Cow genome map
| Conread name: | rsug23_g4.y1 |
| Conread position: | 6-223 |
| Cow position: | chr26:19446200-19445984 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 15, 41 |
| Conread position: | 7-238 |
| Cow position: | chr26:14578393-14578168 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 14, 91 |
| Conread position: | 7-238 |
| Cow position: | chr26:22892379-22892602 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 14, 123 |
| Conread position: | 8-145 |
| Cow position: | chr26:677915-678051 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 11, 116 |
| Conread position: | 8-222 |
| Cow position: | chr26:9535583-9535376 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 11, 90 |
| Conread position: | 8-223 |
| Cow position: | chr26:12145053-12145262 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 13, 127 |
| Conread position: | 8-238 |
| Cow position: | chr26:34847809-34847583 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 11, 141 |
| Conread position: | 8-260 |
| Cow position: | chr26:14175347-14175105 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 13, 142 |
| Conread position: | 8-260 |
| Cow position: | chr26:32897804-32898047 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 191 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 13, 141 |
| Conread position: | 8-261 |
| Cow position: | chr26:21636972-21637214 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 13, 138 |
| Conread position: | 8-261 |
| Cow position: | chr26:31605471-31605230 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 13, 65 |
| Conread position: | 8-262 |
| Cow position: | chr26:34314756-34314498 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 140 |
| Conread position: | 8-287 |
| Cow position: | chr26:33736489-33736748 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 13, 81 |
| Conread position: | 8-419 |
| Cow position: | chr26:13021080-13021472 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 90 |
| Conread position: | 8-445 |
| Cow position: | chr26:20291627-20292030 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 93 |
| Conread position: | 8-464 |
| Cow position: | chr26:13802176-13801717 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 26 |
| Conread position: | 8-464 |
| Cow position: | chr26:32955565-32955987 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 316 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 13, 82 |
| Conread position: | 10-261 |
| Cow position: | chr26:17057741-17057505 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 12, 84 |
| Conread position: | 10-456 |
| Cow position: | chr26:21912862-21912428 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 302 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 130, 203 |
| Conread position: | 11-141 |
| Cow position: | chr26:14481492-14481621 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 10, 62 |
| Conread position: | 11-464 |
| Cow position: | chr26:26888071-26888500 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 71 |
| Conread position: | 12-260 |
| Cow position: | chr26:17148767-17148524 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 7, 55 |
| Conread position: | 15-225 |
| Cow position: | chr26:31903225-31903019 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 6, 132 |
| Conread position: | 15-261 |
| Cow position: | chr26:35704445-35704209 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 67, 74 |
| Conread position: | 16-261 |
| Cow position: | chr26:32672381-32672617 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 153, 81 |
| Conread position: | 17-225 |
| Cow position: | chr26:7156027-7155831 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 14, 82 |
| Conread position: | 17-462 |
| Cow position: | chr26:31782009-31781583 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 291 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 67, 80 |
| Conread position: | 17-464 |
| Cow position: | chr26:25394086-25393660 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 8 |
| Conread position: | 18-277 |
| Cow position: | chr26:22354467-22354221 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 163, 63 |
| Conread position: | 19-223 |
| Cow position: | chr26:12964641-12964839 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 165 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 67, 129 |
| Conread position: | 19-235 |
| Cow position: | chr26:32013686-32013471 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 65, 131 |
| Conread position: | 19-239 |
| Cow position: | chr26:16721917-16721708 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 15, 72 |
| Conread position: | 19-243 |
| Cow position: | chr26:23582892-23583109 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 19-254 |
| Cow position: | chr26:22249424-22249652 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 150, 74 |
| Conread position: | 19-259 |
| Cow position: | chr26:20013531-20013304 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 19-260 |
| Cow position: | chr26:5307196-5306956 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 181 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 63, 114 |
| Conread position: | 19-260 |
| Cow position: | chr26:32035389-32035615 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 19-261 |
| Cow position: | chr26:19774246-19774481 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 64, 82 |
| Conread position: | 19-261 |
| Cow position: | chr26:23000984-23001222 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 158, 128 |
| Conread position: | 19-261 |
| Cow position: | chr26:23315826-23315589 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 130 |
| Conread position: | 19-262 |
| Cow position: | chr26:6794198-6793962 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 147, 66 |
| Conread position: | 19-262 |
| Cow position: | chr26:33744957-33744711 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 112, 61 |
| Conread position: | 19-295 |
| Cow position: | chr26:21992155-21991877 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 157, 62 |
| Conread position: | 19-399 |
| Cow position: | chr26:27491445-27491804 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 130 |
| Conread position: | 19-438 |
| Cow position: | chr26:11263695-11263303 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 289 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 5, 75 |
| Conread position: | 19-454 |
| Cow position: | chr26:8811180-8810738 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 309 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 185, 63 |
| Conread position: | 19-461 |
| Cow position: | chr26:16783882-16783448 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 115 |
| Conread position: | 19-464 |
| Cow position: | chr26:798245-798662 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 288 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 89, 32 |
| Conread position: | 19-464 |
| Cow position: | chr26:8699994-8700417 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 310, 62 |
| Conread position: | 19-464 |
| Cow position: | chr26:9491978-9491573 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 32 |
| Conread position: | 19-464 |
| Cow position: | chr26:9867073-9867497 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 65 |
| Conread position: | 19-464 |
| Cow position: | chr26:33112333-33112748 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 255, 18 |
| Conread position: | 21-261 |
| Cow position: | chr26:20846675-20846446 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 32, 60 |
| Conread position: | 22-240 |
| Cow position: | chr26:10747580-10747786 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 68, 37 |
| Conread position: | 22-258 |
| Cow position: | chr26:25299649-25299422 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 155, 58 |
| Conread position: | 22-261 |
| Cow position: | chr26:16550034-16549803 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 203, 58 |
| Conread position: | 22-261 |
| Cow position: | chr26:25526299-25526069 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 64, 127 |
| Conread position: | 22-326 |
| Cow position: | chr26:2345597-2345905 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 172, 111 |
| Conread position: | 26-234 |
| Cow position: | chr26:13705951-13706158 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 68, 36 |
| Conread position: | 28-425 |
| Cow position: | chr26:3234418-3234799 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 267 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 92, 18 |
| Conread position: | 28-459 |
| Cow position: | chr26:29353463-29353874 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 285 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 29-261 |
| Cow position: | chr26:31779525-31779297 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 136, 58 |
| Conread position: | 37-222 |
| Cow position: | chr26:31572281-31572110 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 37-261 |
| Cow position: | chr26:6252887-6252670 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 54, 6 |
| Conread position: | 38-189 |
| Cow position: | chr26:8341489-8341345 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 48, 109 |
| Conread position: | 38-245 |
| Cow position: | chr26:3019380-3019589 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 51, 29 |
| Conread position: | 38-261 |
| Cow position: | chr26:21243136-21242926 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 63, 42 |
| Conread position: | 38-261 |
| Cow position: | chr26:25407254-25407037 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 181, 46 |
| Conread position: | 38-261 |
| Cow position: | chr26:32688470-32688252 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 139, 58 |
| Conread position: | 38-310 |
| Cow position: | chr26:10767878-10768154 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 48, 56 |
| Conread position: | 39-457 |
| Cow position: | chr26:17289240-17288819 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 294 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 56, 28 |
| Conread position: | 39-462 |
| Cow position: | chr26:6447564-6447970 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 112 |
| Conread position: | 40-261 |
| Cow position: | chr26:3181907-3182126 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 45, 113 |
| Conread position: | 55-461 |
| Cow position: | chr26:7525456-7525837 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 290 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 21, 70 |
| Conread position: | 61-462 |
| Cow position: | chr26:9692290-9692676 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 278 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 27, 90 |
| Conread position: | 68-261 |
| Cow position: | chr26:30128017-30128196 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 22 |
| Conread position: | 82-397 |
| Cow position: | chr26:19769093-19769402 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 9, 19 |
| Conread position: | 99-260 |
| Cow position: | chr26:6828144-6827990 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 106-464 |
| Cow position: | chr26:19447457-19447802 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 253 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 70, 40 |
| Conread position: | 188-464 |
| Cow position: | chr26:24239846-24239574 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 206 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 98, 21 |
Show alignments to all cow chromosomes.