Cow genome map

Conread name: rsug18_k19.y1

Conread position: 341-504
Cow position: chr29:13867238-13867075 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 53, 145

Conread position: 343-532
Cow position: chr29:501173-501360 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 51, 36

Conread position: 345-471
Cow position: chr29:17154755-17154881 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 58

Conread position: 345-482
Cow position: chr29:11053883-11053745 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 49, 58

Conread position: 345-484
Cow position: chr29:21196675-21196533 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 345-499
Cow position: chr29:7103534-7103689 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 345-503
Cow position: chr29:11647071-11647229 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 49, 20

Conread position: 345-532
Cow position: chr29:31928965-31929146 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 49, 85

Conread position: 345-551
Cow position: chr29:34744644-34744448 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 189, 33

Conread position: 345-551
Cow position: chr29:34745681-34745478 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 158
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 50, 29

Conread position: 346-534
Cow position: chr29:35084245-35084060 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 48, 130

Conread position: 347-494
Cow position: chr29:28979520-28979377 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 347-532
Cow position: chr29:38754961-38754778 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 47, 135

Conread position: 348-476
Cow position: chr29:31981810-31981939 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 348-478
Cow position: chr29:44684082-44684208 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 24

Conread position: 348-481
Cow position: chr29:31934358-31934492 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 348-483
Cow position: chr29:16365910-16365770 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 348-485
Cow position: chr29:17409314-17409452 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 348-485
Cow position: chr29:40096945-40097079 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 27, 48

Conread position: 348-493
Cow position: chr29:2056040-2056186 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 46, 0

Conread position: 348-499
Cow position: chr29:1220152-1220000 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 348-499
Cow position: chr29:2263013-2262864 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 46, 53

Conread position: 348-504
Cow position: chr29:40299041-40298884 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 348-523
Cow position: chr29:18404137-18403961 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 65

Conread position: 348-530
Cow position: chr29:32799726-32799545 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 128, 26

Conread position: 348-532
Cow position: chr29:4120833-4121016 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 45, 143

Conread position: 348-532
Cow position: chr29:5520506-5520324 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 46, 147

Conread position: 348-532
Cow position: chr29:8163848-8163667 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 45, 19

Conread position: 348-532
Cow position: chr29:8669345-8669515 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 348-532
Cow position: chr29:21645297-21645477 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 149, 52

Conread position: 348-532
Cow position: chr29:29057158-29057336 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 348-532
Cow position: chr29:30227296-30227120 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 348-532
Cow position: chr29:30440913-30441099 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 150
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 58, 105

Conread position: 348-532
Cow position: chr29:38581952-38582130 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 29, 39

Conread position: 348-533
Cow position: chr29:17222392-17222577 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 46, 138

Conread position: 348-533
Cow position: chr29:36632882-36632699 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 27, 129

Conread position: 348-545
Cow position: chr29:12025488-12025302 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 186, 46

Conread position: 348-545
Cow position: chr29:27926755-27926951 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 141, 45

Conread position: 348-550
Cow position: chr29:20167403-20167605 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 46, 127

Conread position: 348-551
Cow position: chr29:13639388-13639186 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 43, 165

Conread position: 348-551
Cow position: chr29:24188086-24187880 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 47, 136

Conread position: 348-551
Cow position: chr29:26017525-26017317 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 25, 140

Conread position: 348-551
Cow position: chr29:33321330-33321532 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 186, 45

Conread position: 348-551
Cow position: chr29:36357108-36357311 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 46, 54

Conread position: 348-551
Cow position: chr29:37618284-37618491 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 46, 141

Conread position: 349-476
Cow position: chr29:7966225-7966354 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 350-551
Cow position: chr29:5892826-5893029 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 352-478
Cow position: chr29:4423456-4423329 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 352-532
Cow position: chr29:1933589-1933410 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 9, 149

Conread position: 352-532
Cow position: chr29:35677561-35677381 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 10, 137

Conread position: 352-551
Cow position: chr29:23874443-23874645 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 42, 132

Conread position: 353-489
Cow position: chr29:34517499-34517370 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 354-478
Cow position: chr29:32894247-32894373 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 354-504
Cow position: chr29:13372649-13372799 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 126
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 40, 106

Conread position: 354-527
Cow position: chr29:36220518-36220697 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 354-532
Cow position: chr29:15947151-15947329 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 11, 135

Conread position: 354-532
Cow position: chr29:25474908-25475093 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 39, 0

Conread position: 357-532
Cow position: chr29:18450148-18449978 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 139
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 36, 22

Conread position: 359-477
Cow position: chr29:34297578-34297459 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 359-482
Cow position: chr29:21509842-21509965 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 359-483
Cow position: chr29:34359830-34359706 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 35, 20

Conread position: 359-533
Cow position: chr29:19363701-19363869 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 50

Conread position: 359-551
Cow position: chr29:5046643-5046836 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 36, 138

Conread position: 359-551
Cow position: chr29:21443348-21443158 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 35, 129

Conread position: 360-483
Cow position: chr29:32926095-32926219 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 360-493
Cow position: chr29:12309999-12310133 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 360-503
Cow position: chr29:25333468-25333326 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 121
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 34, 48

Conread position: 360-551
Cow position: chr29:35258976-35259164 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 149
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 34, 123

Conread position: 363-532
Cow position: chr29:23142340-23142172 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 21, 123

Conread position: 363-551
Cow position: chr29:31489313-31489507 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 32, 125

Conread position: 365-478
Cow position: chr29:16195838-16195950 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 365-532
Cow position: chr29:24051385-24051218 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 29, 64

Conread position: 368-522
Cow position: chr29:14576858-14577007 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 108

Conread position: 368-549
Cow position: chr29:629537-629718 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 26, 160

Conread position: 368-551
Cow position: chr29:3711378-3711559 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 68

Conread position: 368-551
Cow position: chr29:18878482-18878299 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 23, 137

Conread position: 369-483
Cow position: chr29:19060082-19059968 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 81

Conread position: 369-551
Cow position: chr29:19420613-19420437 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 25, 125

Conread position: 370-533
Cow position: chr29:19187027-19187187 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 24, 115

Conread position: 370-551
Cow position: chr29:4441204-4441022 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 24, 76

Conread position: 375-532
Cow position: chr29:26539241-26539391 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 126
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 19, 101

Conread position: 376-550
Cow position: chr29:4648202-4648030 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 18, 100

Conread position: 379-551
Cow position: chr29:27911603-27911775 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 153, 14

Conread position: 384-551
Cow position: chr29:22577164-22576995 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 10, 97

Conread position: 386-532
Cow position: chr29:934940-935086 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 117, 10

Conread position: 387-551
Cow position: chr29:27042292-27042454 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 117
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 392-503
Cow position: chr29:22818798-22818911 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 392-551
Cow position: chr29:42404971-42405132 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 138, 95

Conread position: 402-551
Cow position: chr29:38732187-38732338 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 133, 81

Conread position: 404-532
Cow position: chr29:28279251-28279125 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 405-551
Cow position: chr29:22019150-22019004 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 129, 70

Show alignments to all cow chromosomes.