Cow genome map

Conread name: rsug18_k19.y1

Conread position: 325-493
Cow position: chr26:30026204-30026368 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 22, 11

Conread position: 343-532
Cow position: chr26:19145895-19146081 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 37, 42

Conread position: 345-518
Cow position: chr26:11538527-11538699 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 49, 149

Conread position: 347-503
Cow position: chr26:677985-677826 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 6, 105

Conread position: 348-478
Cow position: chr26:7224344-7224212 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 348-478
Cow position: chr26:11263639-11263768 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 127, 49

Conread position: 348-481
Cow position: chr26:25074715-25074849 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 348-483
Cow position: chr26:24453909-24453776 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 47, 53

Conread position: 348-483
Cow position: chr26:32571291-32571427 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 97

Conread position: 348-495
Cow position: chr26:6865022-6865171 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 348-500
Cow position: chr26:28374445-28374290 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 348-503
Cow position: chr26:7157608-7157451 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 348-531
Cow position: chr26:11672295-11672477 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 46, 136

Conread position: 348-532
Cow position: chr26:4167355-4167172 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 46, 97

Conread position: 348-532
Cow position: chr26:4807556-4807735 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 46, 0

Conread position: 348-532
Cow position: chr26:7148307-7148123 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 46, 121

Conread position: 348-532
Cow position: chr26:18381312-18381486 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 29

Conread position: 348-532
Cow position: chr26:23671414-23671596 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 46, 128

Conread position: 348-532
Cow position: chr26:25663547-25663371 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 348-532
Cow position: chr26:29664161-29663976 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 46, 140

Conread position: 348-532
Cow position: chr26:32830079-32830261 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 46, 87

Conread position: 348-532
Cow position: chr26:33253318-33253139 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 47, 137

Conread position: 348-533
Cow position: chr26:16435658-16435471 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 348-533
Cow position: chr26:24240678-24240863 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 46, 55

Conread position: 348-549
Cow position: chr26:6794143-6794345 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 151

Conread position: 348-551
Cow position: chr26:10764210-10764415 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 46, 122

Conread position: 349-532
Cow position: chr26:586880-586695 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 46, 75

Conread position: 349-532
Cow position: chr26:6714302-6714121 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 12, 30

Conread position: 349-532
Cow position: chr26:23112037-23112215 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 352-479
Cow position: chr26:19774298-19774169 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 10, 0

Conread position: 352-551
Cow position: chr26:4363302-4363500 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 41, 101

Conread position: 353-491
Cow position: chr26:22349009-22348870 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 69, 49

Conread position: 353-550
Cow position: chr26:17398579-17398775 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 41, 133

Conread position: 353-551
Cow position: chr26:9501712-9501910 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 33, 44

Conread position: 354-532
Cow position: chr26:31903171-31903347 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 127

Conread position: 354-532
Cow position: chr26:34027031-34026856 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 359-479
Cow position: chr26:34314700-34314821 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 359-483
Cow position: chr26:16796197-16796076 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 359-483
Cow position: chr26:34060342-34060467 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 359-495
Cow position: chr26:3071966-3071832 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 70

Conread position: 359-532
Cow position: chr26:2701975-2701807 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 359-532
Cow position: chr26:32563358-32563526 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 32, 72

Conread position: 359-535
Cow position: chr26:13021136-13020958 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 123
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 359-550
Cow position: chr26:5406988-5407179 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 36, 135

Conread position: 360-551
Cow position: chr26:16549994-16550188 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 29, 125

Conread position: 360-551
Cow position: chr26:32601360-32601556 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 137

Conread position: 363-487
Cow position: chr26:28446596-28446721 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 363-509
Cow position: chr26:829818-829963 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 28, 123

Conread position: 365-532
Cow position: chr26:34114277-34114442 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 32, 111

Conread position: 367-532
Cow position: chr26:35677870-35678026 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 123, 27

Conread position: 368-531
Cow position: chr26:32981456-32981294 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 117

Conread position: 368-551
Cow position: chr26:27768283-27768468 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 12, 120

Conread position: 370-533
Cow position: chr26:28202739-28202577 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 23, 131

Conread position: 383-551
Cow position: chr26:8811505-8811675 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 8, 33

Conread position: 385-551
Cow position: chr26:26245134-26244968 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 148, 63

Conread position: 386-550
Cow position: chr26:16801018-16801185 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 64, 7

Conread position: 390-532
Cow position: chr26:1041040-1041180 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 97, 0

Conread position: 390-551
Cow position: chr26:21279920-21279761 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 142, 54

Conread position: 392-551
Cow position: chr26:27482523-27482362 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 142, 95

Conread position: 394-531
Cow position: chr26:11968091-11967957 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 394-532
Cow position: chr26:32013953-32014095 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 92, 133

Conread position: 395-532
Cow position: chr26:16166649-16166514 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 32

Show alignments to all cow chromosomes.