• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
rsug23_g4.y1
        

               
Conread position:
               
6-145
               

               
Cow position:
               
chr16:50533105-50532964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
8-149
               

               
Cow position:
               
chr16:40514433-40514573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
13, 75
               

               
Conread position:
               
8-153
               

               
Cow position:
               
chr16:34220235-34220087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
13, 65
               

               
Conread position:
               
8-160
               

               
Cow position:
               
chr16:44239454-44239301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
11, 138
               

               
Conread position:
               
8-171
               

               
Cow position:
               
chr16:19052684-19052527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
13, 74
               

               
Conread position:
               
8-179
               

               
Cow position:
               
chr16:17903596-17903766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
11, 140
               

               
Conread position:
               
8-200
               

               
Cow position:
               
chr16:9905139-9904955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
13, 78
               

               
Conread position:
               
8-200
               

               
Cow position:
               
chr16:41578275-41578088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
13, 70
               

               
Conread position:
               
8-205
               

               
Cow position:
               
chr16:2417540-2417737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
13, 78
               

               
Conread position:
               
8-209
               

               
Cow position:
               
chr16:8738114-8737919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
11, 87
               

               
Conread position:
               
8-218
               

               
Cow position:
               
chr16:32970031-32970233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
11, 27
               

               
Conread position:
               
8-221
               

               
Cow position:
               
chr16:8239818-8240023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
84, 78
               

               
Conread position:
               
8-234
               

               
Cow position:
               
chr16:3047291-3047512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
64, 80
               

               
Conread position:
               
8-234
               

               
Cow position:
               
chr16:4275691-4275912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
64, 80
               

               
Conread position:
               
8-234
               

               
Cow position:
               
chr16:7550017-7549797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
14, 142
               

               
Conread position:
               
8-234
               

               
Cow position:
               
chr16:26372901-26373122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
171, 80
               

               
Conread position:
               
8-235
               

               
Cow position:
               
chr16:7418427-7418212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
8-235
               

               
Cow position:
               
chr16:10592480-10592263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
8-238
               

               
Cow position:
               
chr16:31348714-31348942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
13, 145
               

               
Conread position:
               
8-249
               

               
Cow position:
               
chr16:53037587-53037805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
45, 11
               

               
Conread position:
               
8-257
               

               
Cow position:
               
chr16:25839669-25839425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
13, 141
               

               
Conread position:
               
8-259
               

               
Cow position:
               
chr16:16597606-16597370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
13, 68
               

               
Conread position:
               
8-260
               

               
Cow position:
               
chr16:26649580-26649827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
13, 91
               

               
Conread position:
               
8-260
               

               
Cow position:
               
chr16:42778013-42777770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
13, 51
               

               
Conread position:
               
8-260
               

               
Cow position:
               
chr16:47643463-47643226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
14, 104
               

               
Conread position:
               
8-261
               

               
Cow position:
               
chr16:14106691-14106453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
13, 78
               

               
Conread position:
               
8-261
               

               
Cow position:
               
chr16:26610688-26610439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
11, 121
               

               
Conread position:
               
8-261
               

               
Cow position:
               
chr16:31117566-31117814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
11, 46
               

               
Conread position:
               
8-261
               

               
Cow position:
               
chr16:41530251-41530485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
11, 67
               

               
Conread position:
               
8-261
               

               
Cow position:
               
chr16:42444205-42443958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
11, 79
               

               
Conread position:
               
8-261
               

               
Cow position:
               
chr16:48494505-48494750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
11, 141
               

               
Conread position:
               
8-261
               

               
Cow position:
               
chr16:52275080-52275324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
13, 141
               

               
Conread position:
               
8-262
               

               
Cow position:
               
chr16:9985344-9985585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
13, 75
               

               
Conread position:
               
8-262
               

               
Cow position:
               
chr16:29557582-29557826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
8-263
               

               
Cow position:
               
chr16:35937386-35937140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
77, 21
               

               
Conread position:
               
8-283
               

               
Cow position:
               
chr16:39237995-39237728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
13, 142
               

               
Conread position:
               
8-345
               

               
Cow position:
               
chr16:7505138-7504797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
13, 141
               

               
Conread position:
               
8-387
               

               
Cow position:
               
chr16:19003484-19003824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
11, 70
               

               
Conread position:
               
8-450
               

               
Cow position:
               
chr16:33299443-33299024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
11, 66
               

               
Conread position:
               
8-454
               

               
Cow position:
               
chr16:4910476-4910906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
13, 79
               

               
Conread position:
               
8-460
               

               
Cow position:
               
chr16:24826122-24825687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 142
               

               
Conread position:
               
8-460
               

               
Cow position:
               
chr16:25170442-25170013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 89
               

               
Conread position:
               
8-461
               

               
Cow position:
               
chr16:51500980-51500552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 89
               

               
Conread position:
               
8-462
               

               
Cow position:
               
chr16:2223348-2223786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
13, 144
               

               
Conread position:
               
8-462
               

               
Cow position:
               
chr16:48340645-48341070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 141
               

               
Conread position:
               
8-462
               

               
Cow position:
               
chr16:49169332-49169761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 144
               

               
Conread position:
               
8-462
               

               
Cow position:
               
chr16:53508936-53509370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
318, 74
               

               
Conread position:
               
8-463
               

               
Cow position:
               
chr16:238316-237863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 141
               

               
Conread position:
               
8-464
               

               
Cow position:
               
chr16:9973450-9973877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 67
               

               
Conread position:
               
8-464
               

               
Cow position:
               
chr16:11105603-11105167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 141
               

               
Conread position:
               
8-464
               

               
Cow position:
               
chr16:11568074-11568493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 32
               

               
Conread position:
               
8-464
               

               
Cow position:
               
chr16:13990024-13989602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 75
               

               
Conread position:
               
8-464
               

               
Cow position:
               
chr16:31122201-31122638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 48
               

               
Conread position:
               
8-464
               

               
Cow position:
               
chr16:48398205-48398627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 122
               

               
Conread position:
               
9-464
               

               
Cow position:
               
chr16:16402276-16402712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
10-192
               

               
Cow position:
               
chr16:48146615-48146787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
11, 71
               

               
Conread position:
               
10-204
               

               
Cow position:
               
chr16:10504873-10504693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr16:31079045-31079267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
10, 101
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr16:50873124-50873335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
10, 73
               

               
Conread position:
               
11-246
               

               
Cow position:
               
chr16:8279746-8279968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
75, 10
               

               
Conread position:
               
11-259
               

               
Cow position:
               
chr16:10352928-10352675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
8, 148
               

               
Conread position:
               
11-261
               

               
Cow position:
               
chr16:5896465-5896225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
10, 27
               

               
Conread position:
               
11-261
               

               
Cow position:
               
chr16:12060462-12060219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
8, 67
               

               
Conread position:
               
11-261
               

               
Cow position:
               
chr16:13752086-13752317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
10, 69
               

               
Conread position:
               
11-265
               

               
Cow position:
               
chr16:11806717-11806474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
10, 111
               

               
Conread position:
               
11-269
               

               
Cow position:
               
chr16:42345567-42345808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
11-288
               

               
Cow position:
               
chr16:33226492-33226775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
10, 135
               

               
Conread position:
               
11-373
               

               
Cow position:
               
chr16:13689712-13689371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 138
               

               
Conread position:
               
11-423
               

               
Cow position:
               
chr16:4626345-4626737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 94
               

               
Conread position:
               
11-438
               

               
Cow position:
               
chr16:39514027-39514442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 119
               

               
Conread position:
               
11-461
               

               
Cow position:
               
chr16:51598567-51598983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
10, 31
               

               
Conread position:
               
11-464
               

               
Cow position:
               
chr16:39394615-39394202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
10, 76
               

               
Conread position:
               
12-140
               

               
Cow position:
               
chr16:22123924-22124050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
12-179
               

               
Cow position:
               
chr16:54226554-54226715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
70, 7
               

               
Conread position:
               
12-233
               

               
Cow position:
               
chr16:20069877-20069658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
9, 135
               

               
Conread position:
               
12-421
               

               
Cow position:
               
chr16:23729879-23730277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
9, 142
               

               
Conread position:
               
12-464
               

               
Cow position:
               
chr16:20025487-20025039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 7
               

               
Conread position:
               
12-464
               

               
Cow position:
               
chr16:42078803-42079222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 75
               

               
Conread position:
               
15-235
               

               
Cow position:
               
chr16:53627386-53627600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
6, 74
               

               
Conread position:
               
15-261
               

               
Cow position:
               
chr16:49336268-49336033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
161, 17
               

               
Conread position:
               
15-460
               

               
Cow position:
               
chr16:18757797-18758219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
6, 37
               

               
Conread position:
               
15-464
               

               
Cow position:
               
chr16:15824402-15824818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 48
               

               
Conread position:
               
15-464
               

               
Cow position:
               
chr16:51710096-51710515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 20
               

               
Conread position:
               
16-260
               

               
Cow position:
               
chr16:11008385-11008148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
68, 136
               

               
Conread position:
               
16-360
               

               
Cow position:
               
chr16:24672317-24672654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
164, 66
               

               
Conread position:
               
16-454
               

               
Cow position:
               
chr16:17665673-17665264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
156, 70
               

               
Conread position:
               
17-254
               

               
Cow position:
               
chr16:17982098-17982333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
82, 134
               

               
Conread position:
               
17-288
               

               
Cow position:
               
chr16:24855582-24855320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
69, 133
               

               
Conread position:
               
18-222
               

               
Cow position:
               
chr16:38243625-38243821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
158, 19
               

               
Conread position:
               
18-246
               

               
Cow position:
               
chr16:54084074-54083855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
76, 63
               

               
Conread position:
               
18-262
               

               
Cow position:
               
chr16:8322944-8323181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
18-435
               

               
Cow position:
               
chr16:33646053-33645666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
74, 109
               

               
Conread position:
               
18-458
               

               
Cow position:
               
chr16:33198401-33198843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 19
               

               
Conread position:
               
18-464
               

               
Cow position:
               
chr16:37669699-37670129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 66
               

               
Conread position:
               
19-128
               

               
Cow position:
               
chr16:11134944-11135054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
19-135
               

               
Cow position:
               
chr16:30305775-30305893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
19-139
               

               
Cow position:
               
chr16:35477378-35477499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
19-215
               

               
Cow position:
               
chr16:47964782-47964967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
19-218
               

               
Cow position:
               
chr16:48493217-48493024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
73, 139
               

               
Conread position:
               
19-218
               

               
Cow position:
               
chr16:50289189-50288994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
66, 131
               

               
Conread position:
               
19-223
               

               
Cow position:
               
chr16:42340233-42340035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
65, 70
               

               
Conread position:
               
19-225
               

               
Cow position:
               
chr16:25387013-25386819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
64, 13
               

               
Conread position:
               
19-225
               

               
Cow position:
               
chr16:42733974-42734175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
56, 132
               

               
Conread position:
               
19-232
               

               
Cow position:
               
chr16:38191510-38191303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
158, 128
               

               
Conread position:
               
19-233
               

               
Cow position:
               
chr16:50521514-50521308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
19-234
               

               
Cow position:
               
chr16:46433290-46433494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
67, 130
               

               
Conread position:
               
19-235
               

               
Cow position:
               
chr16:38708801-38709004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
206, 23
               

               
Conread position:
               
19-235
               

               
Cow position:
               
chr16:52133480-52133687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
157, 55
               

               
Conread position:
               
19-241
               

               
Cow position:
               
chr16:17945558-17945342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
63, 128
               

               
Conread position:
               
19-242
               

               
Cow position:
               
chr16:1725036-1725264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
61, 140
               

               
Conread position:
               
19-249
               

               
Cow position:
               
chr16:53048589-53048369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
56, 75
               

               
Conread position:
               
19-256
               

               
Cow position:
               
chr16:12320258-12320031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
67, 107
               

               
Conread position:
               
19-259
               

               
Cow position:
               
chr16:29608546-29608326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
19-259
               

               
Cow position:
               
chr16:52889373-52889602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
157, 100
               

               
Conread position:
               
19-260
               

               
Cow position:
               
chr16:4981340-4981574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
40, 134
               

               
Conread position:
               
19-260
               

               
Cow position:
               
chr16:8366793-8367017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
80, 99
               

               
Conread position:
               
19-260
               

               
Cow position:
               
chr16:10148319-10148088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
76, 129
               

               
Conread position:
               
19-260
               

               
Cow position:
               
chr16:26676649-26676883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
77, 46
               

               
Conread position:
               
19-260
               

               
Cow position:
               
chr16:32781403-32781169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
142, 129
               

               
Conread position:
               
19-260
               

               
Cow position:
               
chr16:41697055-41697284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
161, 67
               

               
Conread position:
               
19-261
               

               
Cow position:
               
chr16:4059393-4059165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
67, 128
               

               
Conread position:
               
19-261
               

               
Cow position:
               
chr16:11957541-11957778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
51, 133
               

               
Conread position:
               
19-261
               

               
Cow position:
               
chr16:14685356-14685583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
57, 76
               

               
Conread position:
               
19-261
               

               
Cow position:
               
chr16:21905199-21904968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
82, 27
               

               
Conread position:
               
19-261
               

               
Cow position:
               
chr16:37380307-37380077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
81, 129
               

               
Conread position:
               
19-261
               

               
Cow position:
               
chr16:43308524-43308763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
74, 34
               

               
Conread position:
               
19-261
               

               
Cow position:
               
chr16:48006456-48006685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
91, 67
               

               
Conread position:
               
19-261
               

               
Cow position:
               
chr16:49404122-49404349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
19-262
               

               
Cow position:
               
chr16:5363938-5363697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
24, 129
               

               
Conread position:
               
19-262
               

               
Cow position:
               
chr16:20633841-20634073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
57, 34
               

               
Conread position:
               
19-278
               

               
Cow position:
               
chr16:45554480-45554227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
17, 65
               

               
Conread position:
               
19-282
               

               
Cow position:
               
chr16:45678015-45677758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
76, 62
               

               
Conread position:
               
19-288
               

               
Cow position:
               
chr16:4902625-4902359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
58, 89
               

               
Conread position:
               
19-309
               

               
Cow position:
               
chr16:18402724-18402431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
67, 132
               

               
Conread position:
               
19-375
               

               
Cow position:
               
chr16:45813659-45814026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
113, 48
               

               
Conread position:
               
19-392
               

               
Cow position:
               
chr16:7077706-7078050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
94, 80
               

               
Conread position:
               
19-399
               

               
Cow position:
               
chr16:13611417-13611772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
85, 56
               

               
Conread position:
               
19-417
               

               
Cow position:
               
chr16:11791050-11790664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 88
               

               
Conread position:
               
19-417
               

               
Cow position:
               
chr16:30715541-30715155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 114
               

               
Conread position:
               
19-422
               

               
Cow position:
               
chr16:9933198-9932813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
72, 130
               

               
Conread position:
               
19-424
               

               
Cow position:
               
chr16:38663673-38664052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
163, 63
               

               
Conread position:
               
19-433
               

               
Cow position:
               
chr16:48095728-48096115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 78
               

               
Conread position:
               
19-434
               

               
Cow position:
               
chr16:42242080-42242464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 75
               

               
Conread position:
               
19-441
               

               
Cow position:
               
chr16:14754290-14754690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
255, 76
               

               
Conread position:
               
19-445
               

               
Cow position:
               
chr16:52790092-52789701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
63, 106
               

               
Conread position:
               
19-447
               

               
Cow position:
               
chr16:44744096-44744516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
158, 128
               

               
Conread position:
               
19-449
               

               
Cow position:
               
chr16:22842020-22842438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
48, 82
               

               
Conread position:
               
19-452
               

               
Cow position:
               
chr16:4145100-4144688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 18
               

               
Conread position:
               
19-455
               

               
Cow position:
               
chr16:52834851-52835246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
63, 125
               

               
Conread position:
               
19-456
               

               
Cow position:
               
chr16:600983-600568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
160, 47
               

               
Conread position:
               
19-458
               

               
Cow position:
               
chr16:40333288-40333699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 22
               

               
Conread position:
               
19-461
               

               
Cow position:
               
chr16:45731350-45731753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
67, 129
               

               
Conread position:
               
19-461
               

               
Cow position:
               
chr16:49126151-49126564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 23
               

               
Conread position:
               
19-462
               

               
Cow position:
               
chr16:7075952-7075526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
63, 129
               

               
Conread position:
               
19-462
               

               
Cow position:
               
chr16:15960253-15960696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 129
               

               
Conread position:
               
19-462
               

               
Cow position:
               
chr16:49229731-49230152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 132
               

               
Conread position:
               
19-463
               

               
Cow position:
               
chr16:16265064-16265481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
34, 19
               

               
Conread position:
               
19-463
               

               
Cow position:
               
chr16:41752537-41752964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 78
               

               
Conread position:
               
19-463
               

               
Cow position:
               
chr16:48369912-48370329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 130
               

               
Conread position:
               
19-464
               

               
Cow position:
               
chr16:3634153-3633732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
71, 119
               

               
Conread position:
               
19-464
               

               
Cow position:
               
chr16:4857062-4857470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 125
               

               
Conread position:
               
19-464
               

               
Cow position:
               
chr16:13306835-13307249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
255, 43
               

               
Conread position:
               
19-464
               

               
Cow position:
               
chr16:14242406-14241966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 18
               

               
Conread position:
               
19-464
               

               
Cow position:
               
chr16:14758775-14758331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
55, 132
               

               
Conread position:
               
19-464
               

               
Cow position:
               
chr16:17142971-17142553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
19-464
               

               
Cow position:
               
chr16:29655362-29654944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
79, 55
               

               
Conread position:
               
19-464
               

               
Cow position:
               
chr16:33704842-33704422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 17
               

               
Conread position:
               
19-464
               

               
Cow position:
               
chr16:35188290-35187871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
68, 75
               

               
Conread position:
               
19-464
               

               
Cow position:
               
chr16:40562269-40561842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 129
               

               
Conread position:
               
19-464
               

               
Cow position:
               
chr16:42092351-42092758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
436, 67
               

               
Conread position:
               
19-464
               

               
Cow position:
               
chr16:45139708-45139284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 68
               

               
Conread position:
               
19-464
               

               
Cow position:
               
chr16:50417657-50418072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 63
               

               
Conread position:
               
19-464
               

               
Cow position:
               
chr16:54579203-54578788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 10
               

               
Conread position:
               
19-464
               

               
Cow position:
               
chr16:56231864-56231438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 93
               

               
Conread position:
               
20-255
               

               
Cow position:
               
chr16:17288983-17288753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 0
               

               
Conread position:
               
20-261
               

               
Cow position:
               
chr16:8068783-8069012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
66, 127
               

               
Conread position:
               
21-139
               

               
Cow position:
               
chr16:53792785-53792901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
21-259
               

               
Cow position:
               
chr16:27249439-27249218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
79, 60
               

               
Conread position:
               
21-260
               

               
Cow position:
               
chr16:5257031-5256803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
67, 59
               

               
Conread position:
               
21-261
               

               
Cow position:
               
chr16:43105480-43105707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
156, 65
               

               
Conread position:
               
21-281
               

               
Cow position:
               
chr16:51246982-51246726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
61, 74
               

               
Conread position:
               
21-464
               

               
Cow position:
               
chr16:19643923-19643511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 109
               

               
Conread position:
               
22-235
               

               
Cow position:
               
chr16:49125495-49125701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
208, 45
               

               
Conread position:
               
22-245
               

               
Cow position:
               
chr16:45693183-45692963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
65, 50
               

               
Conread position:
               
22-261
               

               
Cow position:
               
chr16:3614780-3614554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
60, 19
               

               
Conread position:
               
22-261
               

               
Cow position:
               
chr16:14568455-14568679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
22-261
               

               
Cow position:
               
chr16:29159158-29158934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
160, 58
               

               
Conread position:
               
22-261
               

               
Cow position:
               
chr16:33753464-33753235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
68, 60
               

               
Conread position:
               
22-261
               

               
Cow position:
               
chr16:38905200-38905420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
156, 60
               

               
Conread position:
               
22-261
               

               
Cow position:
               
chr16:46655318-46655088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
54, 75
               

               
Conread position:
               
22-374
               

               
Cow position:
               
chr16:17745870-17745518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
62, 128
               

               
Conread position:
               
22-398
               

               
Cow position:
               
chr16:1548844-1549192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
197, 52
               

               
Conread position:
               
22-413
               

               
Cow position:
               
chr16:15762122-15762496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
10, 25
               

               
Conread position:
               
22-423
               

               
Cow position:
               
chr16:53428291-53427914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
159, 75
               

               
Conread position:
               
22-449
               

               
Cow position:
               
chr16:13698549-13698139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 128
               

               
Conread position:
               
22-456
               

               
Cow position:
               
chr16:43537774-43537362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 74
               

               
Conread position:
               
22-460
               

               
Cow position:
               
chr16:42217656-42218073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 59
               

               
Conread position:
               
22-460
               

               
Cow position:
               
chr16:45610019-45609606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
251, 24
               

               
Conread position:
               
22-464
               

               
Cow position:
               
chr16:22868143-22868588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
11, 73
               

               
Conread position:
               
23-181
               

               
Cow position:
               
chr16:34753927-34754079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
59, 66
               

               
Conread position:
               
23-246
               

               
Cow position:
               
chr16:38119417-38119628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
162, 70
               

               
Conread position:
               
23-261
               

               
Cow position:
               
chr16:10039811-10040032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
156, 118
               

               
Conread position:
               
23-393
               

               
Cow position:
               
chr16:47343508-47343158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
158, 81
               

               
Conread position:
               
23-459
               

               
Cow position:
               
chr16:23738214-23737806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
63, 98
               

               
Conread position:
               
23-460
               

               
Cow position:
               
chr16:14611713-14611298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
83, 21
               

               
Conread position:
               
23-464
               

               
Cow position:
               
chr16:30143173-30143598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
59, 71
               

               
Conread position:
               
24-261
               

               
Cow position:
               
chr16:13969338-13969573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
29, 126
               

               
Conread position:
               
24-261
               

               
Cow position:
               
chr16:37452582-37452812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
68, 132
               

               
Conread position:
               
24-337
               

               
Cow position:
               
chr16:20205493-20205181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
67, 127
               

               
Conread position:
               
24-464
               

               
Cow position:
               
chr16:24148193-24147774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 122
               

               
Conread position:
               
25-461
               

               
Cow position:
               
chr16:18141295-18141707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
61, 188
               

               
Conread position:
               
26-464
               

               
Cow position:
               
chr16:18679228-18678814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
67, 122
               

               
Conread position:
               
28-245
               

               
Cow position:
               
chr16:27005231-27005022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
48, 67
               

               
Conread position:
               
28-257
               

               
Cow position:
               
chr16:20476563-20476346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
149, 58
               

               
Conread position:
               
28-261
               

               
Cow position:
               
chr16:570888-571111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
28-291
               

               
Cow position:
               
chr16:51069889-51070151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
55, 26
               

               
Conread position:
               
29-260
               

               
Cow position:
               
chr16:48385372-48385595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
73, 120
               

               
Conread position:
               
29-261
               

               
Cow position:
               
chr16:53595496-53595716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
29-421
               

               
Cow position:
               
chr16:13791544-13791164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 102
               

               
Conread position:
               
29-447
               

               
Cow position:
               
chr16:8959031-8959466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
8, 15
               

               
Conread position:
               
35-464
               

               
Cow position:
               
chr16:4103141-4103543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
36-393
               

               
Cow position:
               
chr16:42253538-42253882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
38, 118
               

               
Conread position:
               
36-462
               

               
Cow position:
               
chr16:26501178-26500782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
68, 112
               

               
Conread position:
               
38-261
               

               
Cow position:
               
chr16:30036969-30037189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
44, 114
               

               
Conread position:
               
38-261
               

               
Cow position:
               
chr16:36203606-36203809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
198, 95
               

               
Conread position:
               
38-460
               

               
Cow position:
               
chr16:4712918-4712523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
38-461
               

               
Cow position:
               
chr16:18427206-18426800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
62, 34
               

               
Conread position:
               
38-462
               

               
Cow position:
               
chr16:55683318-55682911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 29
               

               
Conread position:
               
38-464
               

               
Cow position:
               
chr16:33508071-33507682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
410, 37
               

               
Conread position:
               
39-246
               

               
Cow position:
               
chr16:7785154-7784960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
39-261
               

               
Cow position:
               
chr16:424796-425009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
137, 107
               

               
Conread position:
               
39-262
               

               
Cow position:
               
chr16:39417103-39417312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
39-456
               

               
Cow position:
               
chr16:7665654-7665251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
56, 41
               

               
Conread position:
               
40-446
               

               
Cow position:
               
chr16:44973510-44973123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
145, 45
               

               
Conread position:
               
41-234
               

               
Cow position:
               
chr16:17282678-17282496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
41-234
               

               
Cow position:
               
chr16:24702869-24702681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
43, 107
               

               
Conread position:
               
42-271
               

               
Cow position:
               
chr16:35168744-35168523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
44, 91
               

               
Conread position:
               
42-458
               

               
Cow position:
               
chr16:23990466-23990863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
58, 30
               

               
Conread position:
               
43-180
               

               
Cow position:
               
chr16:8795936-8796067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
43-262
               

               
Cow position:
               
chr16:47620392-47620185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
32, 51
               

               
Conread position:
               
43-454
               

               
Cow position:
               
chr16:53613323-53612907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
31, 114
               

               
Conread position:
               
44-459
               

               
Cow position:
               
chr16:43276036-43275643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 105
               

               
Conread position:
               
45-261
               

               
Cow position:
               
chr16:35623233-35623439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
46-232
               

               
Cow position:
               
chr16:9136191-9136007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
25, 105
               

               
Conread position:
               
46-464
               

               
Cow position:
               
chr16:31159562-31159954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 42
               

               
Conread position:
               
52-245
               

               
Cow position:
               
chr16:33790831-33791010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
52-259
               

               
Cow position:
               
chr16:15808980-15808779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
8, 26
               

               
Conread position:
               
52-260
               

               
Cow position:
               
chr16:54679673-54679474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
30, 44
               

               
Conread position:
               
52-261
               

               
Cow position:
               
chr16:53830579-53830783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
26, 94
               

               
Conread position:
               
52-464
               

               
Cow position:
               
chr16:16424606-16424988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
54-464
               

               
Cow position:
               
chr16:16177820-16177436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 86
               

               
Conread position:
               
55-245
               

               
Cow position:
               
chr16:5836580-5836404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
30, 45
               

               
Conread position:
               
55-429
               

               
Cow position:
               
chr16:25287690-25288056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
237, 33
               

               
Conread position:
               
56-464
               

               
Cow position:
               
chr16:39385410-39385017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 95
               

               
Conread position:
               
57-291
               

               
Cow position:
               
chr16:8812085-8812310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
152, 23
               

               
Conread position:
               
59-429
               

               
Cow position:
               
chr16:28192067-28191721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
32, 23
               

               
Conread position:
               
67-461
               

               
Cow position:
               
chr16:40732204-40731816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
71, 5
               

               
Conread position:
               
72-261
               

               
Cow position:
               
chr16:45676869-45677046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
74-460
               

               
Cow position:
               
chr16:8652353-8651977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
38, 53
               

               
Conread position:
               
76-458
               

               
Cow position:
               
chr16:49768231-49768595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
32, 71
               

               
Conread position:
               
76-461
               

               
Cow position:
               
chr16:16544047-16543677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
198, 11
               

               
Conread position:
               
78-458
               

               
Cow position:
               
chr16:18979520-18979153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
14, 28
               

               
Conread position:
               
82-464
               

               
Cow position:
               
chr16:24142962-24143337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
45, 60
               

               
Conread position:
               
86-464
               

               
Cow position:
               
chr16:51578447-51578795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
243, 55
               

               
Conread position:
               
89-461
               

               
Cow position:
               
chr16:28816127-28816489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
189, 58
               

               
Conread position:
               
90-461
               

               
Cow position:
               
chr16:49141598-49141939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 57
               

               
Conread position:
               
92-464
               

               
Cow position:
               
chr16:6379143-6379492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
106-451
               

               
Cow position:
               
chr16:20731469-20731803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
75, 26
               

               
Conread position:
               
106-458
               

               
Cow position:
               
chr16:18936089-18936429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
85, 43
               

               
Conread position:
               
106-460
               

               
Cow position:
               
chr16:25345459-25345125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
75, 26
               

               
Conread position:
               
108-456
               

               
Cow position:
               
chr16:41837702-41838031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
73, 37
               

               
Conread position:
               
109-261
               

               
Cow position:
               
chr16:29399948-29399800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
70, 42
               

               
Conread position:
               
112-261
               

               
Cow position:
               
chr16:11422255-11422117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
116-365
               

               
Cow position:
               
chr16:901942-902180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
86, 32
               

               
Conread position:
               
127-260
               

               
Cow position:
               
chr16:33235202-33235328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
154-260
               

               
Cow position:
               
chr16:22206850-22206743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
10, 57
               

               
Conread position:
               
155-261
               

               
Cow position:
               
chr16:12085870-12085975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
157-460
               

               
Cow position:
               
chr16:1735185-1734877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
24, 166
               

               
Conread position:
               
157-460
               

               
Cow position:
               
chr16:15495878-15495588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
24, 53
               

               
Conread position:
               
158-463
               

               
Cow position:
               
chr16:9948699-9948401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
116, 51
               

               
Conread position:
               
161-382
               

               
Cow position:
               
chr16:27701338-27701547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
168, 41
               

               
Conread position:
               
177-454
               

               
Cow position:
               
chr16:16566366-16566088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
107, 31
               

               
Conread position:
               
177-454
               

               
Cow position:
               
chr16:20663035-20662763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
137, 32
               

               
Conread position:
               
177-454
               

               
Cow position:
               
chr16:45173661-45173922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
191-464
               

               
Cow position:
               
chr16:33458129-33458395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
146, 18
               

               
Conread position:
               
210-460
               

               
Cow position:
               
chr16:825857-825622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
34, 0
               
Show alignments to all cow chromosomes.