Cow genome map


           Conread name:
           rsug18_k19.y1
        

               Conread position:
               328-532
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               345-483
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               345-483
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               345-531
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               49, 19
               

               Conread position:
               345-532
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               49, 149
               

               Conread position:
               345-551
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               46, 83
               

               Conread position:
               346-487
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               48, 85
               

               Conread position:
               346-518
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               348-473
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               348-474
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               348-478
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               45, 105
               

               Conread position:
               348-478
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               43, 35
               

               Conread position:
               348-482
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               38, 115
               

               Conread position:
               348-483
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               46, 90
               

               Conread position:
               348-485
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               348-493
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               348-498
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               348-503
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               58, 49
               

               Conread position:
               348-504
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               348-514
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               46, 29
               

               Conread position:
               348-532
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               47, 70
               

               Conread position:
               348-532
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               30, 129
               

               Conread position:
               348-532
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               48, 65
               

               Conread position:
               348-532
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               348-532
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               43, 81
               

               Conread position:
               348-532
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               46, 81
               

               Conread position:
               348-532
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               47, 140
               

               Conread position:
               348-532
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               348-532
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               46, 37
               

               Conread position:
               348-532
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               46, 54
               

               Conread position:
               348-532
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               46, 140
               

               Conread position:
               348-532
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               348-533
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               46, 115
               

               Conread position:
               348-533
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               46, 154
               

               Conread position:
               348-533
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               348-549
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               46, 157
               

               Conread position:
               348-551
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               348-551
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               35, 142
               

               Conread position:
               348-551
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               348-551
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               348-551
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               46, 114
               

               Conread position:
               349-481
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               349-483
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               349-503
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               349-533
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               349-537
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               13, 140
               

               Conread position:
               349-551
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               43, 149
               

               Conread position:
               350-532
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               44, 56
               

               Conread position:
               352-482
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               352-483
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               352-489
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               352-533
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               10, 52
               

               Conread position:
               352-551
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               354-483
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               354-504
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               354-509
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               354-532
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               33, 110
               

               Conread position:
               354-532
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               40, 151
               

               Conread position:
               354-532
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               40, 25
               

               Conread position:
               357-503
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               359-522
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               359-530
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               34, 69
               

               Conread position:
               359-532
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               34, 72
               

               Conread position:
               359-532
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               35, 59
               

               Conread position:
               359-550
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               34, 8
               

               Conread position:
               360-532
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               35, 71
               

               Conread position:
               360-532
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               360-532
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               34, 116
               

               Conread position:
               360-551
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               34, 7
               

               Conread position:
               361-532
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               33, 120
               

               Conread position:
               361-545
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               30, 149
               

               Conread position:
               362-537
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               33, 85
               

               Conread position:
               365-479
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               365-549
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               28, 53
               

               Conread position:
               368-481
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               368-507
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               368-531
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               26, 120
               

               Conread position:
               369-551
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               25, 91
               

               Conread position:
               370-532
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               24, 13
               

               Conread position:
               374-499
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               374-532
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               20, 71
               

               Conread position:
               374-532
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               20, 100
               

               Conread position:
               379-503
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               56, 6
               

               Conread position:
               379-509
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               379-532
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               54, 11
               

               Conread position:
               379-532
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               19, 143
               

               Conread position:
               379-551
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               379-551
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               13, 109
               

               Conread position:
               384-532
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               10, 17
               

               Conread position:
               385-532
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               388-551
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               19, 8
               

               Conread position:
               390-483
               

               Cow position:
               
               

               Alignm length:
               94
               

               Alignm identity:
               80
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               390-526
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               17, 88
               

               Conread position:
               390-532
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               390-532
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               390-551
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               144, 114
               

               Conread position:
               413-551
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               121, 71
               
Show alignments to all cow chromosomes.