

Conread position: 348-551
Cow position:
Alignm length: 209
Alignm identity: 156
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 46, 128

Conread position: 348-551
Cow position:
Alignm length: 210
Alignm identity: 151
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 133

Conread position: 348-551
Cow position:
Alignm length: 209
Alignm identity: 158
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 46, 128

Conread position: 349-478
Cow position:
Alignm length: 131
Alignm identity: 99
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 349-483
Cow position:
Alignm length: 136
Alignm identity: 103
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 349-503
Cow position:
Alignm length: 156
Alignm identity: 116
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 45, 120

Conread position: 349-532
Cow position:
Alignm length: 185
Alignm identity: 146
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 44, 99

Conread position: 349-550
Cow position:
Alignm length: 209
Alignm identity: 153
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 45, 78

Conread position: 349-550
Cow position:
Alignm length: 209
Alignm identity: 153
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 45, 78

Conread position: 350-518
Cow position:
Alignm length: 172
Alignm identity: 127
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 44, 19

Conread position: 350-533
Cow position:
Alignm length: 188
Alignm identity: 131
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 350-533
Cow position:
Alignm length: 185
Alignm identity: 131
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 42, 135

Conread position: 352-493
Cow position:
Alignm length: 143
Alignm identity: 106
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 124, 39

Conread position: 352-503
Cow position:
Alignm length: 160
Alignm identity: 117
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 352-514
Cow position:
Alignm length: 165
Alignm identity: 118
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 10, 130

Conread position: 352-532
Cow position:
Alignm length: 182
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 64

Conread position: 352-538
Cow position:
Alignm length: 194
Alignm identity: 141
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 124, 42

Conread position: 352-551
Cow position:
Alignm length: 205
Alignm identity: 153
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 40, 50

Conread position: 352-551
Cow position:
Alignm length: 206
Alignm identity: 146
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 42, 119

Conread position: 353-504
Cow position:
Alignm length: 153
Alignm identity: 110
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 354-532
Cow position:
Alignm length: 182
Alignm identity: 137
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 13, 0

Conread position: 354-532
Cow position:
Alignm length: 180
Alignm identity: 128
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 38, 131

Conread position: 354-532
Cow position:
Alignm length: 180
Alignm identity: 128
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 38, 131

Conread position: 354-532
Cow position:
Alignm length: 180
Alignm identity: 127
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 38, 134

Conread position: 359-478
Cow position:
Alignm length: 122
Alignm identity: 98
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 35, 86

Conread position: 359-485
Cow position:
Alignm length: 132
Alignm identity: 102
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 359-495
Cow position:
Alignm length: 138
Alignm identity: 106
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 35, 62

Conread position: 359-527
Cow position:
Alignm length: 175
Alignm identity: 129
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 35, 127

Conread position: 359-530
Cow position:
Alignm length: 172
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 359-532
Cow position:
Alignm length: 174
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 359-532
Cow position:
Alignm length: 175
Alignm identity: 129
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 34, 122

Conread position: 359-551
Cow position:
Alignm length: 195
Alignm identity: 139
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 33, 122

Conread position: 360-476
Cow position:
Alignm length: 118
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 50

Conread position: 360-532
Cow position:
Alignm length: 174
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 35, 126

Conread position: 360-532
Cow position:
Alignm length: 174
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 142

Conread position: 361-482
Cow position:
Alignm length: 122
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 361-487
Cow position:
Alignm length: 128
Alignm identity: 101
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 33, 115

Conread position: 361-493
Cow position:
Alignm length: 134
Alignm identity: 107
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 361-532
Cow position:
Alignm length: 172
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 123, 0

Conread position: 363-532
Cow position:
Alignm length: 172
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 28

Conread position: 363-551
Cow position:
Alignm length: 190
Alignm identity: 140
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 31, 68

Conread position: 364-475
Cow position:
Alignm length: 113
Alignm identity: 89
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 364-504
Cow position:
Alignm length: 142
Alignm identity: 112
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 368-503
Cow position:
Alignm length: 136
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 369-493
Cow position:
Alignm length: 126
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 107

Conread position: 369-532
Cow position:
Alignm length: 165
Alignm identity: 125
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 23, 121

Conread position: 369-532
Cow position:
Alignm length: 165
Alignm identity: 131
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 25, 87

Conread position: 369-551
Cow position:
Alignm length: 186
Alignm identity: 136
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 25, 60

Conread position: 370-483
Cow position:
Alignm length: 115
Alignm identity: 95
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 24, 31

Conread position: 370-532
Cow position:
Alignm length: 164
Alignm identity: 118
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 27, 115

Conread position: 374-550
Cow position:
Alignm length: 178
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 116

Conread position: 378-503
Cow position:
Alignm length: 128
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 16, 37

Conread position: 378-532
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 14, 103

Conread position: 378-551
Cow position:
Alignm length: 179
Alignm identity: 137
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 16, 107

Conread position: 379-532
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 379-533
Cow position:
Alignm length: 160
Alignm identity: 124
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 15, 21

Conread position: 379-551
Cow position:
Alignm length: 174
Alignm identity: 125
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 15, 105

Conread position: 382-532
Cow position:
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 12, 106

Conread position: 382-532
Cow position:
Alignm length: 152
Alignm identity: 113
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 16, 31

Conread position: 382-534
Cow position:
Alignm length: 156
Alignm identity: 114
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 15, 107

Conread position: 383-532
Cow position:
Alignm length: 155
Alignm identity: 116
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 49, 100

Conread position: 383-532
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 384-532
Cow position:
Alignm length: 149
Alignm identity: 113
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 6, 0

Conread position: 384-532
Cow position:
Alignm length: 149
Alignm identity: 117
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 6, 0

Conread position: 384-532
Cow position:
Alignm length: 150
Alignm identity: 111
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 7, 104

Conread position: 390-532
Cow position:
Alignm length: 143
Alignm identity: 112
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 99, 0

Conread position: 390-533
Cow position:
Alignm length: 144
Alignm identity: 114
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 95, 0

Conread position: 402-533
Cow position:
Alignm length: 132
Alignm identity: 104
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 83, 0

Conread position: 411-533
Cow position:
Alignm length: 123
Alignm identity: 95
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 416-532
Cow position:
Alignm length: 117
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 423-532
Cow position:
Alignm length: 110
Alignm identity: 91
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.