Cow genome map
| Conread name: | rsug18_k19.y1 |
| Conread position: | 341-504 |
| Cow position: | chrX:37129270-37129434 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 342-478 |
| Cow position: | chrX:6260145-6260010 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 91, 51 |
| Conread position: | 342-509 |
| Cow position: | chrX:45670225-45670392 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 50, 9 |
| Conread position: | 342-532 |
| Cow position: | chrX:31489522-31489711 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 51, 144 |
| Conread position: | 342-551 |
| Cow position: | chrX:35285175-35285387 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 53, 159 |
| Conread position: | 344-532 |
| Cow position: | chrX:25815897-25815709 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 51, 115 |
| Conread position: | 345-532 |
| Cow position: | chrX:4632853-4632664 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 49, 142 |
| Conread position: | 345-532 |
| Cow position: | chrX:12290724-12290908 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 49, 143 |
| Conread position: | 345-532 |
| Cow position: | chrX:18964818-18964635 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 134, 48 |
| Conread position: | 345-532 |
| Cow position: | chrX:38301814-38302004 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 51, 84 |
| Conread position: | 345-532 |
| Cow position: | chrX:48558751-48558936 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 50, 139 |
| Conread position: | 345-537 |
| Cow position: | chrX:27175008-27175194 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 345-551 |
| Cow position: | chrX:7351305-7351514 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 66, 49 |
| Conread position: | 345-551 |
| Cow position: | chrX:19018826-19018615 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 345-551 |
| Cow position: | chrX:27705592-27705800 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 50, 16 |
| Conread position: | 345-551 |
| Cow position: | chrX:42247177-42246968 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 164 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 49, 141 |
| Conread position: | 346-532 |
| Cow position: | chrX:16324008-16323825 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 346-532 |
| Cow position: | chrX:27228130-27228319 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 7, 149 |
| Conread position: | 346-551 |
| Cow position: | chrX:42836187-42836394 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 48, 137 |
| Conread position: | 347-551 |
| Cow position: | chrX:24331782-24331990 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 13, 156 |
| Conread position: | 348-478 |
| Cow position: | chrX:15147185-15147058 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 348-479 |
| Cow position: | chrX:11762993-11762861 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 348-481 |
| Cow position: | chrX:17966349-17966483 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 348-481 |
| Cow position: | chrX:43730215-43730081 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 46, 31 |
| Conread position: | 348-482 |
| Cow position: | chrX:31442821-31442686 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 348-482 |
| Cow position: | chrX:42855466-42855601 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 348-483 |
| Cow position: | chrX:22915032-22914898 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 83 |
| Conread position: | 348-483 |
| Cow position: | chrX:31829453-31829317 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 348-484 |
| Cow position: | chrX:38964116-38964253 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 348-484 |
| Cow position: | chrX:46433499-46433636 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 348-495 |
| Cow position: | chrX:32318313-32318462 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 46, 81 |
| Conread position: | 348-503 |
| Cow position: | chrX:5872325-5872481 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 348-503 |
| Cow position: | chrX:21665233-21665076 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 348-503 |
| Cow position: | chrX:27771957-27771804 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 88, 69 |
| Conread position: | 348-503 |
| Cow position: | chrX:42893932-42894091 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 348-504 |
| Cow position: | chrX:20743612-20743768 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 46, 135 |
| Conread position: | 348-504 |
| Cow position: | chrX:29680253-29680097 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 46, 135 |
| Conread position: | 348-507 |
| Cow position: | chrX:23188772-23188616 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 348-508 |
| Cow position: | chrX:33204961-33204802 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 46, 128 |
| Conread position: | 348-509 |
| Cow position: | chrX:25036995-25037159 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 348-517 |
| Cow position: | chrX:36514885-36514713 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 348-532 |
| Cow position: | chrX:1122535-1122356 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 348-532 |
| Cow position: | chrX:7648402-7648223 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 107 |
| Conread position: | 348-532 |
| Cow position: | chrX:21593295-21593482 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 95, 46 |
| Conread position: | 348-532 |
| Cow position: | chrX:23335964-23335785 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 348-532 |
| Cow position: | chrX:29478732-29478912 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 47, 67 |
| Conread position: | 348-532 |
| Cow position: | chrX:29601820-29601639 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 46, 137 |
| Conread position: | 348-532 |
| Cow position: | chrX:30672388-30672194 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 348-532 |
| Cow position: | chrX:31252425-31252598 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 348-532 |
| Cow position: | chrX:31294564-31294379 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 46, 133 |
| Conread position: | 348-532 |
| Cow position: | chrX:39220087-39220276 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 348-532 |
| Cow position: | chrX:41027167-41027350 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 47, 140 |
| Conread position: | 348-532 |
| Cow position: | chrX:42450006-42449823 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 150 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 46, 140 |
| Conread position: | 348-532 |
| Cow position: | chrX:43150435-43150621 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 37, 85 |
| Conread position: | 348-532 |
| Cow position: | chrX:44192439-44192252 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 44, 155 |
| Conread position: | 348-532 |
| Cow position: | chrX:45968156-45968336 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 47, 131 |
| Conread position: | 348-533 |
| Cow position: | chrX:32821037-32821231 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 348-539 |
| Cow position: | chrX:39180225-39180036 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 46, 95 |
| Conread position: | 348-550 |
| Cow position: | chrX:12309378-12309173 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 46, 156 |
| Conread position: | 348-550 |
| Cow position: | chrX:15820603-15820818 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 46, 67 |
| Conread position: | 348-550 |
| Cow position: | chrX:24170721-24170513 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 43, 88 |
| Conread position: | 348-550 |
| Cow position: | chrX:27394018-27393806 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 348-551 |
| Cow position: | chrX:1175974-1175777 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 46, 75 |
| Conread position: | 348-551 |
| Cow position: | chrX:6407554-6407757 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 47, 31 |
| Conread position: | 348-551 |
| Cow position: | chrX:10516261-10516467 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 46, 83 |
| Conread position: | 348-551 |
| Cow position: | chrX:11633690-11633895 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 46, 133 |
| Conread position: | 348-551 |
| Cow position: | chrX:17524376-17524170 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 45, 147 |
| Conread position: | 348-551 |
| Cow position: | chrX:17956701-17956902 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 186, 42 |
| Conread position: | 348-551 |
| Cow position: | chrX:18204459-18204253 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 46, 184 |
| Conread position: | 348-551 |
| Cow position: | chrX:20339883-20339682 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 46, 16 |
| Conread position: | 348-551 |
| Cow position: | chrX:26205440-26205244 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 46, 133 |
| Conread position: | 348-551 |
| Cow position: | chrX:27261199-27261403 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 46, 141 |
| Conread position: | 348-551 |
| Cow position: | chrX:27446694-27446896 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 45, 138 |
| Conread position: | 348-551 |
| Cow position: | chrX:33654836-33654630 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 46, 140 |
| Conread position: | 348-551 |
| Cow position: | chrX:37955855-37956058 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 46, 142 |
| Conread position: | 348-551 |
| Cow position: | chrX:38218722-38218926 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 42, 139 |
| Conread position: | 348-551 |
| Cow position: | chrX:38549453-38549659 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 44, 142 |
| Conread position: | 348-551 |
| Cow position: | chrX:38967896-38968108 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 24, 71 |
| Conread position: | 348-551 |
| Cow position: | chrX:41878922-41878724 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 178, 46 |
| Conread position: | 349-518 |
| Cow position: | chrX:16575120-16575289 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 13, 140 |
| Conread position: | 349-532 |
| Cow position: | chrX:169536-169351 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 349-532 |
| Cow position: | chrX:4645904-4645724 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 45, 127 |
| Conread position: | 349-532 |
| Cow position: | chrX:28878165-28877976 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 349-532 |
| Cow position: | chrX:34502929-34503118 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 349-551 |
| Cow position: | chrX:13121946-13122157 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 11, 145 |
| Conread position: | 350-551 |
| Cow position: | chrX:35392285-35392092 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 10, 45 |
| Conread position: | 350-551 |
| Cow position: | chrX:35985830-35986028 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 352-483 |
| Cow position: | chrX:11653776-11653914 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 352-532 |
| Cow position: | chrX:11859526-11859346 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 8, 75 |
| Conread position: | 352-532 |
| Cow position: | chrX:32910116-32910287 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 42, 79 |
| Conread position: | 352-549 |
| Cow position: | chrX:20887627-20887438 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 42, 27 |
| Conread position: | 352-551 |
| Cow position: | chrX:19356481-19356677 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 44, 65 |
| Conread position: | 352-551 |
| Cow position: | chrX:26979778-26979578 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 9, 75 |
| Conread position: | 352-551 |
| Cow position: | chrX:38094504-38094313 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 183, 42 |
| Conread position: | 353-497 |
| Cow position: | chrX:753165-753314 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 354-478 |
| Cow position: | chrX:38227093-38226971 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 52, 40 |
| Conread position: | 354-536 |
| Cow position: | chrX:32330181-32330365 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 81, 139 |
| Conread position: | 354-551 |
| Cow position: | chrX:11656095-11656291 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 40, 136 |
| Conread position: | 354-551 |
| Cow position: | chrX:44054816-44055016 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 40, 122 |
| Conread position: | 356-533 |
| Cow position: | chrX:28940258-28940435 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 36, 131 |
| Conread position: | 357-492 |
| Cow position: | chrX:38728751-38728887 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 357-504 |
| Cow position: | chrX:33639992-33640140 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 357-532 |
| Cow position: | chrX:8642063-8642235 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 37, 75 |
| Conread position: | 359-499 |
| Cow position: | chrX:6278479-6278338 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 359-503 |
| Cow position: | chrX:34508563-34508708 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 359-531 |
| Cow position: | chrX:19761773-19761938 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 35, 129 |
| Conread position: | 359-531 |
| Cow position: | chrX:20345472-20345640 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 359-532 |
| Cow position: | chrX:25035363-25035191 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 35, 122 |
| Conread position: | 359-532 |
| Cow position: | chrX:47344315-47344489 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 359-551 |
| Cow position: | chrX:28836913-28837097 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 175, 35 |
| Conread position: | 359-551 |
| Cow position: | chrX:32877356-32877166 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 35, 69 |
| Conread position: | 359-551 |
| Cow position: | chrX:36866192-36866386 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 36, 90 |
| Conread position: | 359-551 |
| Cow position: | chrX:46587841-46588033 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 35, 139 |
| Conread position: | 360-532 |
| Cow position: | chrX:32420234-32420401 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 20, 24 |
| Conread position: | 360-551 |
| Cow position: | chrX:40336931-40337124 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 34, 42 |
| Conread position: | 362-504 |
| Cow position: | chrX:31373558-31373701 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 362-530 |
| Cow position: | chrX:47868231-47868400 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 33, 7 |
| Conread position: | 363-503 |
| Cow position: | chrX:6850232-6850373 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 13, 114 |
| Conread position: | 363-532 |
| Cow position: | chrX:29451525-29451355 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 93, 20 |
| Conread position: | 363-551 |
| Cow position: | chrX:151928-152118 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 120, 31 |
| Conread position: | 363-551 |
| Cow position: | chrX:13923887-13924074 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 30, 125 |
| Conread position: | 364-532 |
| Cow position: | chrX:4109208-4109375 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 30, 120 |
| Conread position: | 364-532 |
| Cow position: | chrX:41790405-41790237 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 27, 117 |
| Conread position: | 364-532 |
| Cow position: | chrX:47046485-47046323 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 364-551 |
| Cow position: | chrX:16763903-16763717 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 28, 114 |
| Conread position: | 366-531 |
| Cow position: | chrX:44040207-44040366 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 367-485 |
| Cow position: | chrX:11582250-11582367 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 92 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 367-521 |
| Cow position: | chrX:23185517-23185370 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 27, 9 |
| Conread position: | 367-551 |
| Cow position: | chrX:44995525-44995713 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 28, 136 |
| Conread position: | 368-551 |
| Cow position: | chrX:46909843-46910021 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 27, 118 |
| Conread position: | 369-532 |
| Cow position: | chrX:2314590-2314428 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 25, 119 |
| Conread position: | 369-551 |
| Cow position: | chrX:27270404-27270582 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 24, 116 |
| Conread position: | 370-477 |
| Cow position: | chrX:2551121-2551230 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 370-532 |
| Cow position: | chrX:4091954-4092115 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 24, 136 |
| Conread position: | 370-551 |
| Cow position: | chrX:37749953-37749779 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 22, 40 |
| Conread position: | 374-551 |
| Cow position: | chrX:1960391-1960212 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 20, 126 |
| Conread position: | 374-551 |
| Cow position: | chrX:17498356-17498536 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 21, 112 |
| Conread position: | 374-551 |
| Cow position: | chrX:48822308-48822129 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 20, 107 |
| Conread position: | 375-496 |
| Cow position: | chrX:27667460-27667582 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 94 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 376-551 |
| Cow position: | chrX:876806-876634 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 18, 41 |
| Conread position: | 379-532 |
| Cow position: | chrX:31986535-31986382 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 15, 99 |
| Conread position: | 381-483 |
| Cow position: | chrX:45934332-45934434 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 21 |
| Conread position: | 381-532 |
| Cow position: | chrX:46068718-46068573 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 10, 103 |
| Conread position: | 382-532 |
| Cow position: | chrX:35681609-35681757 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 12, 99 |
| Conread position: | 383-532 |
| Cow position: | chrX:5097756-5097603 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 12, 111 |
| Conread position: | 383-532 |
| Cow position: | chrX:34270606-34270751 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 384-551 |
| Cow position: | chrX:33466671-33466835 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 130, 13 |
| Conread position: | 385-507 |
| Cow position: | chrX:44123302-44123423 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 385-532 |
| Cow position: | chrX:597427-597288 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 389-532 |
| Cow position: | chrX:42760302-42760443 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 390-501 |
| Cow position: | chrX:24547450-24547339 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 390-551 |
| Cow position: | chrX:10237862-10237700 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 144, 83 |
| Conread position: | 390-551 |
| Cow position: | chrX:37867304-37867467 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 144, 97 |
| Conread position: | 394-532 |
| Cow position: | chrX:28106902-28107036 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 401-550 |
| Cow position: | chrX:16801201-16801055 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 133, 29 |
| Conread position: | 402-532 |
| Cow position: | chrX:22552916-22552788 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 402-532 |
| Cow position: | chrX:26882017-26881889 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 403-532 |
| Cow position: | chrX:37717788-37717912 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 403-551 |
| Cow position: | chrX:9451409-9451554 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 131, 44 |
| Conread position: | 415-532 |
| Cow position: | chrX:15139422-15139306 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 60, 47 |
Show alignments to all cow chromosomes.