Cow genome map
| Conread name: | rsug23_g4.y1 |
| Conread position: | 4-256 |
| Cow position: | chr29:1124705-1124459 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 15, 78 |
| Conread position: | 5-235 |
| Cow position: | chr29:19428708-19428485 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 17, 93 |
| Conread position: | 5-252 |
| Cow position: | chr29:42363967-42364205 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 16, 99 |
| Conread position: | 6-258 |
| Cow position: | chr29:26275655-26275421 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 76, 13 |
| Conread position: | 7-260 |
| Cow position: | chr29:11562660-11562420 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 12, 76 |
| Conread position: | 7-261 |
| Cow position: | chr29:3100220-3100457 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 14, 49 |
| Conread position: | 8-140 |
| Cow position: | chr29:20770390-20770258 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 78, 10 |
| Conread position: | 8-189 |
| Cow position: | chr29:34358932-34359108 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 13, 122 |
| Conread position: | 8-200 |
| Cow position: | chr29:27329939-27329753 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 13, 79 |
| Conread position: | 8-219 |
| Cow position: | chr29:11053814-11054018 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 62, 73 |
| Conread position: | 8-220 |
| Cow position: | chr29:29176571-29176773 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 206, 35 |
| Conread position: | 8-226 |
| Cow position: | chr29:34745612-34745826 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 15, 49 |
| Conread position: | 8-234 |
| Cow position: | chr29:10018625-10018401 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 13, 141 |
| Conread position: | 8-234 |
| Cow position: | chr29:29769306-29769523 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 8-235 |
| Cow position: | chr29:22162203-22162429 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 144 |
| Conread position: | 8-245 |
| Cow position: | chr29:43099699-43099925 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 13, 143 |
| Conread position: | 8-246 |
| Cow position: | chr29:23243832-23244064 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 188 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 14, 56 |
| Conread position: | 8-258 |
| Cow position: | chr29:25737368-25737608 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 17, 139 |
| Conread position: | 8-260 |
| Cow position: | chr29:1556977-1556738 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 11, 58 |
| Conread position: | 8-260 |
| Cow position: | chr29:5098720-5098956 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 13, 75 |
| Conread position: | 8-261 |
| Cow position: | chr29:8926415-8926654 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 13, 117 |
| Conread position: | 8-261 |
| Cow position: | chr29:22613476-22613232 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 11, 143 |
| Conread position: | 8-288 |
| Cow position: | chr29:10235088-10235359 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 12, 20 |
| Conread position: | 8-313 |
| Cow position: | chr29:4520382-4520088 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 11, 21 |
| Conread position: | 8-417 |
| Cow position: | chr29:9709741-9709361 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 287 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 13, 80 |
| Conread position: | 8-434 |
| Cow position: | chr29:29975084-29974690 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 75 |
| Conread position: | 8-449 |
| Cow position: | chr29:12680202-12679754 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 78 |
| Conread position: | 8-453 |
| Cow position: | chr29:40117618-40117197 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 149 |
| Conread position: | 8-464 |
| Cow position: | chr29:4874833-4875289 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 141 |
| Conread position: | 8-464 |
| Cow position: | chr29:36530913-36530479 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 73 |
| Conread position: | 9-232 |
| Cow position: | chr29:34773692-34773904 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 12, 74 |
| Conread position: | 9-234 |
| Cow position: | chr29:29942682-29942905 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 12, 140 |
| Conread position: | 9-256 |
| Cow position: | chr29:20910647-20910891 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 11, 38 |
| Conread position: | 9-464 |
| Cow position: | chr29:2984936-2984472 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 316 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 10, 140 |
| Conread position: | 11-249 |
| Cow position: | chr29:27588966-27588738 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 8, 40 |
| Conread position: | 11-434 |
| Cow position: | chr29:5892888-5892495 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 105 |
| Conread position: | 13-348 |
| Cow position: | chr29:478148-477822 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 70, 103 |
| Conread position: | 15-249 |
| Cow position: | chr29:26771477-26771249 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 136 |
| Conread position: | 15-252 |
| Cow position: | chr29:14484498-14484732 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 6, 138 |
| Conread position: | 15-261 |
| Cow position: | chr29:3237315-3237553 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 159, 0 |
| Conread position: | 15-460 |
| Cow position: | chr29:10838989-10838560 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 309 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 35, 19 |
| Conread position: | 15-464 |
| Cow position: | chr29:24624287-24623858 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 31 |
| Conread position: | 16-220 |
| Cow position: | chr29:12025432-12025629 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 21, 28 |
| Conread position: | 16-261 |
| Cow position: | chr29:28446212-28446455 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 66, 38 |
| Conread position: | 16-401 |
| Cow position: | chr29:16657736-16657369 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 269 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 19, 71 |
| Conread position: | 16-464 |
| Cow position: | chr29:19762308-19761890 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 335, 64 |
| Conread position: | 18-288 |
| Cow position: | chr29:31594092-31594359 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 197 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 64, 130 |
| Conread position: | 18-306 |
| Cow position: | chr29:6926044-6925753 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 187, 68 |
| Conread position: | 18-454 |
| Cow position: | chr29:43009049-43009487 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 52 |
| Conread position: | 18-461 |
| Cow position: | chr29:1022331-1021890 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 296 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 163, 67 |
| Conread position: | 18-464 |
| Cow position: | chr29:4480138-4480559 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 17 |
| Conread position: | 19-208 |
| Cow position: | chr29:10456528-10456706 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 19-227 |
| Cow position: | chr29:31674667-31674465 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 67, 109 |
| Conread position: | 19-234 |
| Cow position: | chr29:27826557-27826353 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 63, 78 |
| Conread position: | 19-254 |
| Cow position: | chr29:36183315-36183085 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 175, 67 |
| Conread position: | 19-261 |
| Cow position: | chr29:699581-699811 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 158, 81 |
| Conread position: | 19-261 |
| Cow position: | chr29:18735605-18735838 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 72, 67 |
| Conread position: | 19-261 |
| Cow position: | chr29:19792242-19792476 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 217, 66 |
| Conread position: | 19-261 |
| Cow position: | chr29:22778141-22778377 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 157, 128 |
| Conread position: | 19-261 |
| Cow position: | chr29:23698011-23697783 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 104, 70 |
| Conread position: | 19-261 |
| Cow position: | chr29:24103507-24103744 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 63, 9 |
| Conread position: | 19-261 |
| Cow position: | chr29:25474957-25474712 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 80, 56 |
| Conread position: | 19-261 |
| Cow position: | chr29:31929023-31928783 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 51, 134 |
| Conread position: | 19-261 |
| Cow position: | chr29:40166278-40166047 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 67, 108 |
| Conread position: | 19-261 |
| Cow position: | chr29:41747482-41747245 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 65, 138 |
| Conread position: | 19-262 |
| Cow position: | chr29:14501627-14501394 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 160, 123 |
| Conread position: | 19-262 |
| Cow position: | chr29:23983921-23984159 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 130 |
| Conread position: | 19-276 |
| Cow position: | chr29:26042662-26042419 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 146, 80 |
| Conread position: | 19-287 |
| Cow position: | chr29:10058501-10058770 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 62, 109 |
| Conread position: | 19-288 |
| Cow position: | chr29:10156268-10156533 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 68, 22 |
| Conread position: | 19-288 |
| Cow position: | chr29:39111277-39111552 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 52, 85 |
| Conread position: | 19-291 |
| Cow position: | chr29:12783926-12784179 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 157, 68 |
| Conread position: | 19-311 |
| Cow position: | chr29:35292126-35291829 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 210 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 66, 126 |
| Conread position: | 19-400 |
| Cow position: | chr29:32521908-32521542 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 91, 117 |
| Conread position: | 19-450 |
| Cow position: | chr29:15738306-15738715 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 290 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 274, 128 |
| Conread position: | 19-458 |
| Cow position: | chr29:465365-465778 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 302 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 160, 66 |
| Conread position: | 19-458 |
| Cow position: | chr29:2744233-2744651 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 131 |
| Conread position: | 19-458 |
| Cow position: | chr29:43328678-43328259 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 128 |
| Conread position: | 19-461 |
| Cow position: | chr29:15940596-15941020 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 296 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 69, 140 |
| Conread position: | 19-461 |
| Cow position: | chr29:16609782-16609358 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 303 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 72, 131 |
| Conread position: | 19-461 |
| Cow position: | chr29:17607452-17607034 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 127 |
| Conread position: | 19-462 |
| Cow position: | chr29:86977-87396 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 132 |
| Conread position: | 19-462 |
| Cow position: | chr29:1325476-1325055 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 299 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 86, 9 |
| Conread position: | 19-462 |
| Cow position: | chr29:45005595-45005999 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 308 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 72, 22 |
| Conread position: | 19-463 |
| Cow position: | chr29:24578897-24578468 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 299 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 60, 139 |
| Conread position: | 19-464 |
| Cow position: | chr29:9912210-9911777 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 295 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 70, 132 |
| Conread position: | 19-464 |
| Cow position: | chr29:17109994-17109587 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 311 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 244, 74 |
| Conread position: | 19-464 |
| Cow position: | chr29:24952722-24952302 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 301 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 19-464 |
| Cow position: | chr29:26615686-26616121 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 255, 127 |
| Conread position: | 19-464 |
| Cow position: | chr29:28196974-28197393 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 301 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 63, 17 |
| Conread position: | 19-464 |
| Cow position: | chr29:35501620-35502031 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 433, 69 |
| Conread position: | 19-464 |
| Cow position: | chr29:36217149-36216734 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 20-246 |
| Cow position: | chr29:5186460-5186679 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 178 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 65, 113 |
| Conread position: | 20-271 |
| Cow position: | chr29:11434152-11433916 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 156, 54 |
| Conread position: | 21-217 |
| Cow position: | chr29:29314620-29314810 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 61, 127 |
| Conread position: | 21-238 |
| Cow position: | chr29:13639335-13639544 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 73, 92 |
| Conread position: | 21-252 |
| Cow position: | chr29:24252270-24252047 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 86, 23 |
| Conread position: | 21-257 |
| Cow position: | chr29:32211035-32211251 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 21-258 |
| Cow position: | chr29:21000669-21000447 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 21-261 |
| Cow position: | chr29:22714691-22714923 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 61, 25 |
| Conread position: | 21-461 |
| Cow position: | chr29:32290641-32290220 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 289 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 267, 65 |
| Conread position: | 21-464 |
| Cow position: | chr29:732653-732241 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 128 |
| Conread position: | 21-464 |
| Cow position: | chr29:2623447-2623899 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 315 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 70, 122 |
| Conread position: | 22-221 |
| Cow position: | chr29:26986961-26986773 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 55, 32 |
| Conread position: | 22-257 |
| Cow position: | chr29:17301565-17301333 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 63, 128 |
| Conread position: | 22-259 |
| Cow position: | chr29:26985258-26985031 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 66, 45 |
| Conread position: | 22-261 |
| Cow position: | chr29:40096999-40096761 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 28, 67 |
| Conread position: | 22-453 |
| Cow position: | chr29:17076-17467 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 294 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 72, 94 |
| Conread position: | 22-454 |
| Cow position: | chr29:35485277-35484870 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 292 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 159, 78 |
| Conread position: | 22-458 |
| Cow position: | chr29:21534641-21535063 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 283 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 55, 50 |
| Conread position: | 22-461 |
| Cow position: | chr29:28868670-28868249 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 299 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 71, 99 |
| Conread position: | 23-234 |
| Cow position: | chr29:41530880-41530677 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 76, 125 |
| Conread position: | 23-261 |
| Cow position: | chr29:30440963-30440730 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 78, 9 |
| Conread position: | 23-460 |
| Cow position: | chr29:20255431-20255015 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 287 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 82, 21 |
| Conread position: | 24-261 |
| Cow position: | chr29:22585372-22585603 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 57, 70 |
| Conread position: | 24-462 |
| Cow position: | chr29:17409364-17408950 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 296 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 157, 64 |
| Conread position: | 27-454 |
| Cow position: | chr29:11685033-11684626 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 289 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 247, 59 |
| Conread position: | 28-249 |
| Cow position: | chr29:25092135-25091925 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 57, 23 |
| Conread position: | 28-249 |
| Cow position: | chr29:28166193-28166401 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 205, 56 |
| Conread position: | 28-261 |
| Cow position: | chr29:11915852-11915621 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 46, 124 |
| Conread position: | 28-423 |
| Cow position: | chr29:9685982-9686353 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 273 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 246, 18 |
| Conread position: | 28-455 |
| Cow position: | chr29:32655404-32655816 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 284 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 61, 44 |
| Conread position: | 28-460 |
| Cow position: | chr29:27834014-27833606 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 286 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 153, 60 |
| Conread position: | 28-461 |
| Cow position: | chr29:39567711-39567304 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 66 |
| Conread position: | 29-464 |
| Cow position: | chr29:32963573-32963157 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 263, 41 |
| Conread position: | 30-261 |
| Cow position: | chr29:20903260-20903483 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 32-405 |
| Cow position: | chr29:20178113-20178456 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 248 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 142, 54 |
| Conread position: | 38-258 |
| Cow position: | chr29:30188322-30188533 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 138, 109 |
| Conread position: | 38-261 |
| Cow position: | chr29:42886406-42886185 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 42, 111 |
| Conread position: | 38-454 |
| Cow position: | chr29:13028459-13028060 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 275 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 49, 114 |
| Conread position: | 38-461 |
| Cow position: | chr29:94542-94949 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 302 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 144, 33 |
| Conread position: | 38-461 |
| Cow position: | chr29:24345433-24345846 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 5 |
| Conread position: | 42-234 |
| Cow position: | chr29:40615509-40615694 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 7, 41 |
| Conread position: | 42-261 |
| Cow position: | chr29:7040837-7041034 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 42-278 |
| Cow position: | chr29:9718756-9718987 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 40, 105 |
| Conread position: | 43-419 |
| Cow position: | chr29:40891686-40892054 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 249 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 139, 37 |
| Conread position: | 45-461 |
| Cow position: | chr29:28195507-28195904 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 283 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 140, 41 |
| Conread position: | 52-258 |
| Cow position: | chr29:40763679-40763877 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 34, 59 |
| Conread position: | 54-261 |
| Cow position: | chr29:10818435-10818632 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 56-455 |
| Cow position: | chr29:2485297-2484919 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 125, 30 |
| Conread position: | 56-462 |
| Cow position: | chr29:8125591-8125977 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 40 |
| Conread position: | 57-261 |
| Cow position: | chr29:5109206-5109406 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 44 |
| Conread position: | 66-419 |
| Cow position: | chr29:20626562-20626237 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 115, 9 |
| Conread position: | 67-234 |
| Cow position: | chr29:44682110-44682269 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 24, 81 |
| Conread position: | 72-460 |
| Cow position: | chr29:13589729-13590092 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 266 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 137, 15 |
| Conread position: | 72-464 |
| Cow position: | chr29:19338970-19338575 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 76 |
| Conread position: | 85-435 |
| Cow position: | chr29:4066056-4065677 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 272 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 145, 63 |
| Conread position: | 86-460 |
| Cow position: | chr29:32544333-32543969 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 26, 41 |
| Conread position: | 86-461 |
| Cow position: | chr29:16083098-16082736 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 242 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 297, 26 |
| Conread position: | 103-453 |
| Cow position: | chr29:13615685-13616032 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 62, 52 |
| Conread position: | 106-460 |
| Cow position: | chr29:5238672-5238337 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 75, 40 |
| Conread position: | 106-460 |
| Cow position: | chr29:5241582-5241247 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 75, 40 |
| Conread position: | 106-460 |
| Cow position: | chr29:16152770-16152429 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 231 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 75, 25 |
| Conread position: | 131-464 |
| Cow position: | chr29:31943809-31943460 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 60, 9 |
| Conread position: | 154-464 |
| Cow position: | chr29:23155161-23154840 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 221 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 109, 55 |
| Conread position: | 157-460 |
| Cow position: | chr29:19399092-19398802 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 24, 53 |
| Conread position: | 157-461 |
| Cow position: | chr29:4755106-4755404 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 203 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 10, 18 |
| Conread position: | 158-460 |
| Cow position: | chr29:17078148-17077857 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 23, 33 |
| Conread position: | 162-460 |
| Cow position: | chr29:18085492-18085194 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 74, 46 |
| Conread position: | 197-460 |
| Cow position: | chr29:15576190-15576439 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 211-461 |
| Cow position: | chr29:18772743-18772987 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 52, 0 |
Show alignments to all cow chromosomes.