Cow genome map

Conread name: rsug18_k19.y1

Conread position: 321-532
Cow position: chr28:118570-118780 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 73, 7

Conread position: 326-532
Cow position: chr28:26826190-26826388 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 31, 0

Conread position: 341-534
Cow position: chr28:6283509-6283321 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 68, 53

Conread position: 342-503
Cow position: chr28:20313257-20313419 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 116
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 342-532
Cow position: chr28:6563918-6563728 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 50, 161

Conread position: 344-483
Cow position: chr28:32179679-32179815 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 344-532
Cow position: chr28:8259610-8259798 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 51, 132

Conread position: 345-476
Cow position: chr28:5867710-5867836 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 345-479
Cow position: chr28:21008682-21008548 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 71

Conread position: 345-518
Cow position: chr28:15601260-15601431 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 345-531
Cow position: chr28:1632669-1632480 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 137, 23

Conread position: 345-532
Cow position: chr28:26982755-26982570 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 49, 141

Conread position: 345-533
Cow position: chr28:4937259-4937072 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 146
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 50, 139

Conread position: 345-551
Cow position: chr28:8347714-8347923 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 50, 130

Conread position: 346-551
Cow position: chr28:11815094-11814890 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 49, 144

Conread position: 348-478
Cow position: chr28:2752508-2752377 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 46, 80

Conread position: 348-478
Cow position: chr28:4765660-4765793 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 348-478
Cow position: chr28:7388781-7388655 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 348-483
Cow position: chr28:4881254-4881118 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 348-483
Cow position: chr28:8149646-8149510 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 348-483
Cow position: chr28:23410339-23410201 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 348-484
Cow position: chr28:3143889-3143755 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 43, 53

Conread position: 348-484
Cow position: chr28:5166754-5166890 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 61

Conread position: 348-484
Cow position: chr28:17601568-17601431 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 348-493
Cow position: chr28:2819761-2819907 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 348-493
Cow position: chr28:4185893-4186038 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 46, 20

Conread position: 348-495
Cow position: chr28:10053343-10053192 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 39, 142

Conread position: 348-496
Cow position: chr28:11559646-11559497 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 46, 0

Conread position: 348-519
Cow position: chr28:5224693-5224856 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 46, 76

Conread position: 348-532
Cow position: chr28:2898975-2899164 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 47, 81

Conread position: 348-532
Cow position: chr28:3726225-3726043 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 33, 135

Conread position: 348-532
Cow position: chr28:4138685-4138501 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 46, 128

Conread position: 348-532
Cow position: chr28:12951409-12951582 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 348-532
Cow position: chr28:13356381-13356200 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 69, 32

Conread position: 348-532
Cow position: chr28:20397384-20397202 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 47, 133

Conread position: 348-532
Cow position: chr28:23460134-23460310 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 46, 26

Conread position: 348-532
Cow position: chr28:26743612-26743797 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 348-532
Cow position: chr28:30293602-30293419 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 65, 16

Conread position: 348-533
Cow position: chr28:3011283-3011100 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 46, 64

Conread position: 348-533
Cow position: chr28:5144535-5144347 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 348-534
Cow position: chr28:17680608-17680793 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 45, 137

Conread position: 348-550
Cow position: chr28:2523930-2524130 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 44, 17

Conread position: 348-551
Cow position: chr28:751213-751417 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 46, 83

Conread position: 348-551
Cow position: chr28:4282504-4282300 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 185, 133

Conread position: 348-551
Cow position: chr28:5630084-5630288 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 158
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 46, 91

Conread position: 349-485
Cow position: chr28:21355218-21355355 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 42, 0

Conread position: 349-532
Cow position: chr28:34843585-34843406 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 44, 51

Conread position: 349-551
Cow position: chr28:10615959-10615761 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 156
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 45, 136

Conread position: 349-551
Cow position: chr28:11866678-11866479 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 45, 175

Conread position: 352-483
Cow position: chr28:13090536-13090404 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 23

Conread position: 352-532
Cow position: chr28:10845095-10845268 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 54

Conread position: 352-532
Cow position: chr28:19039029-19038852 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 126
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 42, 133

Conread position: 352-551
Cow position: chr28:4643780-4643581 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 42, 136

Conread position: 352-551
Cow position: chr28:10495308-10495111 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 8, 43

Conread position: 353-532
Cow position: chr28:4307906-4307727 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 42, 136

Conread position: 354-478
Cow position: chr28:3078689-3078565 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 71

Conread position: 354-530
Cow position: chr28:13048291-13048117 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 40, 25

Conread position: 355-499
Cow position: chr28:19222158-19222014 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 39, 126

Conread position: 356-504
Cow position: chr28:7498154-7498004 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 359-492
Cow position: chr28:5230128-5229999 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 359-493
Cow position: chr28:5817837-5817975 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 359-528
Cow position: chr28:28765906-28765738 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 34, 127

Conread position: 359-532
Cow position: chr28:6321814-6321985 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 35, 89

Conread position: 359-532
Cow position: chr28:13527193-13527365 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 93, 31

Conread position: 359-532
Cow position: chr28:19262590-19262418 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 36, 137

Conread position: 359-551
Cow position: chr28:7350651-7350839 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 126

Conread position: 359-551
Cow position: chr28:12933737-12933547 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 37, 133

Conread position: 360-478
Cow position: chr28:11411538-11411417 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 360-493
Cow position: chr28:23047618-23047750 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 360-514
Cow position: chr28:17414477-17414321 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 152

Conread position: 360-532
Cow position: chr28:4163581-4163414 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 360-551
Cow position: chr28:34230226-34230420 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 34, 124

Conread position: 361-532
Cow position: chr28:12973880-12974050 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 30, 140

Conread position: 361-532
Cow position: chr28:18608369-18608199 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 33, 129

Conread position: 361-533
Cow position: chr28:4355547-4355718 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 33, 18

Conread position: 366-551
Cow position: chr28:4073973-4074166 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 29, 0

Conread position: 367-473
Cow position: chr28:16388911-16389018 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 368-481
Cow position: chr28:2743087-2743201 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 368-483
Cow position: chr28:16691929-16692045 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 368-532
Cow position: chr28:117757-117592 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 26, 121

Conread position: 368-532
Cow position: chr28:4022679-4022842 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 26, 120

Conread position: 368-533
Cow position: chr28:2821259-2821428 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 26, 128

Conread position: 370-483
Cow position: chr28:9418958-9418844 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 370-551
Cow position: chr28:8716379-8716191 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 25, 10

Conread position: 371-532
Cow position: chr28:32014793-32014951 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 23, 117

Conread position: 372-551
Cow position: chr28:659285-659098 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 374-535
Cow position: chr28:13448135-13448293 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 21, 106

Conread position: 379-551
Cow position: chr28:7644757-7644933 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 15, 65

Conread position: 380-532
Cow position: chr28:31223543-31223391 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 14, 96

Conread position: 382-532
Cow position: chr28:11827710-11827854 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 382-551
Cow position: chr28:26820257-26820087 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 152, 8

Conread position: 383-532
Cow position: chr28:22085519-22085379 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 383-551
Cow position: chr28:10958823-10958988 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 9, 141

Conread position: 384-503
Cow position: chr28:12631559-12631678 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 15, 65

Conread position: 384-551
Cow position: chr28:2892274-2892445 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 10, 121

Conread position: 384-551
Cow position: chr28:4870781-4870607 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 90, 6

Conread position: 388-499
Cow position: chr28:26269413-26269524 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 389-533
Cow position: chr28:8167327-8167187 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 6, 92

Conread position: 389-551
Cow position: chr28:34830183-34830343 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 145, 20

Conread position: 390-551
Cow position: chr28:3729990-3729831 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 142, 93

Conread position: 397-532
Cow position: chr28:6301117-6301250 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 98, 0

Conread position: 402-532
Cow position: chr28:8656125-8656000 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 402-551
Cow position: chr28:16200702-16200551 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 132, 83

Conread position: 406-551
Cow position: chr28:30922016-30921868 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 78

Show alignments to all cow chromosomes.