• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
rsug23_g4.y1
        

               
Conread position:
               
2-189
               

               
Cow position:
               
chr18:29991489-29991678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
19, 152
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr18:16417684-16418109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 42
               

               
Conread position:
               
4-261
               

               
Cow position:
               
chr18:56183955-56183711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
5, 80
               

               
Conread position:
               
5-261
               

               
Cow position:
               
chr18:6609840-6610083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
16, 78
               

               
Conread position:
               
7-464
               

               
Cow position:
               
chr18:28101649-28101210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 35
               

               
Conread position:
               
8-145
               

               
Cow position:
               
chr18:52402952-52403093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
8-184
               

               
Cow position:
               
chr18:1571222-1571391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
17, 30
               

               
Conread position:
               
8-185
               

               
Cow position:
               
chr18:19688039-19687864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
13, 142
               

               
Conread position:
               
8-192
               

               
Cow position:
               
chr18:3370915-3370736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
78, 139
               

               
Conread position:
               
8-217
               

               
Cow position:
               
chr18:51190584-51190777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
91, 11
               

               
Conread position:
               
8-219
               

               
Cow position:
               
chr18:16686320-16686525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
13, 142
               

               
Conread position:
               
8-222
               

               
Cow position:
               
chr18:8300034-8299822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
14, 80
               

               
Conread position:
               
8-225
               

               
Cow position:
               
chr18:9010723-9010528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
13, 52
               

               
Conread position:
               
8-229
               

               
Cow position:
               
chr18:48713566-48713351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
13, 140
               

               
Conread position:
               
8-237
               

               
Cow position:
               
chr18:18369346-18369569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
17, 29
               

               
Conread position:
               
8-246
               

               
Cow position:
               
chr18:10954483-10954263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
15, 75
               

               
Conread position:
               
8-246
               

               
Cow position:
               
chr18:55461691-55461925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
11, 139
               

               
Conread position:
               
8-256
               

               
Cow position:
               
chr18:21740800-21741035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
11, 68
               

               
Conread position:
               
8-259
               

               
Cow position:
               
chr18:42431596-42431829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
11, 134
               

               
Conread position:
               
8-261
               

               
Cow position:
               
chr18:11684997-11684762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
13, 86
               

               
Conread position:
               
8-261
               

               
Cow position:
               
chr18:38985714-38985461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
11, 145
               

               
Conread position:
               
8-262
               

               
Cow position:
               
chr18:4381309-4381065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
15, 64
               

               
Conread position:
               
8-262
               

               
Cow position:
               
chr18:25206173-25206419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
13, 50
               

               
Conread position:
               
8-272
               

               
Cow position:
               
chr18:10977196-10977450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
74, 126
               

               
Conread position:
               
8-287
               

               
Cow position:
               
chr18:15613845-15614122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
13, 74
               

               
Conread position:
               
8-288
               

               
Cow position:
               
chr18:29958149-29958421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
13, 74
               

               
Conread position:
               
8-288
               

               
Cow position:
               
chr18:39434841-39434565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
11, 34
               

               
Conread position:
               
8-388
               

               
Cow position:
               
chr18:9365936-9365575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
13, 142
               

               
Conread position:
               
8-394
               

               
Cow position:
               
chr18:49100353-49100716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
11, 140
               

               
Conread position:
               
8-404
               

               
Cow position:
               
chr18:18592488-18592099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 90
               

               
Conread position:
               
8-420
               

               
Cow position:
               
chr18:45104426-45104819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
7, 143
               

               
Conread position:
               
8-436
               

               
Cow position:
               
chr18:14048724-14048324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
13, 73
               

               
Conread position:
               
8-464
               

               
Cow position:
               
chr18:4182172-4182614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
15, 113
               

               
Conread position:
               
8-464
               

               
Cow position:
               
chr18:23766395-23766836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 141
               

               
Conread position:
               
8-464
               

               
Cow position:
               
chr18:37002647-37002219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 74
               

               
Conread position:
               
8-464
               

               
Cow position:
               
chr18:51212199-51211750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 134
               

               
Conread position:
               
8-464
               

               
Cow position:
               
chr18:55000726-55001189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 136
               

               
Conread position:
               
9-238
               

               
Cow position:
               
chr18:42432075-42432300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
26, 10
               

               
Conread position:
               
11-145
               

               
Cow position:
               
chr18:44483761-44483893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
8, 71
               

               
Conread position:
               
11-169
               

               
Cow position:
               
chr18:49038474-49038313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
11-260
               

               
Cow position:
               
chr18:33407629-33407385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
10, 137
               

               
Conread position:
               
11-441
               

               
Cow position:
               
chr18:33299916-33299512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 137
               

               
Conread position:
               
11-442
               

               
Cow position:
               
chr18:47512018-47511600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 88
               

               
Conread position:
               
11-452
               

               
Cow position:
               
chr18:20641484-20641884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
10, 71
               

               
Conread position:
               
11-460
               

               
Cow position:
               
chr18:47183281-47183697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 70
               

               
Conread position:
               
11-464
               

               
Cow position:
               
chr18:28657899-28658324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 77
               

               
Conread position:
               
11-464
               

               
Cow position:
               
chr18:45571026-45570612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 79
               

               
Conread position:
               
12-254
               

               
Cow position:
               
chr18:10904861-10904627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
7, 123
               

               
Conread position:
               
12-461
               

               
Cow position:
               
chr18:35012306-35012718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
7, 71
               

               
Conread position:
               
12-462
               

               
Cow position:
               
chr18:34527083-34527521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 104
               

               
Conread position:
               
12-462
               

               
Cow position:
               
chr18:35636335-35636761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 136
               

               
Conread position:
               
13-286
               

               
Cow position:
               
chr18:5766422-5766156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
210, 85
               

               
Conread position:
               
14-345
               

               
Cow position:
               
chr18:25647241-25647562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
68, 5
               

               
Conread position:
               
14-462
               

               
Cow position:
               
chr18:12117841-12118259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
15-425
               

               
Cow position:
               
chr18:19273089-19273493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
67, 129
               

               
Conread position:
               
16-226
               

               
Cow position:
               
chr18:19896445-19896651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
70, 133
               

               
Conread position:
               
16-464
               

               
Cow position:
               
chr18:9974322-9974741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
421, 70
               

               
Conread position:
               
17-464
               

               
Cow position:
               
chr18:11618472-11618066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
231, 42
               

               
Conread position:
               
18-148
               

               
Cow position:
               
chr18:41257898-41258029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
67, 80
               

               
Conread position:
               
18-207
               

               
Cow position:
               
chr18:43555520-43555702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
18-261
               

               
Cow position:
               
chr18:9557982-9557752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
181, 7
               

               
Conread position:
               
18-261
               

               
Cow position:
               
chr18:11183946-11183715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
48, 65
               

               
Conread position:
               
18-261
               

               
Cow position:
               
chr18:46452878-46453104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
18-309
               

               
Cow position:
               
chr18:19193361-19193645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
210, 70
               

               
Conread position:
               
18-452
               

               
Cow position:
               
chr18:4796976-4796565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 15
               

               
Conread position:
               
18-453
               

               
Cow position:
               
chr18:19762233-19761816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
90, 62
               

               
Conread position:
               
18-462
               

               
Cow position:
               
chr18:11322600-11322175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
53, 79
               

               
Conread position:
               
19-135
               

               
Cow position:
               
chr18:43796952-43797065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
19-145
               

               
Cow position:
               
chr18:31711561-31711687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
63, 119
               

               
Conread position:
               
19-193
               

               
Cow position:
               
chr18:8171082-8171250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
16, 24
               

               
Conread position:
               
19-199
               

               
Cow position:
               
chr18:48633789-48633623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
19-203
               

               
Cow position:
               
chr18:38607232-38607050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
17, 65
               

               
Conread position:
               
19-207
               

               
Cow position:
               
chr18:36201626-36201803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
73, 15
               

               
Conread position:
               
19-226
               

               
Cow position:
               
chr18:44548909-44549110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
67, 129
               

               
Conread position:
               
19-234
               

               
Cow position:
               
chr18:7109133-7108922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
157, 126
               

               
Conread position:
               
19-235
               

               
Cow position:
               
chr18:11867340-11867138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
67, 79
               

               
Conread position:
               
19-238
               

               
Cow position:
               
chr18:18918955-18919164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
163, 55
               

               
Conread position:
               
19-239
               

               
Cow position:
               
chr18:21176190-21175978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
70, 19
               

               
Conread position:
               
19-244
               

               
Cow position:
               
chr18:47828824-47828613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
19-245
               

               
Cow position:
               
chr18:23714880-23715099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
60, 54
               

               
Conread position:
               
19-254
               

               
Cow position:
               
chr18:43065533-43065290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
75, 97
               

               
Conread position:
               
19-258
               

               
Cow position:
               
chr18:4884514-4884738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
80, 62
               

               
Conread position:
               
19-260
               

               
Cow position:
               
chr18:11691405-11691637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
73, 91
               

               
Conread position:
               
19-260
               

               
Cow position:
               
chr18:30794432-30794209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
68, 90
               

               
Conread position:
               
19-260
               

               
Cow position:
               
chr18:39875256-39875484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
63, 46
               

               
Conread position:
               
19-261
               

               
Cow position:
               
chr18:32883310-32883075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
82, 64
               

               
Conread position:
               
19-261
               

               
Cow position:
               
chr18:37023547-37023783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
76, 130
               

               
Conread position:
               
19-261
               

               
Cow position:
               
chr18:42479583-42479818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
19-261
               

               
Cow position:
               
chr18:55499075-55498836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
54, 72
               

               
Conread position:
               
19-281
               

               
Cow position:
               
chr18:1954586-1954842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
119, 103
               

               
Conread position:
               
19-314
               

               
Cow position:
               
chr18:3211881-3211587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
77, 131
               

               
Conread position:
               
19-387
               

               
Cow position:
               
chr18:8104933-8105282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
16, 137
               

               
Conread position:
               
19-387
               

               
Cow position:
               
chr18:44801886-44802222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
306, 67
               

               
Conread position:
               
19-431
               

               
Cow position:
               
chr18:15880841-15881237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
63, 183
               

               
Conread position:
               
19-438
               

               
Cow position:
               
chr18:5487248-5486861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 63
               

               
Conread position:
               
19-447
               

               
Cow position:
               
chr18:55505410-55505005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 67
               

               
Conread position:
               
19-452
               

               
Cow position:
               
chr18:45903891-45904295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
19-455
               

               
Cow position:
               
chr18:56361600-56362007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
53, 75
               

               
Conread position:
               
19-456
               

               
Cow position:
               
chr18:55552970-55552557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
158, 63
               

               
Conread position:
               
19-458
               

               
Cow position:
               
chr18:7956151-7955737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
33, 131
               

               
Conread position:
               
19-461
               

               
Cow position:
               
chr18:6103094-6103515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 106
               

               
Conread position:
               
19-461
               

               
Cow position:
               
chr18:13507733-13508139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 129
               

               
Conread position:
               
19-461
               

               
Cow position:
               
chr18:29058495-29058896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
258, 33
               

               
Conread position:
               
19-462
               

               
Cow position:
               
chr18:29356621-29357051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 129
               

               
Conread position:
               
19-462
               

               
Cow position:
               
chr18:29648787-29648375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 99
               

               
Conread position:
               
19-463
               

               
Cow position:
               
chr18:20126310-20125891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 89
               

               
Conread position:
               
19-463
               

               
Cow position:
               
chr18:44262636-44262200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 134
               

               
Conread position:
               
19-464
               

               
Cow position:
               
chr18:3027356-3027785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
67, 129
               

               
Conread position:
               
19-464
               

               
Cow position:
               
chr18:6310087-6309642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
44, 83
               

               
Conread position:
               
19-464
               

               
Cow position:
               
chr18:9089705-9089290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
12, 109
               

               
Conread position:
               
19-464
               

               
Cow position:
               
chr18:26938986-26938571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
63, 115
               

               
Conread position:
               
19-464
               

               
Cow position:
               
chr18:50082254-50082649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
295, 62
               

               
Conread position:
               
20-193
               

               
Cow position:
               
chr18:10891517-10891352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
66, 77
               

               
Conread position:
               
20-258
               

               
Cow position:
               
chr18:33008065-33007833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 127
               

               
Conread position:
               
21-244
               

               
Cow position:
               
chr18:36230722-36230931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
61, 34
               

               
Conread position:
               
21-258
               

               
Cow position:
               
chr18:2863989-2864222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
71, 60
               

               
Conread position:
               
21-261
               

               
Cow position:
               
chr18:22411610-22411843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
74, 128
               

               
Conread position:
               
21-261
               

               
Cow position:
               
chr18:48828773-48829013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
72, 130
               

               
Conread position:
               
21-261
               

               
Cow position:
               
chr18:50382249-50382032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
22-144
               

               
Cow position:
               
chr18:49841282-49841158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
22-221
               

               
Cow position:
               
chr18:39001803-39001993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
154, 71
               

               
Conread position:
               
22-255
               

               
Cow position:
               
chr18:54056550-54056338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
22-258
               

               
Cow position:
               
chr18:36098212-36097978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
73, 134
               

               
Conread position:
               
22-260
               

               
Cow position:
               
chr18:5578308-5578077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
65, 21
               

               
Conread position:
               
22-261
               

               
Cow position:
               
chr18:20271019-20271246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
22-261
               

               
Cow position:
               
chr18:48453688-48453467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
22-460
               

               
Cow position:
               
chr18:14586470-14586894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
124, 51
               

               
Conread position:
               
22-461
               

               
Cow position:
               
chr18:22120885-22121293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
22-462
               

               
Cow position:
               
chr18:17005260-17004840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 127
               

               
Conread position:
               
23-288
               

               
Cow position:
               
chr18:6881354-6881613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
228, 57
               

               
Conread position:
               
23-424
               

               
Cow position:
               
chr18:20174130-20174506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
260, 52
               

               
Conread position:
               
23-455
               

               
Cow position:
               
chr18:44236204-44235791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
46, 26
               

               
Conread position:
               
23-458
               

               
Cow position:
               
chr18:7947389-7946965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
62, 47
               

               
Conread position:
               
23-459
               

               
Cow position:
               
chr18:40722652-40722240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
158, 64
               

               
Conread position:
               
23-460
               

               
Cow position:
               
chr18:4316308-4315887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 20
               

               
Conread position:
               
23-462
               

               
Cow position:
               
chr18:26355029-26355473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
157, 59
               

               
Conread position:
               
24-460
               

               
Cow position:
               
chr18:2270500-2270915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
28, 116
               

               
Conread position:
               
24-464
               

               
Cow position:
               
chr18:43283758-43284167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
83, 61
               

               
Conread position:
               
25-460
               

               
Cow position:
               
chr18:7487247-7486840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
313, 68
               

               
Conread position:
               
28-235
               

               
Cow position:
               
chr18:21205358-21205157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
202, 118
               

               
Conread position:
               
28-261
               

               
Cow position:
               
chr18:4857899-4858134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
51, 124
               

               
Conread position:
               
28-454
               

               
Cow position:
               
chr18:36458928-36458528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 59
               

               
Conread position:
               
36-260
               

               
Cow position:
               
chr18:35582111-35582327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
59, 114
               

               
Conread position:
               
36-464
               

               
Cow position:
               
chr18:49161450-49161872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
61, 120
               

               
Conread position:
               
37-288
               

               
Cow position:
               
chr18:30341195-30341438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
223, 37
               

               
Conread position:
               
38-225
               

               
Cow position:
               
chr18:56181477-56181653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
55, 110
               

               
Conread position:
               
38-261
               

               
Cow position:
               
chr18:2592180-2592399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
33, 112
               

               
Conread position:
               
38-261
               

               
Cow position:
               
chr18:24945821-24946039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
56, 92
               

               
Conread position:
               
38-461
               

               
Cow position:
               
chr18:33606615-33606218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
138, 47
               

               
Conread position:
               
38-463
               

               
Cow position:
               
chr18:56150659-56151069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
38, 115
               

               
Conread position:
               
38-464
               

               
Cow position:
               
chr18:6290767-6290369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
291, 48
               

               
Conread position:
               
39-226
               

               
Cow position:
               
chr18:15340461-15340643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
80, 113
               

               
Conread position:
               
39-234
               

               
Cow position:
               
chr18:16726634-16726443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 32
               

               
Conread position:
               
39-235
               

               
Cow position:
               
chr18:19849770-19849960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
54, 34
               

               
Conread position:
               
39-464
               

               
Cow position:
               
chr18:11680707-11680274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 36
               

               
Conread position:
               
40-268
               

               
Cow position:
               
chr18:16545480-16545700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
168, 107
               

               
Conread position:
               
40-438
               

               
Cow position:
               
chr18:29796446-29796823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
244, 54
               

               
Conread position:
               
42-260
               

               
Cow position:
               
chr18:33896444-33896648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
40, 109
               

               
Conread position:
               
42-261
               

               
Cow position:
               
chr18:35827432-35827641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
152, 58
               

               
Conread position:
               
42-456
               

               
Cow position:
               
chr18:39115153-39115573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
10, 49
               

               
Conread position:
               
44-462
               

               
Cow position:
               
chr18:42966844-42966424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 167
               

               
Conread position:
               
46-261
               

               
Cow position:
               
chr18:47868441-47868229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
74, 103
               

               
Conread position:
               
46-464
               

               
Cow position:
               
chr18:47314304-47314714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
36, 108
               

               
Conread position:
               
48-260
               

               
Cow position:
               
chr18:8164059-8164265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
37, 100
               

               
Conread position:
               
49-257
               

               
Cow position:
               
chr18:53962665-53962461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
50, 104
               

               
Conread position:
               
51-309
               

               
Cow position:
               
chr18:18339995-18340254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
43, 82
               

               
Conread position:
               
51-464
               

               
Cow position:
               
chr18:51443459-51443844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
52-219
               

               
Cow position:
               
chr18:4602043-4602198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
52-235
               

               
Cow position:
               
chr18:17380538-17380365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
30, 58
               

               
Conread position:
               
52-260
               

               
Cow position:
               
chr18:3018105-3018304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
32, 76
               

               
Conread position:
               
52-261
               

               
Cow position:
               
chr18:13360030-13359834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
130, 22
               

               
Conread position:
               
52-420
               

               
Cow position:
               
chr18:10576075-10575740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
42, 90
               

               
Conread position:
               
52-462
               

               
Cow position:
               
chr18:25626992-25626610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
86, 36
               

               
Conread position:
               
54-235
               

               
Cow position:
               
chr18:48452030-48451848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
32, 94
               

               
Conread position:
               
55-409
               

               
Cow position:
               
chr18:4666242-4666569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
20, 94
               

               
Conread position:
               
56-464
               

               
Cow position:
               
chr18:29388188-29387817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
30, 97
               

               
Conread position:
               
59-261
               

               
Cow position:
               
chr18:12023673-12023859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
75-261
               

               
Cow position:
               
chr18:48036727-48036542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
19, 57
               

               
Conread position:
               
77-449
               

               
Cow position:
               
chr18:23447134-23447479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
15, 31
               

               
Conread position:
               
79-460
               

               
Cow position:
               
chr18:11367815-11368190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
184, 68
               

               
Conread position:
               
82-460
               

               
Cow position:
               
chr18:9806359-9805970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
95, 65
               

               
Conread position:
               
88-386
               

               
Cow position:
               
chr18:19619888-19619612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 53
               

               
Conread position:
               
89-464
               

               
Cow position:
               
chr18:7649932-7649576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
91-243
               

               
Cow position:
               
chr18:35419743-35419598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
91-260
               

               
Cow position:
               
chr18:21768564-21768402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
92, 56
               

               
Conread position:
               
91-464
               

               
Cow position:
               
chr18:13293444-13293093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 58
               

               
Conread position:
               
103-464
               

               
Cow position:
               
chr18:5647169-5646827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
74, 44
               

               
Conread position:
               
106-456
               

               
Cow position:
               
chr18:23803281-23802951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
75, 26
               

               
Conread position:
               
106-460
               

               
Cow position:
               
chr18:25355785-25355450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
75, 26
               

               
Conread position:
               
109-460
               

               
Cow position:
               
chr18:27540689-27540357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
103, 23
               

               
Conread position:
               
111-461
               

               
Cow position:
               
chr18:22065440-22065774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
72, 63
               

               
Conread position:
               
123-461
               

               
Cow position:
               
chr18:33275212-33274881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
169, 30
               

               
Conread position:
               
129-416
               

               
Cow position:
               
chr18:48407694-48407422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
200, 82
               

               
Conread position:
               
131-258
               

               
Cow position:
               
chr18:46727501-46727373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
9, 80
               

               
Conread position:
               
132-464
               

               
Cow position:
               
chr18:81656-81347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
8, 76
               

               
Conread position:
               
151-446
               

               
Cow position:
               
chr18:35535404-35535683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
155-464
               

               
Cow position:
               
chr18:31082454-31082755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 17
               

               
Conread position:
               
157-413
               

               
Cow position:
               
chr18:45395879-45395628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
25, 50
               

               
Conread position:
               
157-460
               

               
Cow position:
               
chr18:17002540-17002249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
24, 34
               

               
Conread position:
               
211-455
               

               
Cow position:
               
chr18:29585426-29585672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
78, 52
               
Show alignments to all cow chromosomes.