Non-Coding RNA Search

Cow genome map


           Conread name:
           rsug23_g4.y1
        

               Conread position:
               4-236
               

               Cow position:
               chr17:1113982-1113753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               5, 84
               

               Conread position:
               8-145
               

               Cow position:
               chr17:21039646-21039516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               13, 74
               

               Conread position:
               8-145
               

               Cow position:
               chr17:22016995-22017135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               8-163
               

               Cow position:
               chr17:18934348-18934190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               8-205
               

               Cow position:
               chr17:25616338-25616157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               8-225
               

               Cow position:
               chr17:20884612-20884402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               11, 89
               

               Conread position:
               8-259
               

               Cow position:
               chr17:25612179-25611942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               17, 100
               

               Conread position:
               8-260
               

               Cow position:
               chr17:4121641-4121874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               11, 61
               

               Conread position:
               8-260
               

               Cow position:
               chr17:4225411-4225643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               8-260
               

               Cow position:
               chr17:4968201-4967958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               11, 81
               

               Conread position:
               8-260
               

               Cow position:
               chr17:5422980-5423225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               194
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               13, 120
               

               Conread position:
               8-260
               

               Cow position:
               chr17:25128264-25128502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               195
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               11, 76
               

               Conread position:
               8-260
               

               Cow position:
               chr17:38647150-38646912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               11, 125
               

               Conread position:
               8-261
               

               Cow position:
               chr17:8079401-8079161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               11, 63
               

               Conread position:
               8-261
               

               Cow position:
               chr17:8836859-8837102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               77, 13
               

               Conread position:
               8-261
               

               Cow position:
               chr17:11397755-11397513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               58, 81
               

               Conread position:
               8-261
               

               Cow position:
               chr17:11664496-11664744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               13, 143
               

               Conread position:
               8-261
               

               Cow position:
               chr17:12591263-12591010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 151
               

               Conread position:
               8-261
               

               Cow position:
               chr17:15102805-15103041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               13, 88
               

               Conread position:
               8-394
               

               Cow position:
               chr17:26818369-26818725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               278
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               11, 58
               

               Conread position:
               8-426
               

               Cow position:
               chr17:11832026-11832465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               310
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               13, 116
               

               Conread position:
               8-426
               

               Cow position:
               chr17:17406224-17405817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               282
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               13, 76
               

               Conread position:
               8-431
               

               Cow position:
               chr17:38615049-38614650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               285
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               13, 140
               

               Conread position:
               8-452
               

               Cow position:
               chr17:30718329-30718747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               288
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               11, 82
               

               Conread position:
               8-456
               

               Cow position:
               chr17:32027363-32027797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 142
               

               Conread position:
               8-457
               

               Cow position:
               chr17:25901289-25900862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 142
               

               Conread position:
               8-461
               

               Cow position:
               chr17:6423853-6423388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 143
               

               Conread position:
               8-461
               

               Cow position:
               chr17:26765112-26764677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 68
               

               Conread position:
               8-462
               

               Cow position:
               chr17:24824331-24823924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 79
               

               Conread position:
               8-462
               

               Cow position:
               chr17:33288568-33288995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 118
               

               Conread position:
               8-463
               

               Cow position:
               chr17:32993535-32993955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 51
               

               Conread position:
               8-464
               

               Cow position:
               chr17:4601456-4601885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 79
               

               Conread position:
               8-464
               

               Cow position:
               chr17:5767996-5767558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 73
               

               Conread position:
               8-464
               

               Cow position:
               chr17:18860632-18861061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 138
               

               Conread position:
               8-464
               

               Cow position:
               chr17:20022425-20022860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 140
               

               Conread position:
               8-464
               

               Cow position:
               chr17:23101130-23101550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 63
               

               Conread position:
               8-464
               

               Cow position:
               chr17:24554085-24553662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 75
               

               Conread position:
               8-464
               

               Cow position:
               chr17:33933656-33934089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 142
               

               Conread position:
               9-140
               

               Cow position:
               chr17:25800793-25800925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               12, 79
               

               Conread position:
               9-257
               

               Cow position:
               chr17:3577627-3577389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               12, 113
               

               Conread position:
               9-279
               

               Cow position:
               chr17:15340665-15340924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               28, 88
               

               Conread position:
               9-458
               

               Cow position:
               chr17:11618675-11618243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 20
               

               Conread position:
               10-462
               

               Cow position:
               chr17:15333623-15334061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 140
               

               Conread position:
               11-145
               

               Cow position:
               chr17:40639033-40638902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               10, 75
               

               Conread position:
               11-234
               

               Cow position:
               chr17:21114868-21115080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               10, 92
               

               Conread position:
               11-260
               

               Cow position:
               chr17:908826-908594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               10, 55
               

               Conread position:
               11-260
               

               Cow position:
               chr17:30713431-30713194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               11, 75
               

               Conread position:
               11-260
               

               Cow position:
               chr17:31037291-31037532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               10, 139
               

               Conread position:
               11-261
               

               Cow position:
               chr17:11172529-11172768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               10, 88
               

               Conread position:
               11-261
               

               Cow position:
               chr17:24587710-24587465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               190
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               10, 137
               

               Conread position:
               11-261
               

               Cow position:
               chr17:24821947-24821713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               8, 21
               

               Conread position:
               11-262
               

               Cow position:
               chr17:32273601-32273838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               10, 71
               

               Conread position:
               11-286
               

               Cow position:
               chr17:32138338-32138600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               10, 71
               

               Conread position:
               11-387
               

               Cow position:
               chr17:3503667-3503312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               264
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               10, 30
               

               Conread position:
               11-455
               

               Cow position:
               chr17:1410152-1410580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 136
               

               Conread position:
               11-461
               

               Cow position:
               chr17:11101717-11102123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               300
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               10, 70
               

               Conread position:
               12-261
               

               Cow position:
               chr17:22806458-22806694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               9, 42
               

               Conread position:
               12-289
               

               Cow position:
               chr17:18495434-18495714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               204
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               74, 7
               

               Conread position:
               12-405
               

               Cow position:
               chr17:18109001-18109370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               271
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               70, 7
               

               Conread position:
               12-464
               

               Cow position:
               chr17:24550260-24549826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               424, 7
               

               Conread position:
               14-252
               

               Cow position:
               chr17:1275607-1275376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               74, 5
               

               Conread position:
               14-281
               

               Cow position:
               chr17:13243962-13244222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               5, 83
               

               Conread position:
               15-460
               

               Cow position:
               chr17:24077484-24077066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               300
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               167, 66
               

               Conread position:
               16-261
               

               Cow position:
               chr17:21738794-21739037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               18-201
               

               Cow position:
               chr17:25514045-25514221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               62, 78
               

               Conread position:
               18-228
               

               Cow position:
               chr17:6848875-6848681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               176, 60
               

               Conread position:
               18-250
               

               Cow position:
               chr17:35338843-35339064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               193, 59
               

               Conread position:
               18-256
               

               Cow position:
               chr17:21325410-21325178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               215, 63
               

               Conread position:
               18-260
               

               Cow position:
               chr17:21755354-21755593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               68, 56
               

               Conread position:
               18-460
               

               Cow position:
               chr17:18776709-18777129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               285
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               70, 131
               

               Conread position:
               18-464
               

               Cow position:
               chr17:30665350-30664932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               305
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               64, 80
               

               Conread position:
               18-464
               

               Cow position:
               chr17:36330879-36331305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 188
               

               Conread position:
               19-141
               

               Cow position:
               chr17:11368772-11368895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               19-145
               

               Cow position:
               chr17:5372450-5372577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               19-176
               

               Cow position:
               chr17:21478842-21478995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               67, 58
               

               Conread position:
               19-183
               

               Cow position:
               chr17:9824746-9824589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               54, 62
               

               Conread position:
               19-192
               

               Cow position:
               chr17:21489548-21489713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               157, 27
               

               Conread position:
               19-204
               

               Cow position:
               chr17:28284951-28285131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               63, 110
               

               Conread position:
               19-206
               

               Cow position:
               chr17:32009363-32009540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               66, 129
               

               Conread position:
               19-221
               

               Cow position:
               chr17:1040822-1040629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               19-222
               

               Cow position:
               chr17:31856750-31856545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               81, 160
               

               Conread position:
               19-223
               

               Cow position:
               chr17:1634415-1634606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               64, 106
               

               Conread position:
               19-228
               

               Cow position:
               chr17:21917796-21918000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               158, 31
               

               Conread position:
               19-238
               

               Cow position:
               chr17:21959611-21959822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               160, 61
               

               Conread position:
               19-245
               

               Cow position:
               chr17:41289945-41290159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               19-254
               

               Cow position:
               chr17:6329192-6328962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               63, 68
               

               Conread position:
               19-259
               

               Cow position:
               chr17:18146262-18146031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               157, 81
               

               Conread position:
               19-259
               

               Cow position:
               chr17:29157496-29157267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               65, 104
               

               Conread position:
               19-260
               

               Cow position:
               chr17:20870021-20870251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               12, 33
               

               Conread position:
               19-260
               

               Cow position:
               chr17:21003749-21003983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               181
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               73, 128
               

               Conread position:
               19-261
               

               Cow position:
               chr17:1256423-1256657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               48, 103
               

               Conread position:
               19-261
               

               Cow position:
               chr17:6624333-6624105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               161, 66
               

               Conread position:
               19-261
               

               Cow position:
               chr17:9746592-9746365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               19-261
               

               Cow position:
               chr17:12447324-12447552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               76, 62
               

               Conread position:
               19-261
               

               Cow position:
               chr17:20839489-20839714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               162, 62
               

               Conread position:
               19-261
               

               Cow position:
               chr17:24149261-24149024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               52, 78
               

               Conread position:
               19-261
               

               Cow position:
               chr17:24490618-24490368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               52, 140
               

               Conread position:
               19-261
               

               Cow position:
               chr17:26000197-25999963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               51, 9
               

               Conread position:
               19-261
               

               Cow position:
               chr17:32471704-32471947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               63, 140
               

               Conread position:
               19-261
               

               Cow position:
               chr17:41891984-41892221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               67, 131
               

               Conread position:
               19-262
               

               Cow position:
               chr17:12536388-12536622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 129
               

               Conread position:
               19-288
               

               Cow position:
               chr17:35126787-35126512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               63, 128
               

               Conread position:
               19-301
               

               Cow position:
               chr17:9911837-9911571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               67, 102
               

               Conread position:
               19-314
               

               Cow position:
               chr17:7142938-7142663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               163, 74
               

               Conread position:
               19-370
               

               Cow position:
               chr17:21243710-21244042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               71, 123
               

               Conread position:
               19-420
               

               Cow position:
               chr17:15664754-15664370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               63, 141
               

               Conread position:
               19-421
               

               Cow position:
               chr17:24974018-24973650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               19-426
               

               Cow position:
               chr17:1783528-1783909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               283
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               80, 9
               

               Conread position:
               19-426
               

               Cow position:
               chr17:40331844-40331464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               287
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               103, 51
               

               Conread position:
               19-434
               

               Cow position:
               chr17:9117721-9117335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               310, 74
               

               Conread position:
               19-454
               

               Cow position:
               chr17:24883494-24883896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               296
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               310, 55
               

               Conread position:
               19-458
               

               Cow position:
               chr17:25815681-25815271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               301
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               18, 121
               

               Conread position:
               19-460
               

               Cow position:
               chr17:13922560-13922140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 132
               

               Conread position:
               19-461
               

               Cow position:
               chr17:25541740-25542152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 120
               

               Conread position:
               19-461
               

               Cow position:
               chr17:28540107-28539703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               296
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               157, 79
               

               Conread position:
               19-462
               

               Cow position:
               chr17:1493072-1493497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               295
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               146, 119
               

               Conread position:
               19-464
               

               Cow position:
               chr17:18592519-18592094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 105
               

               Conread position:
               19-464
               

               Cow position:
               chr17:21335615-21336040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 130
               

               Conread position:
               19-464
               

               Cow position:
               chr17:21973053-21973474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 130
               

               Conread position:
               19-464
               

               Cow position:
               chr17:29715121-29715529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 89
               

               Conread position:
               20-261
               

               Cow position:
               chr17:27048232-27048006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               156, 73
               

               Conread position:
               20-262
               

               Cow position:
               chr17:32419040-32419272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               20-389
               

               Cow position:
               chr17:11296725-11296369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               54, 135
               

               Conread position:
               21-189
               

               Cow position:
               chr17:21758066-21758224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               21-192
               

               Cow position:
               chr17:23516867-23517031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               21-199
               

               Cow position:
               chr17:36864705-36864535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               63, 95
               

               Conread position:
               21-222
               

               Cow position:
               chr17:33657993-33658190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               72, 126
               

               Conread position:
               21-255
               

               Cow position:
               chr17:31231042-31231261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               21-261
               

               Cow position:
               chr17:22032623-22032847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               21-387
               

               Cow position:
               chr17:17410368-17409996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               249
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               89, 125
               

               Conread position:
               21-461
               

               Cow position:
               chr17:923954-923540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               298
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               159, 126
               

               Conread position:
               21-464
               

               Cow position:
               chr17:20157682-20157229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 78
               

               Conread position:
               22-261
               

               Cow position:
               chr17:1035523-1035754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               22-261
               

               Cow position:
               chr17:16371330-16371098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               160, 78
               

               Conread position:
               22-397
               

               Cow position:
               chr17:36217108-36217473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               254
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               66, 41
               

               Conread position:
               22-414
               

               Cow position:
               chr17:19891698-19891325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               261
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               42, 49
               

               Conread position:
               22-435
               

               Cow position:
               chr17:21292968-21293359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               276
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               71, 63
               

               Conread position:
               22-454
               

               Cow position:
               chr17:14033568-14033980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               289
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               112, 29
               

               Conread position:
               22-462
               

               Cow position:
               chr17:20032838-20033253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               301
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               49, 66
               

               Conread position:
               23-242
               

               Cow position:
               chr17:32280737-32280531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               23-254
               

               Cow position:
               chr17:14003898-14003671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               23, 131
               

               Conread position:
               23-261
               

               Cow position:
               chr17:32278835-32279060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               23-291
               

               Cow position:
               chr17:7132367-7132637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               52, 134
               

               Conread position:
               23-462
               

               Cow position:
               chr17:12059020-12059433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 15
               

               Conread position:
               24-238
               

               Cow position:
               chr17:33410943-33411156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               45, 126
               

               Conread position:
               24-405
               

               Cow position:
               chr17:9778315-9777934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               267
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               152, 57
               

               Conread position:
               24-460
               

               Cow position:
               chr17:34596012-34595599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               303
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               204, 62
               

               Conread position:
               25-260
               

               Cow position:
               chr17:10510586-10510814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               66, 49
               

               Conread position:
               25-261
               

               Cow position:
               chr17:23246279-23246057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               68, 96
               

               Conread position:
               26-261
               

               Cow position:
               chr17:21298302-21298071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               64, 35
               

               Conread position:
               26-422
               

               Cow position:
               chr17:3471489-3471115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               272
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               150, 55
               

               Conread position:
               27-261
               

               Cow position:
               chr17:44146905-44147129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               149, 59
               

               Conread position:
               27-461
               

               Cow position:
               chr17:8690372-8690791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 65
               

               Conread position:
               28-219
               

               Cow position:
               chr17:25502181-25501995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               70, 121
               

               Conread position:
               28-234
               

               Cow position:
               chr17:22564256-22564051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               70, 124
               

               Conread position:
               28-261
               

               Cow position:
               chr17:32950343-32950119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               64, 38
               

               Conread position:
               28-262
               

               Cow position:
               chr17:24761160-24761380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               71, 46
               

               Conread position:
               28-461
               

               Cow position:
               chr17:8279639-8280066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               283
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               36, 27
               

               Conread position:
               28-461
               

               Cow position:
               chr17:40771904-40771489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 54
               

               Conread position:
               28-462
               

               Cow position:
               chr17:3782115-3781694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               294
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               54, 104
               

               Conread position:
               28-464
               

               Cow position:
               chr17:30539191-30539592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               300
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               29-269
               

               Cow position:
               chr17:10491593-10491360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               152, 53
               

               Conread position:
               29-464
               

               Cow position:
               chr17:32366353-32365943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               300
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               62, 17
               

               Conread position:
               30-286
               

               Cow position:
               chr17:11215822-11216083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               64, 120
               

               Conread position:
               30-456
               

               Cow position:
               chr17:20780575-20780184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               297
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               32-261
               

               Cow position:
               chr17:34207751-34207973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               48, 117
               

               Conread position:
               32-261
               

               Cow position:
               chr17:40741712-40741494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               150, 50
               

               Conread position:
               32-462
               

               Cow position:
               chr17:21495442-21495036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 115
               

               Conread position:
               35-261
               

               Cow position:
               chr17:10458875-10459089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               35-456
               

               Cow position:
               chr17:1060996-1061391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 114
               

               Conread position:
               36-462
               

               Cow position:
               chr17:26231011-26230598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               293
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               49, 8
               

               Conread position:
               38-260
               

               Cow position:
               chr17:5006428-5006639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               48, 84
               

               Conread position:
               38-260
               

               Cow position:
               chr17:21207083-21207287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               38-260
               

               Cow position:
               chr17:24786965-24787173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               203, 48
               

               Conread position:
               38-261
               

               Cow position:
               chr17:1562722-1562927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               38-261
               

               Cow position:
               chr17:5514818-5514602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               45, 60
               

               Conread position:
               38-261
               

               Cow position:
               chr17:24580236-24580453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               50, 110
               

               Conread position:
               38-262
               

               Cow position:
               chr17:20990135-20990348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               177
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               48, 15
               

               Conread position:
               38-461
               

               Cow position:
               chr17:36791194-36790769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               297
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               44, 111
               

               Conread position:
               38-464
               

               Cow position:
               chr17:13143630-13144025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 114
               

               Conread position:
               39-224
               

               Cow position:
               chr17:27765330-27765155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               56, 110
               

               Conread position:
               39-260
               

               Cow position:
               chr17:33122149-33121939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               43, 55
               

               Conread position:
               39-425
               

               Cow position:
               chr17:1295514-1295875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               276
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               135, 54
               

               Conread position:
               39-459
               

               Cow position:
               chr17:27306217-27305825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               277, 106
               

               Conread position:
               40-426
               

               Cow position:
               chr17:11171849-11171491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               269
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               53, 26
               

               Conread position:
               41-454
               

               Cow position:
               chr17:25189342-25188950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               284
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               47, 14
               

               Conread position:
               41-455
               

               Cow position:
               chr17:20992982-20993374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 108
               

               Conread position:
               42-386
               

               Cow position:
               chr17:42347170-42347486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               40, 68
               

               Conread position:
               45-261
               

               Cow position:
               chr17:35311478-35311268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               175, 41
               

               Conread position:
               45-408
               

               Cow position:
               chr17:21312758-21313102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               46, 36
               

               Conread position:
               46-458
               

               Cow position:
               chr17:27679187-27679581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 39
               

               Conread position:
               47-261
               

               Cow position:
               chr17:25097511-25097309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               45, 39
               

               Conread position:
               47-261
               

               Cow position:
               chr17:27429628-27429425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               39, 102
               

               Conread position:
               51-453
               

               Cow position:
               chr17:9697657-9698050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               281
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               212, 5
               

               Conread position:
               52-180
               

               Cow position:
               chr17:32017832-32017956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               33, 97
               

               Conread position:
               59-261
               

               Cow position:
               chr17:4436194-4436384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               77-460
               

               Cow position:
               chr17:11056351-11056716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               258
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               99, 9
               

               Conread position:
               79-460
               

               Cow position:
               chr17:8926196-8926567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               13, 26
               

               Conread position:
               80-261
               

               Cow position:
               chr17:21697755-21697579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               14, 69
               

               Conread position:
               81-345
               

               Cow position:
               chr17:979139-979392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               101, 66
               

               Conread position:
               86-261
               

               Cow position:
               chr17:22781703-22781534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               93, 62
               

               Conread position:
               89-417
               

               Cow position:
               chr17:12216064-12216367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               34, 60
               

               Conread position:
               91-260
               

               Cow position:
               chr17:21017803-21017642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               100-464
               

               Cow position:
               chr17:38116410-38116044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               247
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               187, 35
               

               Conread position:
               106-261
               

               Cow position:
               chr17:20835588-20835440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               106-435
               

               Cow position:
               chr17:2516846-2517153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               219
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               106-461
               

               Cow position:
               chr17:27667196-27667534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 42
               

               Conread position:
               107-464
               

               Cow position:
               chr17:25168309-25167970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               256
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               74, 41
               

               Conread position:
               113-462
               

               Cow position:
               chr17:16117434-16117772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               249
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               69, 22
               

               Conread position:
               116-262
               

               Cow position:
               chr17:3182603-3182739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               154-438
               

               Cow position:
               chr17:20824370-20824642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               58, 35
               

               Conread position:
               155-462
               

               Cow position:
               chr17:8644988-8644696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 53
               

               Conread position:
               155-462
               

               Cow position:
               chr17:21039227-21038940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               224
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               160-460
               

               Cow position:
               chr17:7251993-7251711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               117, 49
               

               Conread position:
               177-461
               

               Cow position:
               chr17:27979100-27978817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               97, 34
               

               Conread position:
               178-464
               

               Cow position:
               chr17:3153843-3154112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               197-460
               

               Cow position:
               chr17:23723795-23723538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               77, 14
               

               Conread position:
               199-462
               

               Cow position:
               chr17:18266978-18266721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               61, 10
               

               Conread position:
               211-461
               

               Cow position:
               chr17:2275168-2274936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               16, 0
               
Show alignments to all cow chromosomes.
Conread position:	4-236
Cow position:	chr17:1113982-1113753 (view UCSC Genome Browser custom track)
Alignm length:	241
Alignm identity:	166
Alignm E-value:	6e-21
Alignm gaps (pig, cow):	5, 84
Conread position:	8-145
Cow position:	chr17:21039646-21039516 (view UCSC Genome Browser custom track)
Alignm length:	139
Alignm identity:	109
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	13, 74
Conread position:	8-163
Cow position:	chr17:18934348-18934190 (view UCSC Genome Browser custom track)
Alignm length:	159
Alignm identity:	118
Alignm E-value:	9e-25
Alignm gaps (pig, cow):	67, 0
Conread position:	8-205
Cow position:	chr17:25616338-25616157 (view UCSC Genome Browser custom track)
Alignm length:	198
Alignm identity:	146
Alignm E-value:	3e-24
Alignm gaps (pig, cow):	73, 0
Conread position:	8-225
Cow position:	chr17:20884612-20884402 (view UCSC Genome Browser custom track)
Alignm length:	219
Alignm identity:	154
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	11, 89
Conread position:	8-259
Cow position:	chr17:25612179-25611942 (view UCSC Genome Browser custom track)
Alignm length:	254
Alignm identity:	176
Alignm E-value:	3e-24
Alignm gaps (pig, cow):	17, 100
Conread position:	8-260
Cow position:	chr17:4121641-4121874 (view UCSC Genome Browser custom track)
Alignm length:	255
Alignm identity:	188
Alignm E-value:	2e-32
Alignm gaps (pig, cow):	11, 61
Conread position:	8-261
Cow position:	chr17:8079401-8079161 (view UCSC Genome Browser custom track)
Alignm length:	255
Alignm identity:	177
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	11, 63
Conread position:	8-394
Cow position:	chr17:26818369-26818725 (view UCSC Genome Browser custom track)
Alignm length:	391
Alignm identity:	278
Alignm E-value:	5.99756e-43
Alignm gaps (pig, cow):	11, 58
Conread position:	8-426
Cow position:	chr17:11832026-11832465 (view UCSC Genome Browser custom track)
Alignm length:	450
Alignm identity:	310
Alignm E-value:	6.00036e-42
Alignm gaps (pig, cow):	13, 116
Conread position:	8-431
Cow position:	chr17:38615049-38614650 (view UCSC Genome Browser custom track)
Alignm length:	428
Alignm identity:	285
Alignm E-value:	7e-34
Alignm gaps (pig, cow):	13, 140
Conread position:	8-452
Cow position:	chr17:30718329-30718747 (view UCSC Genome Browser custom track)
Alignm length:	449
Alignm identity:	288
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	11, 82
Conread position:	8-456
Cow position:	chr17:32027363-32027797 (view UCSC Genome Browser custom track)
Alignm length:	455
Alignm identity:	309
Alignm E-value:	0
Alignm gaps (pig, cow):	15, 142
Conread position:	8-457
Cow position:	chr17:25901289-25900862 (view UCSC Genome Browser custom track)
Alignm length:	454
Alignm identity:	317
Alignm E-value:	0
Alignm gaps (pig, cow):	13, 142
Conread position:	8-461
Cow position:	chr17:6423853-6423388 (view UCSC Genome Browser custom track)
Alignm length:	478
Alignm identity:	339
Alignm E-value:	0
Alignm gaps (pig, cow):	13, 143
Conread position:	8-462
Cow position:	chr17:24824331-24823924 (view UCSC Genome Browser custom track)
Alignm length:	457
Alignm identity:	333
Alignm E-value:	0
Alignm gaps (pig, cow):	11, 79
Conread position:	8-463
Cow position:	chr17:32993535-32993955 (view UCSC Genome Browser custom track)
Alignm length:	459
Alignm identity:	326
Alignm E-value:	0
Alignm gaps (pig, cow):	11, 51
Conread position:	8-464
Cow position:	chr17:4601456-4601885 (view UCSC Genome Browser custom track)
Alignm length:	459
Alignm identity:	327
Alignm E-value:	0
Alignm gaps (pig, cow):	13, 79
Conread position:	9-140
Cow position:	chr17:25800793-25800925 (view UCSC Genome Browser custom track)
Alignm length:	134
Alignm identity:	106
Alignm E-value:	3e-25
Alignm gaps (pig, cow):	12, 79
Conread position:	9-257
Cow position:	chr17:3577627-3577389 (view UCSC Genome Browser custom track)
Alignm length:	252
Alignm identity:	181
Alignm E-value:	2e-32
Alignm gaps (pig, cow):	12, 113