Cow genome map

Conread name: rsug18_k19.y1

Conread position: 341-504
Cow position:
Alignm length: 164
Alignm identity: 123
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 53, 0

Conread position: 342-545
Cow position:
Alignm length: 209
Alignm identity: 148
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 51, 10

Conread position: 343-475
Cow position:
Alignm length: 135
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 343-551
Cow position:
Alignm length: 211
Alignm identity: 155
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 52, 59

Conread position: 344-532
Cow position:
Alignm length: 189
Alignm identity: 138
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 344-532
Cow position:
Alignm length: 190
Alignm identity: 134
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 49, 0

Conread position: 345-483
Cow position:
Alignm length: 140
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 345-531
Cow position:
Alignm length: 191
Alignm identity: 145
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 48, 100

Conread position: 345-532
Cow position:
Alignm length: 195
Alignm identity: 142
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 50, 162

Conread position: 345-533
Cow position:
Alignm length: 192
Alignm identity: 138
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 47, 147

Conread position: 345-550
Cow position:
Alignm length: 217
Alignm identity: 157
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 130, 30

Conread position: 345-551
Cow position:
Alignm length: 214
Alignm identity: 153
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 21, 51

Conread position: 347-508
Cow position:
Alignm length: 166
Alignm identity: 130
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 129, 43

Conread position: 347-531
Cow position:
Alignm length: 198
Alignm identity: 141
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 347-532
Cow position:
Alignm length: 189
Alignm identity: 130
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 347-533
Cow position:
Alignm length: 188
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 95

Conread position: 348-478
Cow position:
Alignm length: 132
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 348-481
Cow position:
Alignm length: 134
Alignm identity: 104
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 348-481
Cow position:
Alignm length: 134
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 348-483
Cow position:
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 348-483
Cow position:
Alignm length: 141
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 48, 39

Conread position: 348-483
Cow position:
Alignm length: 136
Alignm identity: 109
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 348-483
Cow position:
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 97

Conread position: 348-483
Cow position:
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 348-483
Cow position:
Alignm length: 137
Alignm identity: 108
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 348-485
Cow position:
Alignm length: 141
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 348-491
Cow position:
Alignm length: 146
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 348-493
Cow position:
Alignm length: 151
Alignm identity: 116
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 43, 31

Conread position: 348-494
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 43, 131

Conread position: 348-495
Cow position:
Alignm length: 149
Alignm identity: 114
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 45, 83

Conread position: 348-497
Cow position:
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 348-501
Cow position:
Alignm length: 155
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 348-501
Cow position:
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 348-502
Cow position:
Alignm length: 157
Alignm identity: 123
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 46, 83

Conread position: 348-504
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 46, 114

Conread position: 348-504
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 348-530
Cow position:
Alignm length: 183
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 348-531
Cow position:
Alignm length: 185
Alignm identity: 142
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 44, 142

Conread position: 348-531
Cow position:
Alignm length: 186
Alignm identity: 141
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 39, 137

Conread position: 348-531
Cow position:
Alignm length: 186
Alignm identity: 141
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 47, 141

Conread position: 348-532
Cow position:
Alignm length: 187
Alignm identity: 139
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 46, 80

Conread position: 348-532
Cow position:
Alignm length: 185
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 348-532
Cow position:
Alignm length: 192
Alignm identity: 137
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 47, 137

Conread position: 348-532
Cow position:
Alignm length: 186
Alignm identity: 135
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 46, 0

Conread position: 348-532
Cow position:
Alignm length: 187
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 138

Conread position: 348-532
Cow position:
Alignm length: 186
Alignm identity: 136
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 46, 147

Conread position: 348-532
Cow position:
Alignm length: 191
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 36, 60

Conread position: 348-532
Cow position:
Alignm length: 186
Alignm identity: 145
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 45, 140

Conread position: 348-532
Cow position:
Alignm length: 188
Alignm identity: 137
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 348-532
Cow position:
Alignm length: 186
Alignm identity: 136
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 46, 154

Conread position: 348-532
Cow position:
Alignm length: 185
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 348-550
Cow position:
Alignm length: 204
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 137

Conread position: 348-550
Cow position:
Alignm length: 205
Alignm identity: 154
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 46, 61

Conread position: 348-551
Cow position:
Alignm length: 209
Alignm identity: 149
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 46, 133

Conread position: 348-551
Cow position:
Alignm length: 205
Alignm identity: 145
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 44, 90

Conread position: 348-551
Cow position:
Alignm length: 209
Alignm identity: 148
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 72

Conread position: 348-551
Cow position:
Alignm length: 209
Alignm identity: 149
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 72

Conread position: 348-551
Cow position:
Alignm length: 209
Alignm identity: 148
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 46, 16

Conread position: 348-551
Cow position:
Alignm length: 209
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 133

Conread position: 348-551
Cow position:
Alignm length: 209
Alignm identity: 147
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 142, 40

Conread position: 348-551
Cow position:
Alignm length: 209
Alignm identity: 153
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 46, 144

Conread position: 348-551
Cow position:
Alignm length: 205
Alignm identity: 157
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 46, 152

Conread position: 348-551
Cow position:
Alignm length: 209
Alignm identity: 148
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 144

Conread position: 348-551
Cow position:
Alignm length: 214
Alignm identity: 151
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 149

Conread position: 348-551
Cow position:
Alignm length: 209
Alignm identity: 156
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 46, 137

Conread position: 348-551
Cow position:
Alignm length: 209
Alignm identity: 156
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 46, 83

Conread position: 349-483
Cow position:
Alignm length: 138
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 349-517
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 46, 139

Conread position: 349-551
Cow position:
Alignm length: 211
Alignm identity: 157
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 12, 141

Conread position: 350-532
Cow position:
Alignm length: 187
Alignm identity: 143
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 44, 25

Conread position: 350-551
Cow position:
Alignm length: 204
Alignm identity: 146
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 10, 45

Conread position: 352-471
Cow position:
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 352-479
Cow position:
Alignm length: 129
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 352-483
Cow position:
Alignm length: 134
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 352-503
Cow position:
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 77

Conread position: 352-528
Cow position:
Alignm length: 177
Alignm identity: 131
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 42, 0

Conread position: 352-531
Cow position:
Alignm length: 180
Alignm identity: 127
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 352-532
Cow position:
Alignm length: 181
Alignm identity: 139
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 42, 0

Conread position: 352-532
Cow position:
Alignm length: 183
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 139

Conread position: 354-483
Cow position:
Alignm length: 130
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 354-532
Cow position:
Alignm length: 180
Alignm identity: 131
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 43, 49

Conread position: 354-532
Cow position:
Alignm length: 183
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 135, 39

Conread position: 354-532
Cow position:
Alignm length: 181
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 170, 40

Conread position: 359-519
Cow position:
Alignm length: 162
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 135

Conread position: 359-532
Cow position:
Alignm length: 175
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 35, 70

Conread position: 359-532
Cow position:
Alignm length: 177
Alignm identity: 133
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 35, 147

Conread position: 359-532
Cow position:
Alignm length: 175
Alignm identity: 132
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 35, 129

Conread position: 359-532
Cow position:
Alignm length: 175
Alignm identity: 126
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 35, 122

Conread position: 359-532
Cow position:
Alignm length: 175
Alignm identity: 135
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 35, 145

Conread position: 359-551
Cow position:
Alignm length: 203
Alignm identity: 146
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 159

Conread position: 359-551
Cow position:
Alignm length: 197
Alignm identity: 148
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 36, 129

Conread position: 359-551
Cow position:
Alignm length: 198
Alignm identity: 148
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 33, 127

Conread position: 360-493
Cow position:
Alignm length: 134
Alignm identity: 104
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 360-497
Cow position:
Alignm length: 138
Alignm identity: 106
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 360-532
Cow position:
Alignm length: 180
Alignm identity: 137
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 34, 109

Conread position: 360-532
Cow position:
Alignm length: 178
Alignm identity: 138
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 35, 134

Conread position: 360-551
Cow position:
Alignm length: 195
Alignm identity: 145
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 34, 123

Conread position: 361-483
Cow position:
Alignm length: 125
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 361-532
Cow position:
Alignm length: 177
Alignm identity: 129
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 30, 145

Conread position: 361-551
Cow position:
Alignm length: 192
Alignm identity: 143
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 19, 23

Conread position: 362-503
Cow position:
Alignm length: 142
Alignm identity: 112
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 363-531
Cow position:
Alignm length: 172
Alignm identity: 130
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 32, 0

Conread position: 365-508
Cow position:
Alignm length: 145
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 365-551
Cow position:
Alignm length: 192
Alignm identity: 139
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 29, 123

Conread position: 367-551
Cow position:
Alignm length: 190
Alignm identity: 134
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 27, 114

Conread position: 367-551
Cow position:
Alignm length: 189
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 138, 26

Conread position: 368-532
Cow position:
Alignm length: 166
Alignm identity: 121
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 26, 55

Conread position: 368-536
Cow position:
Alignm length: 170
Alignm identity: 127
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 26, 122

Conread position: 368-536
Cow position:
Alignm length: 170
Alignm identity: 127
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 26, 122

Conread position: 370-483
Cow position:
Alignm length: 115
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 374-493
Cow position:
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 55

Conread position: 374-498
Cow position:
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 374-527
Cow position:
Alignm length: 157
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 20, 74

Conread position: 374-551
Cow position:
Alignm length: 183
Alignm identity: 139
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 147, 16

Conread position: 375-551
Cow position:
Alignm length: 186
Alignm identity: 140
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 20, 0

Conread position: 376-532
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 18, 103

Conread position: 376-551
Cow position:
Alignm length: 184
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 379-533
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 13, 106

Conread position: 379-535
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 379-541
Cow position:
Alignm length: 171
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 15, 152

Conread position: 380-551
Cow position:
Alignm length: 177
Alignm identity: 133
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 18, 96

Conread position: 382-532
Cow position:
Alignm length: 153
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 16, 101

Conread position: 382-532
Cow position:
Alignm length: 152
Alignm identity: 117
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 13, 27

Conread position: 382-532
Cow position:
Alignm length: 153
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 11, 88

Conread position: 382-532
Cow position:
Alignm length: 153
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 382-550
Cow position:
Alignm length: 174
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 116

Conread position: 383-492
Cow position:
Alignm length: 110
Alignm identity: 89
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 383-532
Cow position:
Alignm length: 158
Alignm identity: 129
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 11, 0

Conread position: 383-532
Cow position:
Alignm length: 151
Alignm identity: 121
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 12, 122

Conread position: 383-551
Cow position:
Alignm length: 173
Alignm identity: 129
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 151, 7

Conread position: 387-551
Cow position:
Alignm length: 169
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 145, 95

Conread position: 389-551
Cow position:
Alignm length: 165
Alignm identity: 124
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 100, 91

Conread position: 390-532
Cow position:
Alignm length: 151
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 390-537
Cow position:
Alignm length: 148
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 97, 0

Conread position: 393-532
Cow position:
Alignm length: 140
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 394-551
Cow position:
Alignm length: 160
Alignm identity: 118
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 140, 0

Conread position: 402-532
Cow position:
Alignm length: 131
Alignm identity: 101
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 402-538
Cow position:
Alignm length: 138
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 132, 85

Conread position: 405-532
Cow position:
Alignm length: 129
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 7, 76

Conread position: 411-532
Cow position:
Alignm length: 122
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 0

Show alignments to all cow chromosomes.