Cow genome map

Conread name: rsug18_k19.y1

Conread position: 156-551
Cow position:
Alignm length: 398
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 378, 366

Conread position: 330-532
Cow position:
Alignm length: 213
Alignm identity: 148
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 24, 7

Conread position: 337-478
Cow position:
Alignm length: 144
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 339-532
Cow position:
Alignm length: 198
Alignm identity: 144
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 16, 82

Conread position: 342-550
Cow position:
Alignm length: 212
Alignm identity: 154
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 53, 122

Conread position: 345-483
Cow position:
Alignm length: 140
Alignm identity: 104
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 345-493
Cow position:
Alignm length: 150
Alignm identity: 116
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 345-510
Cow position:
Alignm length: 169
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 152

Conread position: 345-532
Cow position:
Alignm length: 189
Alignm identity: 135
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 49, 143

Conread position: 345-532
Cow position:
Alignm length: 189
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 131, 163

Conread position: 345-551
Cow position:
Alignm length: 220
Alignm identity: 160
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 37, 103

Conread position: 347-549
Cow position:
Alignm length: 205
Alignm identity: 148
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 47, 132

Conread position: 348-478
Cow position:
Alignm length: 132
Alignm identity: 101
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 348-478
Cow position:
Alignm length: 132
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 348-482
Cow position:
Alignm length: 138
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 348-483
Cow position:
Alignm length: 137
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 58

Conread position: 348-483
Cow position:
Alignm length: 137
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 348-483
Cow position:
Alignm length: 138
Alignm identity: 106
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 44, 95

Conread position: 348-487
Cow position:
Alignm length: 142
Alignm identity: 112
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 47, 0

Conread position: 348-493
Cow position:
Alignm length: 150
Alignm identity: 113
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 348-495
Cow position:
Alignm length: 148
Alignm identity: 113
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 348-497
Cow position:
Alignm length: 151
Alignm identity: 120
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 46, 0

Conread position: 348-504
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 348-504
Cow position:
Alignm length: 159
Alignm identity: 123
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 46, 0

Conread position: 348-514
Cow position:
Alignm length: 169
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 348-517
Cow position:
Alignm length: 171
Alignm identity: 129
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 47, 150

Conread position: 348-530
Cow position:
Alignm length: 190
Alignm identity: 141
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 47, 97

Conread position: 348-530
Cow position:
Alignm length: 185
Alignm identity: 137
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 47, 129

Conread position: 348-531
Cow position:
Alignm length: 184
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 348-532
Cow position:
Alignm length: 186
Alignm identity: 139
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 47, 140

Conread position: 348-532
Cow position:
Alignm length: 188
Alignm identity: 133
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 33, 140

Conread position: 348-532
Cow position:
Alignm length: 187
Alignm identity: 138
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 47, 141

Conread position: 348-532
Cow position:
Alignm length: 186
Alignm identity: 139
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 47, 121

Conread position: 348-532
Cow position:
Alignm length: 188
Alignm identity: 143
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 57, 124

Conread position: 348-532
Cow position:
Alignm length: 185
Alignm identity: 137
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 46, 0

Conread position: 348-532
Cow position:
Alignm length: 187
Alignm identity: 139
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 41, 141

Conread position: 348-532
Cow position:
Alignm length: 185
Alignm identity: 141
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 30, 0

Conread position: 348-550
Cow position:
Alignm length: 203
Alignm identity: 152
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 34, 0

Conread position: 348-551
Cow position:
Alignm length: 209
Alignm identity: 153
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 17, 143

Conread position: 348-551
Cow position:
Alignm length: 210
Alignm identity: 154
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 46, 63

Conread position: 348-551
Cow position:
Alignm length: 209
Alignm identity: 153
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 46, 0

Conread position: 348-551
Cow position:
Alignm length: 209
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 72, 46

Conread position: 348-551
Cow position:
Alignm length: 211
Alignm identity: 151
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 44, 139

Conread position: 348-551
Cow position:
Alignm length: 208
Alignm identity: 156
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 186, 122

Conread position: 348-551
Cow position:
Alignm length: 204
Alignm identity: 147
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 348-551
Cow position:
Alignm length: 207
Alignm identity: 156
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 33, 140

Conread position: 348-551
Cow position:
Alignm length: 205
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 81

Conread position: 348-551
Cow position:
Alignm length: 209
Alignm identity: 153
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 46, 140

Conread position: 349-482
Cow position:
Alignm length: 135
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 349-482
Cow position:
Alignm length: 136
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 349-483
Cow position:
Alignm length: 136
Alignm identity: 103
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 349-532
Cow position:
Alignm length: 187
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 134

Conread position: 349-540
Cow position:
Alignm length: 200
Alignm identity: 139
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 146

Conread position: 350-493
Cow position:
Alignm length: 145
Alignm identity: 112
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 44, 0

Conread position: 350-503
Cow position:
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 17

Conread position: 352-493
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 39

Conread position: 352-532
Cow position:
Alignm length: 181
Alignm identity: 136
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 42, 0

Conread position: 352-532
Cow position:
Alignm length: 184
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 12, 138

Conread position: 352-551
Cow position:
Alignm length: 203
Alignm identity: 155
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 42, 111

Conread position: 353-532
Cow position:
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 30, 0

Conread position: 353-550
Cow position:
Alignm length: 203
Alignm identity: 148
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 40, 133

Conread position: 353-551
Cow position:
Alignm length: 204
Alignm identity: 153
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 39, 145

Conread position: 354-483
Cow position:
Alignm length: 135
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 354-493
Cow position:
Alignm length: 141
Alignm identity: 111
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 40, 77

Conread position: 354-493
Cow position:
Alignm length: 140
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 354-528
Cow position:
Alignm length: 177
Alignm identity: 136
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 7, 137

Conread position: 354-532
Cow position:
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 41, 134

Conread position: 354-533
Cow position:
Alignm length: 180
Alignm identity: 133
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 354-550
Cow position:
Alignm length: 200
Alignm identity: 142
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 39, 135

Conread position: 355-493
Cow position:
Alignm length: 140
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 356-485
Cow position:
Alignm length: 131
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 359-493
Cow position:
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 359-532
Cow position:
Alignm length: 175
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 359-532
Cow position:
Alignm length: 175
Alignm identity: 128
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 35, 42

Conread position: 359-532
Cow position:
Alignm length: 176
Alignm identity: 133
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 34, 0

Conread position: 359-532
Cow position:
Alignm length: 175
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 36, 129

Conread position: 359-533
Cow position:
Alignm length: 181
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 29, 127

Conread position: 360-530
Cow position:
Alignm length: 172
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 34, 116

Conread position: 360-532
Cow position:
Alignm length: 174
Alignm identity: 131
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 29, 128

Conread position: 360-533
Cow position:
Alignm length: 175
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 34, 126

Conread position: 360-551
Cow position:
Alignm length: 194
Alignm identity: 141
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 35, 126

Conread position: 361-530
Cow position:
Alignm length: 170
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 361-532
Cow position:
Alignm length: 173
Alignm identity: 124
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 33, 127

Conread position: 363-532
Cow position:
Alignm length: 170
Alignm identity: 131
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 20, 0

Conread position: 364-501
Cow position:
Alignm length: 138
Alignm identity: 104
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 364-532
Cow position:
Alignm length: 172
Alignm identity: 130
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 30, 45

Conread position: 365-532
Cow position:
Alignm length: 177
Alignm identity: 137
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 367-532
Cow position:
Alignm length: 167
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 138

Conread position: 367-551
Cow position:
Alignm length: 187
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 64

Conread position: 368-519
Cow position:
Alignm length: 153
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 142

Conread position: 368-532
Cow position:
Alignm length: 166
Alignm identity: 126
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 26, 134

Conread position: 369-549
Cow position:
Alignm length: 186
Alignm identity: 133
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 370-526
Cow position:
Alignm length: 158
Alignm identity: 122
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 24, 116

Conread position: 370-532
Cow position:
Alignm length: 164
Alignm identity: 121
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 370-532
Cow position:
Alignm length: 164
Alignm identity: 128
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 25, 106

Conread position: 370-551
Cow position:
Alignm length: 187
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 59

Conread position: 374-499
Cow position:
Alignm length: 128
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 9

Conread position: 374-532
Cow position:
Alignm length: 159
Alignm identity: 123
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 8, 0

Conread position: 374-551
Cow position:
Alignm length: 183
Alignm identity: 132
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 20, 130

Conread position: 374-551
Cow position:
Alignm length: 182
Alignm identity: 135
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 156, 16

Conread position: 379-502
Cow position:
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 379-532
Cow position:
Alignm length: 154
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 379-551
Cow position:
Alignm length: 178
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 15, 109

Conread position: 382-551
Cow position:
Alignm length: 175
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 12, 104

Conread position: 383-531
Cow position:
Alignm length: 150
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 105

Conread position: 383-532
Cow position:
Alignm length: 151
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 383-550
Cow position:
Alignm length: 172
Alignm identity: 130
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 10, 100

Conread position: 384-532
Cow position:
Alignm length: 151
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 10, 55

Conread position: 384-532
Cow position:
Alignm length: 152
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 111, 6

Conread position: 384-532
Cow position:
Alignm length: 150
Alignm identity: 117
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 10, 120

Conread position: 384-532
Cow position:
Alignm length: 150
Alignm identity: 118
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 10, 92

Conread position: 384-532
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 10, 18

Conread position: 384-532
Cow position:
Alignm length: 150
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 8, 37

Conread position: 385-532
Cow position:
Alignm length: 148
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 5, 0

Conread position: 387-551
Cow position:
Alignm length: 165
Alignm identity: 119
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 116, 0

Conread position: 388-551
Cow position:
Alignm length: 169
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 96

Conread position: 390-508
Cow position:
Alignm length: 120
Alignm identity: 95
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 112, 0

Conread position: 390-551
Cow position:
Alignm length: 166
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 144, 101

Conread position: 396-531
Cow position:
Alignm length: 137
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 94

Conread position: 401-532
Cow position:
Alignm length: 135
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 405-551
Cow position:
Alignm length: 151
Alignm identity: 120
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 129, 70

Conread position: 408-531
Cow position:
Alignm length: 127
Alignm identity: 102
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 95, 0

Show alignments to all cow chromosomes.