Cow genome map


           Conread name:
           rsug18_k19.y1
        

               Conread position:
               323-550
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               31, 17
               

               Conread position:
               341-532
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               54, 140
               

               Conread position:
               342-477
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               342-503
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               5, 33
               

               Conread position:
               342-532
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               52, 153
               

               Conread position:
               342-551
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               52, 16
               

               Conread position:
               345-472
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               345-478
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               345-532
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               36, 152
               

               Conread position:
               345-532
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               36, 141
               

               Conread position:
               345-532
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               346-531
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               346-531
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               47, 127
               

               Conread position:
               347-532
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               48, 139
               

               Conread position:
               347-532
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               31, 85
               

               Conread position:
               348-477
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               122, 46
               

               Conread position:
               348-478
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               348-478
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               348-479
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               348-483
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               348-483
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               348-483
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               31, 36
               

               Conread position:
               348-483
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               348-484
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               348-487
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               348-499
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               348-499
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               85, 79
               

               Conread position:
               348-501
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               348-503
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               348-525
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               48, 143
               

               Conread position:
               348-530
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               348-532
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               47, 134
               

               Conread position:
               348-532
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               46, 81
               

               Conread position:
               348-532
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               47, 143
               

               Conread position:
               348-532
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               348-532
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               46, 119
               

               Conread position:
               348-532
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               348-532
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               348-532
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               97, 46
               

               Conread position:
               348-532
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               348-532
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               46, 83
               

               Conread position:
               348-532
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               46, 148
               

               Conread position:
               348-532
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               32, 139
               

               Conread position:
               348-550
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               35, 143
               

               Conread position:
               348-551
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               46, 34
               

               Conread position:
               348-551
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               162
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               348-551
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               67, 46
               

               Conread position:
               348-551
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               186, 46
               

               Conread position:
               348-551
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               67, 31
               

               Conread position:
               348-551
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               47, 156
               

               Conread position:
               348-551
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               187, 156
               

               Conread position:
               348-551
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               58, 48
               

               Conread position:
               348-551
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               47, 31
               

               Conread position:
               349-531
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               349-532
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               44, 142
               

               Conread position:
               349-532
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               349-532
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               13, 62
               

               Conread position:
               349-551
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               139, 19
               

               Conread position:
               350-483
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               352-532
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               43, 136
               

               Conread position:
               352-551
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               42, 50
               

               Conread position:
               353-532
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               40, 30
               

               Conread position:
               353-532
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               40, 14
               

               Conread position:
               354-493
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               354-532
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               40, 127
               

               Conread position:
               357-482
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               37, 116
               

               Conread position:
               359-483
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               359-532
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               359-532
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               43, 29
               

               Conread position:
               359-532
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               32, 122
               

               Conread position:
               359-532
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               359-550
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               175, 28
               

               Conread position:
               359-551
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               35, 122
               

               Conread position:
               359-551
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               176, 128
               

               Conread position:
               361-532
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               362-483
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               363-551
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               366-532
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               26, 124
               

               Conread position:
               366-532
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               28, 122
               

               Conread position:
               366-551
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               128, 28
               

               Conread position:
               368-483
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               368-485
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               93
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               368-532
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               370-532
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               24, 118
               

               Conread position:
               370-532
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               24, 61
               

               Conread position:
               370-532
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               25, 61
               

               Conread position:
               371-532
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               23, 117
               

               Conread position:
               374-551
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               158, 20
               

               Conread position:
               376-471
               

               Cow position:
               
               

               Alignm length:
               97
               

               Alignm identity:
               83
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               379-532
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               15, 106
               

               Conread position:
               382-533
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               12, 108
               

               Conread position:
               383-495
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               94
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               384-532
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               10, 86
               

               Conread position:
               385-532
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               388-503
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               388-532
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               9, 48
               

               Conread position:
               390-551
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               144, 90
               

               Conread position:
               394-533
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               402-532
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               405-532
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               409-551
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               126, 76
               
Show alignments to all cow chromosomes.