Cow genome map


           Conread name:
           rsug18_k19.y1
        

               Conread position:
               321-532
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               73, 7
               

               Conread position:
               326-532
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               341-534
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               68, 53
               

               Conread position:
               342-503
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               342-532
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               50, 161
               

               Conread position:
               344-483
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               344-532
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               51, 132
               

               Conread position:
               345-476
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               345-479
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               49, 71
               

               Conread position:
               345-518
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               345-531
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               137, 23
               

               Conread position:
               345-532
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               49, 141
               

               Conread position:
               345-533
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               50, 139
               

               Conread position:
               345-551
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               50, 130
               

               Conread position:
               346-551
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               49, 144
               

               Conread position:
               348-478
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               46, 80
               

               Conread position:
               348-478
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               348-478
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               348-483
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               348-483
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               348-483
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               348-484
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               43, 53
               

               Conread position:
               348-484
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               46, 61
               

               Conread position:
               348-484
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               348-493
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               348-493
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               46, 20
               

               Conread position:
               348-495
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               39, 142
               

               Conread position:
               348-496
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               348-519
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               46, 76
               

               Conread position:
               348-532
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               47, 81
               

               Conread position:
               348-532
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               33, 135
               

               Conread position:
               348-532
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               46, 128
               

               Conread position:
               348-532
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               348-532
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               69, 32
               

               Conread position:
               348-532
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               47, 133
               

               Conread position:
               348-532
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               46, 26
               

               Conread position:
               348-532
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               348-532
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               65, 16
               

               Conread position:
               348-533
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               46, 64
               

               Conread position:
               348-533
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               348-534
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               45, 137
               

               Conread position:
               348-550
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               44, 17
               

               Conread position:
               348-551
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               46, 83
               

               Conread position:
               348-551
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               185, 133
               

               Conread position:
               348-551
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               46, 91
               

               Conread position:
               349-485
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               349-532
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               44, 51
               

               Conread position:
               349-551
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               45, 136
               

               Conread position:
               349-551
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               45, 175
               

               Conread position:
               352-483
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               10, 23
               

               Conread position:
               352-532
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               9, 54
               

               Conread position:
               352-532
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               42, 133
               

               Conread position:
               352-551
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               42, 136
               

               Conread position:
               352-551
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               8, 43
               

               Conread position:
               353-532
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               42, 136
               

               Conread position:
               354-478
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               40, 71
               

               Conread position:
               354-530
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               40, 25
               

               Conread position:
               355-499
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               39, 126
               

               Conread position:
               356-504
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               359-492
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               359-493
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               359-528
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               34, 127
               

               Conread position:
               359-532
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               35, 89
               

               Conread position:
               359-532
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               93, 31
               

               Conread position:
               359-532
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               36, 137
               

               Conread position:
               359-551
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               33, 126
               

               Conread position:
               359-551
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               37, 133
               

               Conread position:
               360-478
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               360-493
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               360-514
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               34, 152
               

               Conread position:
               360-532
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               360-551
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               34, 124
               

               Conread position:
               361-532
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               30, 140
               

               Conread position:
               361-532
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               33, 129
               

               Conread position:
               361-533
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               33, 18
               

               Conread position:
               366-551
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               367-473
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               368-481
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               368-483
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               368-532
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               26, 121
               

               Conread position:
               368-532
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               26, 120
               

               Conread position:
               368-533
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               26, 128
               

               Conread position:
               370-483
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               91
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               370-551
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               25, 10
               

               Conread position:
               371-532
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               23, 117
               

               Conread position:
               372-551
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               374-535
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               21, 106
               

               Conread position:
               379-551
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               15, 65
               

               Conread position:
               380-532
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               14, 96
               

               Conread position:
               382-532
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               382-551
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               152, 8
               

               Conread position:
               383-532
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               383-551
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               9, 141
               

               Conread position:
               384-503
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               15, 65
               

               Conread position:
               384-551
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               10, 121
               

               Conread position:
               384-551
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               90, 6
               

               Conread position:
               388-499
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               389-533
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               6, 92
               

               Conread position:
               389-551
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               145, 20
               

               Conread position:
               390-551
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               142, 93
               

               Conread position:
               397-532
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               402-532
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               402-551
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               132, 83
               

               Conread position:
               406-551
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               8, 78
               
Show alignments to all cow chromosomes.