Cow genome map
| Conread name: | rsug23_g4.y1 |
| Conread position: | 6-260 |
| Cow position: | chr27:13875638-13875884 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 88, 9 |
| Conread position: | 6-412 |
| Cow position: | chr27:23882464-23882077 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 271 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 176, 15 |
| Conread position: | 7-458 |
| Cow position: | chr27:26428225-26427794 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 74 |
| Conread position: | 8-207 |
| Cow position: | chr27:29504741-29504546 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 15, 142 |
| Conread position: | 8-234 |
| Cow position: | chr27:26999514-26999292 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 13, 90 |
| Conread position: | 8-235 |
| Cow position: | chr27:22569692-22569898 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 13, 55 |
| Conread position: | 8-244 |
| Cow position: | chr27:23554419-23554186 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 158, 13 |
| Conread position: | 8-258 |
| Cow position: | chr27:7212805-7212565 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 13, 140 |
| Conread position: | 8-260 |
| Cow position: | chr27:15409128-15408894 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 13, 119 |
| Conread position: | 8-260 |
| Cow position: | chr27:16780775-16781014 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 74, 139 |
| Conread position: | 8-260 |
| Cow position: | chr27:22220462-22220703 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 13, 142 |
| Conread position: | 8-260 |
| Cow position: | chr27:24014831-24014591 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 13, 110 |
| Conread position: | 8-261 |
| Cow position: | chr27:20068066-20067828 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 68, 33 |
| Conread position: | 8-279 |
| Cow position: | chr27:426878-427140 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 81 |
| Conread position: | 8-392 |
| Cow position: | chr27:7412301-7412651 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 15, 75 |
| Conread position: | 8-435 |
| Cow position: | chr27:22035469-22035066 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 125 |
| Conread position: | 8-459 |
| Cow position: | chr27:28206710-28207127 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 24 |
| Conread position: | 8-460 |
| Cow position: | chr27:20549801-20549348 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 129 |
| Conread position: | 8-463 |
| Cow position: | chr27:435142-435581 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 61 |
| Conread position: | 8-464 |
| Cow position: | chr27:299472-299043 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 312 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 74, 81 |
| Conread position: | 8-464 |
| Cow position: | chr27:14670474-14670041 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 79 |
| Conread position: | 8-464 |
| Cow position: | chr27:19387927-19388357 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 81 |
| Conread position: | 8-464 |
| Cow position: | chr27:26433899-26433474 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 307 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 13, 63 |
| Conread position: | 11-224 |
| Cow position: | chr27:20789468-20789260 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 9, 119 |
| Conread position: | 11-257 |
| Cow position: | chr27:27245443-27245204 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 8, 55 |
| Conread position: | 11-259 |
| Cow position: | chr27:20553643-20553865 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 11, 54 |
| Conread position: | 11-261 |
| Cow position: | chr27:23890849-23891088 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 8, 137 |
| Conread position: | 11-261 |
| Cow position: | chr27:26238936-26239175 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 10, 106 |
| Conread position: | 11-261 |
| Cow position: | chr27:30890202-30890441 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 188 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 8, 60 |
| Conread position: | 11-393 |
| Cow position: | chr27:12429318-12429681 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 268 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 8, 67 |
| Conread position: | 11-461 |
| Cow position: | chr27:23452373-23452811 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 317 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 10, 21 |
| Conread position: | 13-235 |
| Cow position: | chr27:27389110-27388895 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 6, 139 |
| Conread position: | 13-261 |
| Cow position: | chr27:19546600-19546352 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 69, 124 |
| Conread position: | 13-464 |
| Cow position: | chr27:706864-707312 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 308 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 223, 133 |
| Conread position: | 14-234 |
| Cow position: | chr27:1498229-1498444 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 178 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 23, 5 |
| Conread position: | 15-173 |
| Cow position: | chr27:23560115-23559959 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 68, 83 |
| Conread position: | 16-260 |
| Cow position: | chr27:8353393-8353626 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 16-455 |
| Cow position: | chr27:4835689-4835246 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 73 |
| Conread position: | 16-464 |
| Cow position: | chr27:4672930-4673355 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 136 |
| Conread position: | 18-235 |
| Cow position: | chr27:16478421-16478213 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 66, 19 |
| Conread position: | 18-246 |
| Cow position: | chr27:29312755-29312534 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 81, 130 |
| Conread position: | 18-260 |
| Cow position: | chr27:15668852-15668617 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 64, 93 |
| Conread position: | 18-324 |
| Cow position: | chr27:1122951-1123258 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 229 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 238, 10 |
| Conread position: | 18-392 |
| Cow position: | chr27:23483143-23483493 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 261 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 72, 130 |
| Conread position: | 18-427 |
| Cow position: | chr27:26413335-26412954 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 276 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 64, 71 |
| Conread position: | 18-436 |
| Cow position: | chr27:29831778-29831376 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 57 |
| Conread position: | 18-451 |
| Cow position: | chr27:27856252-27856671 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 290 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 256, 79 |
| Conread position: | 18-454 |
| Cow position: | chr27:27064520-27064114 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 292 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 256, 70 |
| Conread position: | 18-464 |
| Cow position: | chr27:22418847-22418427 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 19 |
| Conread position: | 19-172 |
| Cow position: | chr27:26407242-26407099 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 19-200 |
| Cow position: | chr27:23510907-23511084 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 63, 129 |
| Conread position: | 19-207 |
| Cow position: | chr27:20481445-20481276 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 44, 32 |
| Conread position: | 19-217 |
| Cow position: | chr27:27694852-27694662 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 182, 127 |
| Conread position: | 19-219 |
| Cow position: | chr27:26226370-26226178 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 68, 54 |
| Conread position: | 19-221 |
| Cow position: | chr27:16625817-16626010 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 63, 78 |
| Conread position: | 19-225 |
| Cow position: | chr27:19648022-19647821 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 27, 32 |
| Conread position: | 19-235 |
| Cow position: | chr27:4829892-4829675 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 28, 138 |
| Conread position: | 19-235 |
| Cow position: | chr27:22454855-22454648 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 183, 55 |
| Conread position: | 19-249 |
| Cow position: | chr27:26643605-26643817 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 63, 41 |
| Conread position: | 19-252 |
| Cow position: | chr27:17331416-17331644 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 177 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 73, 129 |
| Conread position: | 19-253 |
| Cow position: | chr27:16589782-16589570 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 19-260 |
| Cow position: | chr27:10979783-10980013 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 158, 84 |
| Conread position: | 19-260 |
| Cow position: | chr27:21669197-21668975 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 19-260 |
| Cow position: | chr27:30354424-30354194 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 62, 71 |
| Conread position: | 19-261 |
| Cow position: | chr27:6499981-6500215 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 160, 69 |
| Conread position: | 19-261 |
| Cow position: | chr27:12246574-12246809 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 93, 7 |
| Conread position: | 19-261 |
| Cow position: | chr27:16284395-16284623 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 76, 105 |
| Conread position: | 19-261 |
| Cow position: | chr27:17397534-17397296 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 129 |
| Conread position: | 19-261 |
| Cow position: | chr27:19685793-19685564 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 62, 79 |
| Conread position: | 19-261 |
| Cow position: | chr27:19717835-19718074 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 45, 77 |
| Conread position: | 19-261 |
| Cow position: | chr27:26509237-26509006 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 163, 47 |
| Conread position: | 19-261 |
| Cow position: | chr27:27641092-27640841 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 69, 145 |
| Conread position: | 19-261 |
| Cow position: | chr27:28496452-28496224 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 143, 54 |
| Conread position: | 19-261 |
| Cow position: | chr27:30988717-30988948 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 89, 63 |
| Conread position: | 19-262 |
| Cow position: | chr27:30407120-30406880 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 23, 77 |
| Conread position: | 19-283 |
| Cow position: | chr27:22513757-22513503 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 67, 82 |
| Conread position: | 19-286 |
| Cow position: | chr27:24477337-24477597 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 244, 78 |
| Conread position: | 19-399 |
| Cow position: | chr27:26150938-26151312 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 268 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 15, 110 |
| Conread position: | 19-424 |
| Cow position: | chr27:26424666-26424289 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 277 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 19-442 |
| Cow position: | chr27:11536185-11535781 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 287 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 81, 132 |
| Conread position: | 19-451 |
| Cow position: | chr27:30868820-30868413 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 19-453 |
| Cow position: | chr27:4805981-4805581 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 302 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 80, 15 |
| Conread position: | 19-455 |
| Cow position: | chr27:6073849-6074247 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 264, 63 |
| Conread position: | 19-455 |
| Cow position: | chr27:21351102-21350684 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 63 |
| Conread position: | 19-458 |
| Cow position: | chr27:1353503-1353929 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 139 |
| Conread position: | 19-458 |
| Cow position: | chr27:17472728-17473156 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 291 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 160, 128 |
| Conread position: | 19-458 |
| Cow position: | chr27:22171217-22171633 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 62 |
| Conread position: | 19-460 |
| Cow position: | chr27:815282-815701 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 55 |
| Conread position: | 19-461 |
| Cow position: | chr27:20828790-20828370 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 308 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 61, 122 |
| Conread position: | 19-461 |
| Cow position: | chr27:23472176-23472585 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 19-461 |
| Cow position: | chr27:26959694-26959287 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 299 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 380, 46 |
| Conread position: | 19-463 |
| Cow position: | chr27:4386141-4385729 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 297 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 310, 66 |
| Conread position: | 19-464 |
| Cow position: | chr27:25379909-25380337 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 295 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 22, 132 |
| Conread position: | 19-464 |
| Cow position: | chr27:27460652-27460250 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 28 |
| Conread position: | 20-261 |
| Cow position: | chr27:24321107-24321340 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 20-464 |
| Cow position: | chr27:4812962-4812510 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 130 |
| Conread position: | 21-239 |
| Cow position: | chr27:2592465-2592680 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 53, 130 |
| Conread position: | 21-258 |
| Cow position: | chr27:3306697-3306921 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 21-259 |
| Cow position: | chr27:22547477-22547256 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 21-277 |
| Cow position: | chr27:16103729-16103969 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 70, 57 |
| Conread position: | 21-450 |
| Cow position: | chr27:30550917-30551340 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 292 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 63, 127 |
| Conread position: | 21-462 |
| Cow position: | chr27:21393585-21393169 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 294 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 155, 68 |
| Conread position: | 21-464 |
| Cow position: | chr27:20641413-20641003 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 301 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 63, 104 |
| Conread position: | 22-235 |
| Cow position: | chr27:8168507-8168301 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 144, 64 |
| Conread position: | 22-261 |
| Cow position: | chr27:28921969-28921746 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 22-267 |
| Cow position: | chr27:20354513-20354735 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 22-461 |
| Cow position: | chr27:16786752-16787169 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 58 |
| Conread position: | 23-460 |
| Cow position: | chr27:3988530-3988945 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 285 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 72, 85 |
| Conread position: | 25-461 |
| Cow position: | chr27:15454134-15454550 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 105 |
| Conread position: | 25-462 |
| Cow position: | chr27:21408637-21408213 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 299 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 72, 123 |
| Conread position: | 26-461 |
| Cow position: | chr27:6522971-6523392 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 289 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 150, 55 |
| Conread position: | 27-313 |
| Cow position: | chr27:154291-154572 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 58, 119 |
| Conread position: | 28-261 |
| Cow position: | chr27:15643102-15643326 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 154, 65 |
| Conread position: | 28-261 |
| Cow position: | chr27:19896686-19896907 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 28-417 |
| Cow position: | chr27:12596699-12597096 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 274 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 29, 47 |
| Conread position: | 28-453 |
| Cow position: | chr27:27040531-27040927 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 288 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 72, 121 |
| Conread position: | 28-464 |
| Cow position: | chr27:24446228-24445816 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 105 |
| Conread position: | 29-261 |
| Cow position: | chr27:29431394-29431611 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 29-348 |
| Cow position: | chr27:27259544-27259850 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 150, 51 |
| Conread position: | 36-258 |
| Cow position: | chr27:22268438-22268652 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 38-262 |
| Cow position: | chr27:14902714-14902497 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 46, 57 |
| Conread position: | 38-383 |
| Cow position: | chr27:27844059-27843734 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 239 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 47, 112 |
| Conread position: | 38-411 |
| Cow position: | chr27:30362185-30362530 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 38-462 |
| Cow position: | chr27:23070420-23070025 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 285 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 301, 44 |
| Conread position: | 39-261 |
| Cow position: | chr27:27550794-27550597 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 40-261 |
| Cow position: | chr27:13251953-13252160 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 42-235 |
| Cow position: | chr27:4011622-4011807 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 134, 44 |
| Conread position: | 44-464 |
| Cow position: | chr27:9090854-9090461 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 48-207 |
| Cow position: | chr27:22386817-22386971 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 45, 100 |
| Conread position: | 49-261 |
| Cow position: | chr27:16871966-16871765 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 33, 100 |
| Conread position: | 52-235 |
| Cow position: | chr27:27136567-27136391 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 34, 49 |
| Conread position: | 52-257 |
| Cow position: | chr27:20548537-20548330 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 32, 161 |
| Conread position: | 52-260 |
| Cow position: | chr27:26426160-26426358 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 52-460 |
| Cow position: | chr27:25411568-25411179 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 96 |
| Conread position: | 54-233 |
| Cow position: | chr27:9697731-9697904 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 31, 83 |
| Conread position: | 59-429 |
| Cow position: | chr27:15859129-15858786 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 259 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 26, 72 |
| Conread position: | 64-261 |
| Cow position: | chr27:28164438-28164260 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 67-261 |
| Cow position: | chr27:18031100-18030906 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 22, 15 |
| Conread position: | 69-390 |
| Cow position: | chr27:26319004-26319327 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 23, 17 |
| Conread position: | 76-260 |
| Cow position: | chr27:20591956-20592133 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 9, 72 |
| Conread position: | 76-262 |
| Cow position: | chr27:23662631-23662453 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 6, 12 |
| Conread position: | 78-261 |
| Cow position: | chr27:27055553-27055728 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 82-260 |
| Cow position: | chr27:26441079-26440907 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 82-261 |
| Cow position: | chr27:24357239-24357416 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 82 |
| Conread position: | 89-278 |
| Cow position: | chr27:14343477-14343301 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 97-464 |
| Cow position: | chr27:8629876-8629534 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 102-464 |
| Cow position: | chr27:16619990-16620328 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 256 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 223, 46 |
| Conread position: | 118-464 |
| Cow position: | chr27:22179776-22179448 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 245 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 64, 29 |
| Conread position: | 125-460 |
| Cow position: | chr27:18446570-18446245 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 19, 87 |
| Conread position: | 132-460 |
| Cow position: | chr27:5915655-5915339 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 12, 59 |
| Conread position: | 151-260 |
| Cow position: | chr27:26322395-26322503 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 154-460 |
| Cow position: | chr27:2556854-2557148 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 27, 56 |
| Conread position: | 155-461 |
| Cow position: | chr27:6674285-6674572 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 39, 54 |
| Conread position: | 189-460 |
| Cow position: | chr27:28146571-28146313 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 20, 75 |
| Conread position: | 198-422 |
| Cow position: | chr27:13977304-13977092 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 85, 13 |
| Conread position: | 203-462 |
| Cow position: | chr27:13273913-13273671 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 71, 6 |
| Conread position: | 208-460 |
| Cow position: | chr27:13902197-13901958 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 55, 0 |
Show alignments to all cow chromosomes.