Cow genome map
| Conread name: | rsug23_g4.y1 |
| Conread position: | 4-237 |
| Cow position: | chr12:25177583-25177795 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 5, 34 |
| Conread position: | 5-258 |
| Cow position: | chr12:3510574-3510334 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 16, 82 |
| Conread position: | 5-261 |
| Cow position: | chr12:39465591-39465346 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 197 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 80, 122 |
| Conread position: | 6-282 |
| Cow position: | chr12:35378214-35377944 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 199 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 15, 113 |
| Conread position: | 8-145 |
| Cow position: | chr12:17269812-17269672 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 8-180 |
| Cow position: | chr12:46120822-46120986 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 13, 77 |
| Conread position: | 8-184 |
| Cow position: | chr12:22285112-22285279 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 13, 75 |
| Conread position: | 8-202 |
| Cow position: | chr12:15122336-15122142 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 13, 67 |
| Conread position: | 8-225 |
| Cow position: | chr12:45965251-45965452 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 92, 9 |
| Conread position: | 8-228 |
| Cow position: | chr12:17879291-17879505 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 13, 136 |
| Conread position: | 8-232 |
| Cow position: | chr12:34673330-34673547 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 11, 93 |
| Conread position: | 8-244 |
| Cow position: | chr12:33851367-33851140 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 11, 25 |
| Conread position: | 8-254 |
| Cow position: | chr12:18963918-18964154 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 11, 73 |
| Conread position: | 8-259 |
| Cow position: | chr12:45820356-45820593 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 11, 141 |
| Conread position: | 8-260 |
| Cow position: | chr12:5714640-5714397 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 13, 74 |
| Conread position: | 8-260 |
| Cow position: | chr12:5906066-5905826 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 13, 141 |
| Conread position: | 8-260 |
| Cow position: | chr12:32169550-32169305 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 195 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 13, 31 |
| Conread position: | 8-260 |
| Cow position: | chr12:35669460-35669697 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 12, 140 |
| Conread position: | 8-288 |
| Cow position: | chr12:17881871-17881591 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 206 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 14, 78 |
| Conread position: | 8-369 |
| Cow position: | chr12:6410725-6411071 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 245 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 13, 90 |
| Conread position: | 8-394 |
| Cow position: | chr12:18020867-18020500 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 262 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 74, 105 |
| Conread position: | 8-395 |
| Cow position: | chr12:18577849-18577493 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 272 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 13, 118 |
| Conread position: | 8-432 |
| Cow position: | chr12:28010899-28011289 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 289 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 8-433 |
| Cow position: | chr12:15429586-15429991 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 91 |
| Conread position: | 8-453 |
| Cow position: | chr12:6241329-6240896 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 120 |
| Conread position: | 8-461 |
| Cow position: | chr12:15531068-15530627 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 302 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 11, 75 |
| Conread position: | 8-461 |
| Cow position: | chr12:18123679-18123269 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 75 |
| Conread position: | 8-464 |
| Cow position: | chr12:6720338-6719902 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 144 |
| Conread position: | 8-464 |
| Cow position: | chr12:30170679-30170240 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 25 |
| Conread position: | 9-249 |
| Cow position: | chr12:43705568-43705799 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 172, 138 |
| Conread position: | 11-139 |
| Cow position: | chr12:9766870-9767001 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 11-234 |
| Cow position: | chr12:36544634-36544858 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 184 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 10, 145 |
| Conread position: | 11-258 |
| Cow position: | chr12:30210490-30210249 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 10, 102 |
| Conread position: | 11-261 |
| Cow position: | chr12:12178930-12178689 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 10, 70 |
| Conread position: | 11-261 |
| Cow position: | chr12:24577245-24577486 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 73, 88 |
| Conread position: | 11-262 |
| Cow position: | chr12:43942480-43942247 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 75, 131 |
| Conread position: | 11-426 |
| Cow position: | chr12:17001265-17000878 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 76 |
| Conread position: | 12-261 |
| Cow position: | chr12:20776917-20777163 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 74, 7 |
| Conread position: | 13-464 |
| Cow position: | chr12:28582500-28582932 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 301 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 201, 69 |
| Conread position: | 16-205 |
| Cow position: | chr12:19507638-19507451 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 72, 136 |
| Conread position: | 16-288 |
| Cow position: | chr12:20071571-20071849 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 59, 133 |
| Conread position: | 17-260 |
| Cow position: | chr12:941639-941401 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 70, 9 |
| Conread position: | 18-261 |
| Cow position: | chr12:18388290-18388514 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 15, 65 |
| Conread position: | 19-185 |
| Cow position: | chr12:37169948-37170104 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 19-207 |
| Cow position: | chr12:23855837-23855652 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 80, 129 |
| Conread position: | 19-225 |
| Cow position: | chr12:11836232-11836033 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 63, 123 |
| Conread position: | 19-235 |
| Cow position: | chr12:18518671-18518456 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 62, 125 |
| Conread position: | 19-257 |
| Cow position: | chr12:27037452-27037677 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 186 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 80, 67 |
| Conread position: | 19-257 |
| Cow position: | chr12:28748940-28748706 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 81, 129 |
| Conread position: | 19-258 |
| Cow position: | chr12:3906471-3906239 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 82, 13 |
| Conread position: | 19-258 |
| Cow position: | chr12:26222992-26223213 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 67, 18 |
| Conread position: | 19-260 |
| Cow position: | chr12:8710819-8710600 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 19-260 |
| Cow position: | chr12:8943226-8943452 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 163, 58 |
| Conread position: | 19-260 |
| Cow position: | chr12:11056873-11056645 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 63, 70 |
| Conread position: | 19-260 |
| Cow position: | chr12:30745714-30745482 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 58, 16 |
| Conread position: | 19-260 |
| Cow position: | chr12:34148363-34148582 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 19-260 |
| Cow position: | chr12:37993734-37993957 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 19-261 |
| Cow position: | chr12:5635455-5635680 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 19-261 |
| Cow position: | chr12:5940339-5940111 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 55 |
| Conread position: | 19-261 |
| Cow position: | chr12:15240740-15240956 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 104, 57 |
| Conread position: | 19-261 |
| Cow position: | chr12:18765975-18766213 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 55, 133 |
| Conread position: | 19-261 |
| Cow position: | chr12:33323498-33323731 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 19-261 |
| Cow position: | chr12:38454907-38454686 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 19-262 |
| Cow position: | chr12:730938-731168 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 54, 47 |
| Conread position: | 19-262 |
| Cow position: | chr12:6164024-6164262 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 186 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 64, 124 |
| Conread position: | 19-262 |
| Cow position: | chr12:35771023-35771265 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 133, 66 |
| Conread position: | 19-264 |
| Cow position: | chr12:24663112-24662880 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 19-264 |
| Cow position: | chr12:27563379-27563622 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 150, 89 |
| Conread position: | 19-308 |
| Cow position: | chr12:31429573-31429862 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 73, 24 |
| Conread position: | 19-387 |
| Cow position: | chr12:2813225-2812882 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 252 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 65, 104 |
| Conread position: | 19-436 |
| Cow position: | chr12:40910291-40910684 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 67 |
| Conread position: | 19-451 |
| Cow position: | chr12:30753718-30753317 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 292 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 57, 67 |
| Conread position: | 19-453 |
| Cow position: | chr12:19508561-19508980 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 296 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 52, 83 |
| Conread position: | 19-454 |
| Cow position: | chr12:24559356-24558927 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 288 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 81, 53 |
| Conread position: | 19-455 |
| Cow position: | chr12:3579284-3578871 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 300 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 66, 27 |
| Conread position: | 19-458 |
| Cow position: | chr12:39486422-39486017 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 19-460 |
| Cow position: | chr12:41159588-41159167 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 296 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 159, 67 |
| Conread position: | 19-460 |
| Cow position: | chr12:42181131-42181556 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 137 |
| Conread position: | 19-461 |
| Cow position: | chr12:15089514-15089072 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 113 |
| Conread position: | 19-461 |
| Cow position: | chr12:31228570-31228165 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 296 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 417, 66 |
| Conread position: | 19-462 |
| Cow position: | chr12:6210160-6210585 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 288 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 85, 67 |
| Conread position: | 19-462 |
| Cow position: | chr12:22515734-22516155 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 301 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 63, 130 |
| Conread position: | 19-462 |
| Cow position: | chr12:35368640-35368210 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 292 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 351, 132 |
| Conread position: | 19-464 |
| Cow position: | chr12:3197267-3196831 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 303 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 121, 61 |
| Conread position: | 19-464 |
| Cow position: | chr12:4008286-4008702 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 306, 40 |
| Conread position: | 19-464 |
| Cow position: | chr12:7000605-7001026 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 63 |
| Conread position: | 19-464 |
| Cow position: | chr12:17031613-17031184 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 19-464 |
| Cow position: | chr12:17080258-17079839 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 103 |
| Conread position: | 19-464 |
| Cow position: | chr12:18420924-18421348 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 108 |
| Conread position: | 19-464 |
| Cow position: | chr12:19691233-19691660 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 67 |
| Conread position: | 19-464 |
| Cow position: | chr12:29969577-29969157 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 302 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 163, 67 |
| Conread position: | 19-464 |
| Cow position: | chr12:44595812-44596236 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 293 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 73, 55 |
| Conread position: | 20-261 |
| Cow position: | chr12:13996026-13996267 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 17, 73 |
| Conread position: | 21-260 |
| Cow position: | chr12:32715041-32714811 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 62, 25 |
| Conread position: | 21-409 |
| Cow position: | chr12:41581110-41580750 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 268 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 156, 61 |
| Conread position: | 21-421 |
| Cow position: | chr12:25561366-25560992 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 21-454 |
| Cow position: | chr12:22131949-22132382 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 281 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 252, 16 |
| Conread position: | 21-460 |
| Cow position: | chr12:19869459-19869054 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 298 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 22-221 |
| Cow position: | chr12:30805848-30805658 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 22-235 |
| Cow position: | chr12:44622350-44622144 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 62, 76 |
| Conread position: | 22-239 |
| Cow position: | chr12:15358335-15358118 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 82 |
| Conread position: | 22-252 |
| Cow position: | chr12:18769074-18769297 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 20, 46 |
| Conread position: | 22-258 |
| Cow position: | chr12:29770577-29770802 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 60, 75 |
| Conread position: | 22-419 |
| Cow position: | chr12:21393701-21393321 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 254 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 252, 65 |
| Conread position: | 22-438 |
| Cow position: | chr12:31532405-31532809 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 284 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 52, 117 |
| Conread position: | 22-460 |
| Cow position: | chr12:30578458-30578877 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 290 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 159, 126 |
| Conread position: | 22-461 |
| Cow position: | chr12:29483891-29484306 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 304 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 51, 130 |
| Conread position: | 22-464 |
| Cow position: | chr12:5631884-5632296 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 121 |
| Conread position: | 22-464 |
| Cow position: | chr12:37770872-37770449 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 86 |
| Conread position: | 23-223 |
| Cow position: | chr12:26317459-26317265 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 59, 126 |
| Conread position: | 24-375 |
| Cow position: | chr12:27562835-27563194 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 56, 27 |
| Conread position: | 25-459 |
| Cow position: | chr12:5658085-5658516 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 49 |
| Conread position: | 28-261 |
| Cow position: | chr12:25320907-25320691 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 28-464 |
| Cow position: | chr12:8868886-8869313 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 121 |
| Conread position: | 30-462 |
| Cow position: | chr12:42966987-42966581 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 62 |
| Conread position: | 35-261 |
| Cow position: | chr12:19372125-19372338 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 31, 65 |
| Conread position: | 36-258 |
| Cow position: | chr12:25820449-25820662 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 146, 57 |
| Conread position: | 36-260 |
| Cow position: | chr12:28650938-28650721 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 49, 113 |
| Conread position: | 36-261 |
| Cow position: | chr12:4182710-4182928 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 140, 50 |
| Conread position: | 36-261 |
| Cow position: | chr12:26782862-26782649 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 7 |
| Conread position: | 36-435 |
| Cow position: | chr12:20326752-20326382 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 277 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 38-234 |
| Cow position: | chr12:4116468-4116284 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 38-244 |
| Cow position: | chr12:38484409-38484618 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 51, 142 |
| Conread position: | 38-261 |
| Cow position: | chr12:3950366-3950583 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 38, 49 |
| Conread position: | 38-261 |
| Cow position: | chr12:24211392-24211184 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 38-261 |
| Cow position: | chr12:30476461-30476245 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 62, 48 |
| Conread position: | 38-274 |
| Cow position: | chr12:28471618-28471391 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 225, 108 |
| Conread position: | 38-434 |
| Cow position: | chr12:31959865-31959502 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 272 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 39-258 |
| Cow position: | chr12:29995484-29995690 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 39-261 |
| Cow position: | chr12:22047448-22047237 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 143, 47 |
| Conread position: | 40-226 |
| Cow position: | chr12:5639124-5638943 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 43, 90 |
| Conread position: | 41-345 |
| Cow position: | chr12:29411513-29411809 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 45, 95 |
| Conread position: | 42-254 |
| Cow position: | chr12:18021567-18021368 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 143, 52 |
| Conread position: | 42-272 |
| Cow position: | chr12:41214346-41214563 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 59, 93 |
| Conread position: | 42-414 |
| Cow position: | chr12:18937381-18937017 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 43, 175 |
| Conread position: | 46-261 |
| Cow position: | chr12:32391819-32391613 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 40, 47 |
| Conread position: | 52-262 |
| Cow position: | chr12:17702261-17702466 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 34, 102 |
| Conread position: | 53-262 |
| Cow position: | chr12:35985103-35984898 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 17, 36 |
| Conread position: | 55-181 |
| Cow position: | chr12:28744822-28744946 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 33, 95 |
| Conread position: | 56-359 |
| Cow position: | chr12:42684984-42685280 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 28, 92 |
| Conread position: | 57-261 |
| Cow position: | chr12:3994918-3994717 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 26, 37 |
| Conread position: | 59-260 |
| Cow position: | chr12:4809261-4809074 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 65-261 |
| Cow position: | chr12:42167602-42167413 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 25, 84 |
| Conread position: | 65-393 |
| Cow position: | chr12:41979344-41979650 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 16, 25 |
| Conread position: | 65-462 |
| Cow position: | chr12:2968129-2967753 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 116, 21 |
| Conread position: | 66-460 |
| Cow position: | chr12:22481311-22480939 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 40, 6 |
| Conread position: | 75-413 |
| Cow position: | chr12:31060031-31060350 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 233 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 102, 21 |
| Conread position: | 76-285 |
| Cow position: | chr12:13156620-13156415 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 9, 43 |
| Conread position: | 77-243 |
| Cow position: | chr12:18417512-18417349 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 15, 92 |
| Conread position: | 87-259 |
| Cow position: | chr12:31841374-31841207 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 20, 62 |
| Conread position: | 88-462 |
| Cow position: | chr12:17008133-17007779 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 261 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 115, 12 |
| Conread position: | 98-438 |
| Cow position: | chr12:1848614-1848949 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 219 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 179, 53 |
| Conread position: | 99-459 |
| Cow position: | chr12:41083986-41083635 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 251 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 189, 26 |
| Conread position: | 106-426 |
| Cow position: | chr12:3880340-3880640 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 168, 42 |
| Conread position: | 109-453 |
| Cow position: | chr12:26868885-26869207 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 42 |
| Conread position: | 110-258 |
| Cow position: | chr12:5135053-5134910 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 126, 37 |
| Conread position: | 124-261 |
| Cow position: | chr12:25805216-25805342 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 151-255 |
| Cow position: | chr12:33129141-33129038 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 85 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 154-419 |
| Cow position: | chr12:4913927-4914178 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 27, 39 |
| Conread position: | 154-421 |
| Cow position: | chr12:14355089-14355345 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 27, 56 |
| Conread position: | 157-460 |
| Cow position: | chr12:7109058-7108761 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 55 |
| Conread position: | 158-460 |
| Cow position: | chr12:11102376-11102081 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 23, 54 |
| Conread position: | 161-447 |
| Cow position: | chr12:29762731-29763014 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 215 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 67, 47 |
| Conread position: | 177-459 |
| Cow position: | chr12:48437053-48437320 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 173, 32 |
| Conread position: | 211-458 |
| Cow position: | chr12:8673092-8673327 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 221-464 |
| Cow position: | chr12:45629998-45630226 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
Show alignments to all cow chromosomes.