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Cow genome map

           
Conread name:
           
rsug23_g4.y1
        

               
Conread position:
               
3-261
               

               
Cow position:
               
chr7:41879394-41879654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
17, 199
               

               
Conread position:
               
3-454
               

               
Cow position:
               
chr7:49648455-49648031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
5-180
               

               
Cow position:
               
chr7:35300325-35300495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 64
               

               
Conread position:
               
6-261
               

               
Cow position:
               
chr7:66179698-66179951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 77
               

               
Conread position:
               
6-454
               

               
Cow position:
               
chr7:42244608-42245044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 76
               

               
Conread position:
               
7-242
               

               
Cow position:
               
chr7:40074775-40074544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
19, 150
               

               
Conread position:
               
8-128
               

               
Cow position:
               
chr7:10759623-10759744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
8-144
               

               
Cow position:
               
chr7:51644741-51644602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
11, 61
               

               
Conread position:
               
8-153
               

               
Cow position:
               
chr7:57593520-57593373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
8-188
               

               
Cow position:
               
chr7:8102511-8102338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
13, 52
               

               
Conread position:
               
8-188
               

               
Cow position:
               
chr7:10381894-10381718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
11, 141
               

               
Conread position:
               
8-189
               

               
Cow position:
               
chr7:8658605-8658429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
13, 102
               

               
Conread position:
               
8-215
               

               
Cow position:
               
chr7:59168355-59168161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
11, 74
               

               
Conread position:
               
8-216
               

               
Cow position:
               
chr7:28544267-28544065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
13, 83
               

               
Conread position:
               
8-218
               

               
Cow position:
               
chr7:14353698-14353902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
13, 82
               

               
Conread position:
               
8-221
               

               
Cow position:
               
chr7:15559777-15559576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
12, 105
               

               
Conread position:
               
8-229
               

               
Cow position:
               
chr7:49903863-49903652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 137
               

               
Conread position:
               
8-238
               

               
Cow position:
               
chr7:8272752-8272526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
11, 141
               

               
Conread position:
               
8-238
               

               
Cow position:
               
chr7:17713381-17713605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
13, 142
               

               
Conread position:
               
8-247
               

               
Cow position:
               
chr7:38263763-38263526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
13, 24
               

               
Conread position:
               
8-256
               

               
Cow position:
               
chr7:23762065-23761803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 212
               

               
Conread position:
               
8-256
               

               
Cow position:
               
chr7:48714944-48714701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
13, 139
               

               
Conread position:
               
8-258
               

               
Cow position:
               
chr7:53053313-53053554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
13, 141
               

               
Conread position:
               
8-260
               

               
Cow position:
               
chr7:2923738-2923491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
13, 141
               

               
Conread position:
               
8-260
               

               
Cow position:
               
chr7:4764935-4764690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
14, 55
               

               
Conread position:
               
8-260
               

               
Cow position:
               
chr7:39416000-39415754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 126
               

               
Conread position:
               
8-260
               

               
Cow position:
               
chr7:45331628-45331394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 24
               

               
Conread position:
               
8-260
               

               
Cow position:
               
chr7:46818404-46818649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
13, 120
               

               
Conread position:
               
8-260
               

               
Cow position:
               
chr7:48406405-48406651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
13, 78
               

               
Conread position:
               
8-260
               

               
Cow position:
               
chr7:54013465-54013206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
34, 68
               

               
Conread position:
               
8-261
               

               
Cow position:
               
chr7:3336460-3336703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
13, 67
               

               
Conread position:
               
8-261
               

               
Cow position:
               
chr7:24991357-24991124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
14, 89
               

               
Conread position:
               
8-282
               

               
Cow position:
               
chr7:39904187-39903908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
13, 124
               

               
Conread position:
               
8-288
               

               
Cow position:
               
chr7:29479617-29479336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
77, 62
               

               
Conread position:
               
8-320
               

               
Cow position:
               
chr7:50860098-50859800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
13, 44
               

               
Conread position:
               
8-442
               

               
Cow position:
               
chr7:17757123-17756725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
155, 79
               

               
Conread position:
               
8-455
               

               
Cow position:
               
chr7:27509805-27509385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 75
               

               
Conread position:
               
8-460
               

               
Cow position:
               
chr7:19267280-19267707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
11, 30
               

               
Conread position:
               
8-460
               

               
Cow position:
               
chr7:42593188-42593646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
11, 140
               

               
Conread position:
               
8-460
               

               
Cow position:
               
chr7:43908296-43907874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
11, 142
               

               
Conread position:
               
8-460
               

               
Cow position:
               
chr7:54712511-54712078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 141
               

               
Conread position:
               
8-462
               

               
Cow position:
               
chr7:34428666-34428221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 148
               

               
Conread position:
               
8-463
               

               
Cow position:
               
chr7:20534962-20534541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 100
               

               
Conread position:
               
8-463
               

               
Cow position:
               
chr7:31170858-31171288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 142
               

               
Conread position:
               
8-463
               

               
Cow position:
               
chr7:32894158-32894594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 144
               

               
Conread position:
               
8-463
               

               
Cow position:
               
chr7:36665415-36664988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 58
               

               
Conread position:
               
8-464
               

               
Cow position:
               
chr7:23205539-23205975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 139
               

               
Conread position:
               
8-464
               

               
Cow position:
               
chr7:23646701-23646266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 95
               

               
Conread position:
               
8-464
               

               
Cow position:
               
chr7:26631722-26632152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 87
               

               
Conread position:
               
8-464
               

               
Cow position:
               
chr7:28917181-28916734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 142
               

               
Conread position:
               
8-464
               

               
Cow position:
               
chr7:35893505-35893075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 30
               

               
Conread position:
               
8-464
               

               
Cow position:
               
chr7:36996452-36996017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
13, 70
               

               
Conread position:
               
8-464
               

               
Cow position:
               
chr7:45593129-45592698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 75
               

               
Conread position:
               
8-464
               

               
Cow position:
               
chr7:46856873-46857296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 101
               

               
Conread position:
               
8-464
               

               
Cow position:
               
chr7:48243762-48243335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 59
               

               
Conread position:
               
8-464
               

               
Cow position:
               
chr7:53697817-53698259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 143
               

               
Conread position:
               
8-464
               

               
Cow position:
               
chr7:64364438-64364869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
13, 75
               

               
Conread position:
               
9-261
               

               
Cow position:
               
chr7:29510033-29509802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
12, 65
               

               
Conread position:
               
10-459
               

               
Cow position:
               
chr7:4129693-4130129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 139
               

               
Conread position:
               
10-464
               

               
Cow position:
               
chr7:10122786-10122369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 71
               

               
Conread position:
               
10-464
               

               
Cow position:
               
chr7:62793884-62793442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 149
               

               
Conread position:
               
11-180
               

               
Cow position:
               
chr7:33298357-33298519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
10, 34
               

               
Conread position:
               
11-205
               

               
Cow position:
               
chr7:42637058-42636880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
8, 36
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr7:11714339-11714556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
9, 24
               

               
Conread position:
               
11-239
               

               
Cow position:
               
chr7:31094260-31094482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
10, 141
               

               
Conread position:
               
11-252
               

               
Cow position:
               
chr7:22793431-22793202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
10, 67
               

               
Conread position:
               
11-259
               

               
Cow position:
               
chr7:68051187-68050948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
8, 39
               

               
Conread position:
               
11-260
               

               
Cow position:
               
chr7:40051672-40051910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
10, 56
               

               
Conread position:
               
11-398
               

               
Cow position:
               
chr7:32915202-32914839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
10, 92
               

               
Conread position:
               
11-430
               

               
Cow position:
               
chr7:49751216-49750819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 89
               

               
Conread position:
               
11-461
               

               
Cow position:
               
chr7:40121559-40121111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 144
               

               
Conread position:
               
11-462
               

               
Cow position:
               
chr7:27079714-27079300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 83
               

               
Conread position:
               
11-463
               

               
Cow position:
               
chr7:47046543-47046113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
10, 65
               

               
Conread position:
               
11-464
               

               
Cow position:
               
chr7:56820495-56820916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 55
               

               
Conread position:
               
11-464
               

               
Cow position:
               
chr7:68170513-68170948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 138
               

               
Conread position:
               
12-464
               

               
Cow position:
               
chr7:41327952-41328362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
9, 137
               

               
Conread position:
               
14-255
               

               
Cow position:
               
chr7:4720146-4720381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
49, 5
               

               
Conread position:
               
15-261
               

               
Cow position:
               
chr7:6706383-6706145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
8, 87
               

               
Conread position:
               
15-464
               

               
Cow position:
               
chr7:52295212-52294794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
30, 69
               

               
Conread position:
               
16-145
               

               
Cow position:
               
chr7:29121984-29121855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
104, 77
               

               
Conread position:
               
16-224
               

               
Cow position:
               
chr7:5238002-5238188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
179, 66
               

               
Conread position:
               
16-234
               

               
Cow position:
               
chr7:63946505-63946708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
16-235
               

               
Cow position:
               
chr7:21565480-21565685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
79, 22
               

               
Conread position:
               
16-260
               

               
Cow position:
               
chr7:51319880-51319645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 28
               

               
Conread position:
               
16-261
               

               
Cow position:
               
chr7:25015039-25015274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 17
               

               
Conread position:
               
16-401
               

               
Cow position:
               
chr7:49417687-49417304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
86, 132
               

               
Conread position:
               
16-464
               

               
Cow position:
               
chr7:25023377-25023843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 17
               

               
Conread position:
               
18-219
               

               
Cow position:
               
chr7:25496806-25496620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
18-246
               

               
Cow position:
               
chr7:50566122-50566351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
128, 64
               

               
Conread position:
               
18-261
               

               
Cow position:
               
chr7:17967044-17967270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
68, 110
               

               
Conread position:
               
18-261
               

               
Cow position:
               
chr7:20168629-20168402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
64, 129
               

               
Conread position:
               
18-261
               

               
Cow position:
               
chr7:34223773-34223532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
81, 131
               

               
Conread position:
               
18-315
               

               
Cow position:
               
chr7:6042052-6041755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
65, 53
               

               
Conread position:
               
18-461
               

               
Cow position:
               
chr7:40952782-40953204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 9
               

               
Conread position:
               
19-151
               

               
Cow position:
               
chr7:56886431-56886562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
19-186
               

               
Cow position:
               
chr7:60732557-60732721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
21, 131
               

               
Conread position:
               
19-208
               

               
Cow position:
               
chr7:35245512-35245699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
67, 16
               

               
Conread position:
               
19-215
               

               
Cow position:
               
chr7:5199470-5199660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
77, 128
               

               
Conread position:
               
19-216
               

               
Cow position:
               
chr7:32946146-32945963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
19-229
               

               
Cow position:
               
chr7:23636784-23636584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
19-233
               

               
Cow position:
               
chr7:9136916-9136706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
64, 131
               

               
Conread position:
               
19-235
               

               
Cow position:
               
chr7:5212398-5212608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
157, 69
               

               
Conread position:
               
19-235
               

               
Cow position:
               
chr7:14174345-14174544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
19-235
               

               
Cow position:
               
chr7:53097669-53097463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
64, 130
               

               
Conread position:
               
19-235
               

               
Cow position:
               
chr7:58862803-58863018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
73, 131
               

               
Conread position:
               
19-245
               

               
Cow position:
               
chr7:21166164-21166387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
84, 137
               

               
Conread position:
               
19-249
               

               
Cow position:
               
chr7:9781646-9781871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
160, 77
               

               
Conread position:
               
19-252
               

               
Cow position:
               
chr7:10227-10000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
19-254
               

               
Cow position:
               
chr7:46105804-46106033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
26, 129
               

               
Conread position:
               
19-254
               

               
Cow position:
               
chr7:62193645-62193418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
19-255
               

               
Cow position:
               
chr7:11958358-11958577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
19-259
               

               
Cow position:
               
chr7:14005959-14005721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
18, 131
               

               
Conread position:
               
19-260
               

               
Cow position:
               
chr7:3773188-3773421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 24
               

               
Conread position:
               
19-260
               

               
Cow position:
               
chr7:30816211-30816437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
73, 18
               

               
Conread position:
               
19-260
               

               
Cow position:
               
chr7:36278377-36278144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
39, 110
               

               
Conread position:
               
19-260
               

               
Cow position:
               
chr7:50066038-50066263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
63, 94
               

               
Conread position:
               
19-260
               

               
Cow position:
               
chr7:55688116-55688348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
18, 92
               

               
Conread position:
               
19-261
               

               
Cow position:
               
chr7:20487-20250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
65, 130
               

               
Conread position:
               
19-261
               

               
Cow position:
               
chr7:11011604-11011844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
67, 94
               

               
Conread position:
               
19-261
               

               
Cow position:
               
chr7:26737268-26737491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
210, 63
               

               
Conread position:
               
19-261
               

               
Cow position:
               
chr7:40336118-40335887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
63, 49
               

               
Conread position:
               
19-261
               

               
Cow position:
               
chr7:54513327-54513574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
47, 196
               

               
Conread position:
               
19-262
               

               
Cow position:
               
chr7:52784724-52784956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
51, 19
               

               
Conread position:
               
19-270
               

               
Cow position:
               
chr7:14482144-14481896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
108, 58
               

               
Conread position:
               
19-278
               

               
Cow position:
               
chr7:7506053-7506307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
61, 130
               

               
Conread position:
               
19-288
               

               
Cow position:
               
chr7:3256267-3256544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
86, 106
               

               
Conread position:
               
19-375
               

               
Cow position:
               
chr7:44049292-44049630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
223, 128
               

               
Conread position:
               
19-386
               

               
Cow position:
               
chr7:61790274-61790646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
71, 102
               

               
Conread position:
               
19-387
               

               
Cow position:
               
chr7:15755368-15755714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
73, 95
               

               
Conread position:
               
19-387
               

               
Cow position:
               
chr7:63112697-63113052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
199, 63
               

               
Conread position:
               
19-398
               

               
Cow position:
               
chr7:40067739-40067374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 52
               

               
Conread position:
               
19-400
               

               
Cow position:
               
chr7:37952257-37951880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
163, 67
               

               
Conread position:
               
19-410
               

               
Cow position:
               
chr7:63749398-63749769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 107
               

               
Conread position:
               
19-417
               

               
Cow position:
               
chr7:30307821-30307455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
65, 107
               

               
Conread position:
               
19-421
               

               
Cow position:
               
chr7:51910207-51909833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
63, 22
               

               
Conread position:
               
19-423
               

               
Cow position:
               
chr7:40263579-40263971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 19
               

               
Conread position:
               
19-424
               

               
Cow position:
               
chr7:56838428-56838826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 63
               

               
Conread position:
               
19-425
               

               
Cow position:
               
chr7:10512632-10513015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 103
               

               
Conread position:
               
19-433
               

               
Cow position:
               
chr7:40189633-40189241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
82, 63
               

               
Conread position:
               
19-435
               

               
Cow position:
               
chr7:8877958-8877564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
71, 56
               

               
Conread position:
               
19-438
               

               
Cow position:
               
chr7:47513606-47514005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 77
               

               
Conread position:
               
19-453
               

               
Cow position:
               
chr7:37569127-37568697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
65, 137
               

               
Conread position:
               
19-454
               

               
Cow position:
               
chr7:32284000-32283584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
64, 83
               

               
Conread position:
               
19-454
               

               
Cow position:
               
chr7:47547487-47547063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 128
               

               
Conread position:
               
19-457
               

               
Cow position:
               
chr7:43711297-43710884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
64, 129
               

               
Conread position:
               
19-459
               

               
Cow position:
               
chr7:35274999-35275405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 130
               

               
Conread position:
               
19-461
               

               
Cow position:
               
chr7:17816827-17816422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
19-461
               

               
Cow position:
               
chr7:27387897-27388317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
73, 53
               

               
Conread position:
               
19-461
               

               
Cow position:
               
chr7:38082234-38081821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 63
               

               
Conread position:
               
19-461
               

               
Cow position:
               
chr7:39930367-39929941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
273, 66
               

               
Conread position:
               
19-461
               

               
Cow position:
               
chr7:45956007-45955569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
48, 82
               

               
Conread position:
               
19-461
               

               
Cow position:
               
chr7:52382900-52383325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 32
               

               
Conread position:
               
19-462
               

               
Cow position:
               
chr7:18544303-18544715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
19-462
               

               
Cow position:
               
chr7:22624024-22624436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
159, 128
               

               
Conread position:
               
19-462
               

               
Cow position:
               
chr7:52718557-52718979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
304, 87
               

               
Conread position:
               
19-462
               

               
Cow position:
               
chr7:57258945-57259369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 133
               

               
Conread position:
               
19-464
               

               
Cow position:
               
chr7:4452684-4452260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 82
               

               
Conread position:
               
19-464
               

               
Cow position:
               
chr7:14541988-14542393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 56
               

               
Conread position:
               
19-464
               

               
Cow position:
               
chr7:14632443-14632035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
19-464
               

               
Cow position:
               
chr7:23936189-23935744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 46
               

               
Conread position:
               
19-464
               

               
Cow position:
               
chr7:28584325-28583907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 76
               

               
Conread position:
               
19-464
               

               
Cow position:
               
chr7:30276813-30276391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 78
               

               
Conread position:
               
19-464
               

               
Cow position:
               
chr7:37361958-37361550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
295, 57
               

               
Conread position:
               
19-464
               

               
Cow position:
               
chr7:38060348-38060796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
82, 128
               

               
Conread position:
               
19-464
               

               
Cow position:
               
chr7:45927087-45927492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
82, 38
               

               
Conread position:
               
19-464
               

               
Cow position:
               
chr7:50095468-50095012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 129
               

               
Conread position:
               
19-464
               

               
Cow position:
               
chr7:60483347-60483765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
62, 70
               

               
Conread position:
               
19-464
               

               
Cow position:
               
chr7:61817859-61818277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 21
               

               
Conread position:
               
20-258
               

               
Cow position:
               
chr7:31497800-31497570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
66, 87
               

               
Conread position:
               
20-461
               

               
Cow position:
               
chr7:58301862-58302284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 68
               

               
Conread position:
               
21-219
               

               
Cow position:
               
chr7:48020495-48020306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
21-225
               

               
Cow position:
               
chr7:58923474-58923276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
155, 65
               

               
Conread position:
               
21-234
               

               
Cow position:
               
chr7:52776680-52776884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
164, 64
               

               
Conread position:
               
21-259
               

               
Cow position:
               
chr7:9800427-9800205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
21-260
               

               
Cow position:
               
chr7:4840889-4840657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
21-260
               

               
Cow position:
               
chr7:41315357-41315589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
65, 122
               

               
Conread position:
               
21-260
               

               
Cow position:
               
chr7:53763510-53763736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
21-261
               

               
Cow position:
               
chr7:147490-147259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
64, 30
               

               
Conread position:
               
21-261
               

               
Cow position:
               
chr7:8977748-8977974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
21-261
               

               
Cow position:
               
chr7:40894618-40894369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
32, 66
               

               
Conread position:
               
21-262
               

               
Cow position:
               
chr7:36569938-36569693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
51, 105
               

               
Conread position:
               
21-288
               

               
Cow position:
               
chr7:39988482-39988208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
21-409
               

               
Cow position:
               
chr7:23456745-23457103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
73, 126
               

               
Conread position:
               
21-460
               

               
Cow position:
               
chr7:6058204-6057791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 108
               

               
Conread position:
               
21-460
               

               
Cow position:
               
chr7:19399604-19400009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
52, 7
               

               
Conread position:
               
21-462
               

               
Cow position:
               
chr7:23568660-23569080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 11
               

               
Conread position:
               
21-464
               

               
Cow position:
               
chr7:42894520-42894076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
209, 65
               

               
Conread position:
               
21-464
               

               
Cow position:
               
chr7:49106125-49106537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 16
               

               
Conread position:
               
22-244
               

               
Cow position:
               
chr7:40192823-40192600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
69, 44
               

               
Conread position:
               
22-259
               

               
Cow position:
               
chr7:27283753-27283529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
22-259
               

               
Cow position:
               
chr7:43882156-43881928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
155, 74
               

               
Conread position:
               
22-261
               

               
Cow position:
               
chr7:20219765-20219991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
22-261
               

               
Cow position:
               
chr7:20537442-20537210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
60, 129
               

               
Conread position:
               
22-261
               

               
Cow position:
               
chr7:40008904-40008666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
60, 132
               

               
Conread position:
               
22-261
               

               
Cow position:
               
chr7:47698088-47697872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
60, 122
               

               
Conread position:
               
22-261
               

               
Cow position:
               
chr7:64135392-64135616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
160, 71
               

               
Conread position:
               
22-374
               

               
Cow position:
               
chr7:8777283-8776930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
59, 68
               

               
Conread position:
               
22-427
               

               
Cow position:
               
chr7:41872025-41872390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
22-459
               

               
Cow position:
               
chr7:34554341-34553912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 105
               

               
Conread position:
               
22-460
               

               
Cow position:
               
chr7:25195617-25195176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
241, 60
               

               
Conread position:
               
22-462
               

               
Cow position:
               
chr7:64228817-64229240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
49, 75
               

               
Conread position:
               
22-464
               

               
Cow position:
               
chr7:58170814-58170398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
307, 64
               

               
Conread position:
               
23-261
               

               
Cow position:
               
chr7:36714553-36714786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
23, 95
               

               
Conread position:
               
23-462
               

               
Cow position:
               
chr7:22357408-22357828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 77
               

               
Conread position:
               
23-462
               

               
Cow position:
               
chr7:66894465-66894880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 74
               

               
Conread position:
               
24-384
               

               
Cow position:
               
chr7:600410-600060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
7, 76
               

               
Conread position:
               
24-461
               

               
Cow position:
               
chr7:40567141-40566738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 96
               

               
Conread position:
               
25-413
               

               
Cow position:
               
chr7:32819891-32819521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 123
               

               
Conread position:
               
28-186
               

               
Cow position:
               
chr7:60870017-60869866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
28-223
               

               
Cow position:
               
chr7:23251493-23251681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
28-234
               

               
Cow position:
               
chr7:18188156-18188350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
59, 18
               

               
Conread position:
               
28-239
               

               
Cow position:
               
chr7:47172637-47172839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
54, 39
               

               
Conread position:
               
28-257
               

               
Cow position:
               
chr7:12755082-12755296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
54, 60
               

               
Conread position:
               
28-258
               

               
Cow position:
               
chr7:14536208-14536432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
66, 121
               

               
Conread position:
               
28-258
               

               
Cow position:
               
chr7:30155882-30156107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
66, 121
               

               
Conread position:
               
28-365
               

               
Cow position:
               
chr7:48721830-48722148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
58, 121
               

               
Conread position:
               
28-443
               

               
Cow position:
               
chr7:40758163-40758566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
55, 44
               

               
Conread position:
               
28-444
               

               
Cow position:
               
chr7:62516078-62515661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
56, 122
               

               
Conread position:
               
28-453
               

               
Cow position:
               
chr7:32710908-32711311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 54
               

               
Conread position:
               
28-454
               

               
Cow position:
               
chr7:25867427-25867873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
60, 89
               

               
Conread position:
               
28-460
               

               
Cow position:
               
chr7:51780790-51780376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
69, 58
               

               
Conread position:
               
28-461
               

               
Cow position:
               
chr7:18858409-18857980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
235, 36
               

               
Conread position:
               
28-461
               

               
Cow position:
               
chr7:34422197-34422645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 120
               

               
Conread position:
               
28-461
               

               
Cow position:
               
chr7:44596629-44597034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
73, 49
               

               
Conread position:
               
29-262
               

               
Cow position:
               
chr7:65122407-65122190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
150, 56
               

               
Conread position:
               
29-413
               

               
Cow position:
               
chr7:62733255-62732896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
71, 53
               

               
Conread position:
               
29-461
               

               
Cow position:
               
chr7:34979448-34979030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 56
               

               
Conread position:
               
29-464
               

               
Cow position:
               
chr7:43484467-43484904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 140
               

               
Conread position:
               
31-239
               

               
Cow position:
               
chr7:44094868-44095077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
41, 122
               

               
Conread position:
               
34-464
               

               
Cow position:
               
chr7:46148922-46148536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
52, 109
               

               
Conread position:
               
36-239
               

               
Cow position:
               
chr7:7553197-7553396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
44, 110
               

               
Conread position:
               
36-260
               

               
Cow position:
               
chr7:11715776-11715553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
43, 120
               

               
Conread position:
               
36-461
               

               
Cow position:
               
chr7:12212538-12212954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
52, 46
               

               
Conread position:
               
36-461
               

               
Cow position:
               
chr7:21008879-21009296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
58, 29
               

               
Conread position:
               
37-452
               

               
Cow position:
               
chr7:46116591-46116981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
133, 65
               

               
Conread position:
               
38-261
               

               
Cow position:
               
chr7:32372920-32372707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
63, 110
               

               
Conread position:
               
38-261
               

               
Cow position:
               
chr7:61765377-61765162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
56, 112
               

               
Conread position:
               
38-454
               

               
Cow position:
               
chr7:19948592-19948976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
54, 34
               

               
Conread position:
               
38-464
               

               
Cow position:
               
chr7:15608465-15608053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 44
               

               
Conread position:
               
38-464
               

               
Cow position:
               
chr7:26771930-26771528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 113
               

               
Conread position:
               
38-464
               

               
Cow position:
               
chr7:34412214-34412623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
138, 54
               

               
Conread position:
               
39-235
               

               
Cow position:
               
chr7:30931915-30932108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
49, 41
               

               
Conread position:
               
39-430
               

               
Cow position:
               
chr7:51072302-51071932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
138, 108
               

               
Conread position:
               
39-464
               

               
Cow position:
               
chr7:62553491-62553081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 22
               

               
Conread position:
               
40-260
               

               
Cow position:
               
chr7:3283421-3283209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
60, 40
               

               
Conread position:
               
40-260
               

               
Cow position:
               
chr7:3311901-3311689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
46, 40
               

               
Conread position:
               
40-260
               

               
Cow position:
               
chr7:43103383-43103606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
104, 176
               

               
Conread position:
               
41-261
               

               
Cow position:
               
chr7:64102354-64102561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
88, 47
               

               
Conread position:
               
41-464
               

               
Cow position:
               
chr7:42431885-42431483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
141, 47
               

               
Conread position:
               
42-447
               

               
Cow position:
               
chr7:53382259-53381873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
45, 106
               

               
Conread position:
               
42-464
               

               
Cow position:
               
chr7:24718476-24718915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
135, 33
               

               
Conread position:
               
43-238
               

               
Cow position:
               
chr7:12201872-12202057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
136, 31
               

               
Conread position:
               
43-260
               

               
Cow position:
               
chr7:7142004-7142217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
45, 58
               

               
Conread position:
               
43-261
               

               
Cow position:
               
chr7:5914252-5914051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
46-261
               

               
Cow position:
               
chr7:39528940-39529152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
46-442
               

               
Cow position:
               
chr7:13928101-13928490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
48, 75
               

               
Conread position:
               
50-288
               

               
Cow position:
               
chr7:53772285-53772515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
175, 36
               

               
Conread position:
               
52-259
               

               
Cow position:
               
chr7:37394355-37394167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
52-406
               

               
Cow position:
               
chr7:23679546-23679876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
52-461
               

               
Cow position:
               
chr7:35652027-35652415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
49, 97
               

               
Conread position:
               
54-453
               

               
Cow position:
               
chr7:61823808-61824184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 97
               

               
Conread position:
               
54-459
               

               
Cow position:
               
chr7:39402002-39401621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
125, 30
               

               
Conread position:
               
56-261
               

               
Cow position:
               
chr7:47936875-47937074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
126, 32
               

               
Conread position:
               
56-422
               

               
Cow position:
               
chr7:67839384-67839035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
39, 11
               

               
Conread position:
               
56-464
               

               
Cow position:
               
chr7:56886743-56887113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
218, 36
               

               
Conread position:
               
57-463
               

               
Cow position:
               
chr7:58362992-58362591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 9
               

               
Conread position:
               
61-238
               

               
Cow position:
               
chr7:66748487-66748657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
22, 37
               

               
Conread position:
               
63-463
               

               
Cow position:
               
chr7:15570079-15569706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 27
               

               
Conread position:
               
72-264
               

               
Cow position:
               
chr7:6820924-6820733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
133, 10
               

               
Conread position:
               
73-462
               

               
Cow position:
               
chr7:23619064-23619424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 20
               

               
Conread position:
               
75-442
               

               
Cow position:
               
chr7:68868135-68867789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
26, 74
               

               
Conread position:
               
75-459
               

               
Cow position:
               
chr7:40213378-40213002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
161, 23
               

               
Conread position:
               
76-461
               

               
Cow position:
               
chr7:26012447-26012082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
8, 56
               

               
Conread position:
               
76-464
               

               
Cow position:
               
chr7:34716267-34715896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 9
               

               
Conread position:
               
81-261
               

               
Cow position:
               
chr7:59645844-59646013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
82-248
               

               
Cow position:
               
chr7:3322817-3322655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
56, 69
               

               
Conread position:
               
83-464
               

               
Cow position:
               
chr7:58959817-58959457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
12, 25
               

               
Conread position:
               
86-461
               

               
Cow position:
               
chr7:12658981-12659336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 44
               

               
Conread position:
               
89-462
               

               
Cow position:
               
chr7:29010387-29010764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
173, 41
               

               
Conread position:
               
92-260
               

               
Cow position:
               
chr7:6800542-6800706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
97-283
               

               
Cow position:
               
chr7:27359474-27359648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
97-464
               

               
Cow position:
               
chr7:61129223-61128877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
103-460
               

               
Cow position:
               
chr7:26838652-26838316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
73, 48
               

               
Conread position:
               
106-260
               

               
Cow position:
               
chr7:10448788-10448935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
106-459
               

               
Cow position:
               
chr7:53741903-53742233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
75, 26
               

               
Conread position:
               
106-460
               

               
Cow position:
               
chr7:9080371-9080037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
110-460
               

               
Cow position:
               
chr7:66909471-66909144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
71, 17
               

               
Conread position:
               
139-464
               

               
Cow position:
               
chr7:53785993-53786324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
149, 70
               

               
Conread position:
               
148-403
               

               
Cow position:
               
chr7:40276420-40276669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
113, 7
               

               
Conread position:
               
151-260
               

               
Cow position:
               
chr7:7857247-7857355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
151-406
               

               
Cow position:
               
chr7:46928942-46928674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
111, 57
               

               
Conread position:
               
154-462
               

               
Cow position:
               
chr7:59667997-59667699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 58
               

               
Conread position:
               
157-261
               

               
Cow position:
               
chr7:27072931-27073030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
162-460
               

               
Cow position:
               
chr7:49793700-49793985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
19, 50
               

               
Conread position:
               
177-461
               

               
Cow position:
               
chr7:39551005-39551269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
177-461
               

               
Cow position:
               
chr7:40772707-40772423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
17, 33
               

               
Conread position:
               
178-432
               

               
Cow position:
               
chr7:10445410-10445663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
85, 33
               

               
Conread position:
               
204-462
               

               
Cow position:
               
chr7:43393630-43393877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
5, 60
               

               
Conread position:
               
210-457
               

               
Cow position:
               
chr7:53358826-53359076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
64, 53
               

               
Conread position:
               
210-458
               

               
Cow position:
               
chr7:27395261-27395027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
211-464
               

               
Cow position:
               
chr7:19414572-19414814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
72, 49
               

               
Conread position:
               
211-464
               

               
Cow position:
               
chr7:30114833-30115068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
209, 49
               
Show alignments to all cow chromosomes.