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Cow genome map

           
Conread name:
           
rsug23_g4.y1
        

               
Conread position:
               
1-260
               

               
Cow position:
               
chr9:31292665-31292910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr9:32710903-32711155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
15, 93
               

               
Conread position:
               
5-261
               

               
Cow position:
               
chr9:33038483-33038235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 39
               

               
Conread position:
               
5-461
               

               
Cow position:
               
chr9:5500835-5501257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
16, 31
               

               
Conread position:
               
7-410
               

               
Cow position:
               
chr9:38792996-38793378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
14, 72
               

               
Conread position:
               
8-141
               

               
Cow position:
               
chr9:23955999-23955870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
13, 78
               

               
Conread position:
               
8-145
               

               
Cow position:
               
chr9:33584704-33584565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
13, 52
               

               
Conread position:
               
8-147
               

               
Cow position:
               
chr9:21080542-21080682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
8-178
               

               
Cow position:
               
chr9:6596255-6596090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
13, 91
               

               
Conread position:
               
8-192
               

               
Cow position:
               
chr9:49293162-49292987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
12, 75
               

               
Conread position:
               
8-215
               

               
Cow position:
               
chr9:60027178-60027379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
13, 142
               

               
Conread position:
               
8-231
               

               
Cow position:
               
chr9:12910420-12910202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
13, 73
               

               
Conread position:
               
8-234
               

               
Cow position:
               
chr9:4341178-4340970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 75
               

               
Conread position:
               
8-235
               

               
Cow position:
               
chr9:34286780-34287001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 141
               

               
Conread position:
               
8-236
               

               
Cow position:
               
chr9:9654326-9654111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
90, 11
               

               
Conread position:
               
8-246
               

               
Cow position:
               
chr9:61302981-61303215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
17, 143
               

               
Conread position:
               
8-249
               

               
Cow position:
               
chr9:48628009-48628242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 126
               

               
Conread position:
               
8-258
               

               
Cow position:
               
chr9:17799607-17799850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
11, 142
               

               
Conread position:
               
8-260
               

               
Cow position:
               
chr9:4268001-4267758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
12, 91
               

               
Conread position:
               
8-260
               

               
Cow position:
               
chr9:8562803-8563063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
8-260
               

               
Cow position:
               
chr9:24887187-24887423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
13, 74
               

               
Conread position:
               
8-261
               

               
Cow position:
               
chr9:3186107-3186365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
13, 84
               

               
Conread position:
               
8-261
               

               
Cow position:
               
chr9:6338774-6339025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
11, 140
               

               
Conread position:
               
8-261
               

               
Cow position:
               
chr9:20091027-20091262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
13, 92
               

               
Conread position:
               
8-261
               

               
Cow position:
               
chr9:33119907-33119659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 140
               

               
Conread position:
               
8-261
               

               
Cow position:
               
chr9:34374943-34374706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
13, 64
               

               
Conread position:
               
8-261
               

               
Cow position:
               
chr9:36490918-36490672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
13, 146
               

               
Conread position:
               
8-261
               

               
Cow position:
               
chr9:45141619-45141382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
13, 86
               

               
Conread position:
               
8-261
               

               
Cow position:
               
chr9:53762675-53762924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 131
               

               
Conread position:
               
8-261
               

               
Cow position:
               
chr9:55084321-55084074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
14, 30
               

               
Conread position:
               
8-261
               

               
Cow position:
               
chr9:58972518-58972268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 121
               

               
Conread position:
               
8-288
               

               
Cow position:
               
chr9:44921412-44921140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
13, 141
               

               
Conread position:
               
8-385
               

               
Cow position:
               
chr9:26279188-26278824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
13, 68
               

               
Conread position:
               
8-388
               

               
Cow position:
               
chr9:13169682-13169336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
13, 82
               

               
Conread position:
               
8-388
               

               
Cow position:
               
chr9:26344987-26344614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
12, 59
               

               
Conread position:
               
8-389
               

               
Cow position:
               
chr9:32676658-32677020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
15, 82
               

               
Conread position:
               
8-400
               

               
Cow position:
               
chr9:5227191-5226816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
11, 30
               

               
Conread position:
               
8-425
               

               
Cow position:
               
chr9:22114654-22114267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
15, 31
               

               
Conread position:
               
8-460
               

               
Cow position:
               
chr9:54528495-54528924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 20
               

               
Conread position:
               
8-461
               

               
Cow position:
               
chr9:9406072-9405606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 118
               

               
Conread position:
               
8-461
               

               
Cow position:
               
chr9:50081059-50080636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
11, 67
               

               
Conread position:
               
8-462
               

               
Cow position:
               
chr9:1949898-1950329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 79
               

               
Conread position:
               
8-463
               

               
Cow position:
               
chr9:23431165-23430737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 124
               

               
Conread position:
               
8-464
               

               
Cow position:
               
chr9:9552071-9552498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 140
               

               
Conread position:
               
8-464
               

               
Cow position:
               
chr9:20847910-20848350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 140
               

               
Conread position:
               
8-464
               

               
Cow position:
               
chr9:21460170-21459749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 11
               

               
Conread position:
               
8-464
               

               
Cow position:
               
chr9:22443646-22443201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
13, 81
               

               
Conread position:
               
8-464
               

               
Cow position:
               
chr9:24872817-24873253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
78, 15
               

               
Conread position:
               
8-464
               

               
Cow position:
               
chr9:28747539-28747112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 74
               

               
Conread position:
               
8-464
               

               
Cow position:
               
chr9:44832073-44831644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 74
               

               
Conread position:
               
8-464
               

               
Cow position:
               
chr9:46316801-46316375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
321, 72
               

               
Conread position:
               
9-260
               

               
Cow position:
               
chr9:767169-766928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
12, 63
               

               
Conread position:
               
10-428
               

               
Cow position:
               
chr9:5763647-5763253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
319, 18
               

               
Conread position:
               
10-464
               

               
Cow position:
               
chr9:6192476-6192051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 68
               

               
Conread position:
               
11-145
               

               
Cow position:
               
chr9:43875733-43875596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
10, 66
               

               
Conread position:
               
11-227
               

               
Cow position:
               
chr9:41728242-41728448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
10, 97
               

               
Conread position:
               
11-235
               

               
Cow position:
               
chr9:7634255-7634473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
8, 138
               

               
Conread position:
               
11-243
               

               
Cow position:
               
chr9:3738240-3738013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
10, 99
               

               
Conread position:
               
11-249
               

               
Cow position:
               
chr9:58614478-58614704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
170, 30
               

               
Conread position:
               
11-258
               

               
Cow position:
               
chr9:13670617-13670856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
12, 35
               

               
Conread position:
               
11-260
               

               
Cow position:
               
chr9:11319650-11319410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
10, 99
               

               
Conread position:
               
11-261
               

               
Cow position:
               
chr9:5441973-5442219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
8, 142
               

               
Conread position:
               
11-414
               

               
Cow position:
               
chr9:33218970-33218590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
11, 49
               

               
Conread position:
               
11-462
               

               
Cow position:
               
chr9:64050577-64050150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
10, 61
               

               
Conread position:
               
12-257
               

               
Cow position:
               
chr9:34742740-34742509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
7, 83
               

               
Conread position:
               
15-243
               

               
Cow position:
               
chr9:50543437-50543211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
67, 134
               

               
Conread position:
               
15-460
               

               
Cow position:
               
chr9:11313522-11313105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
6, 79
               

               
Conread position:
               
15-460
               

               
Cow position:
               
chr9:52407153-52407577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
89, 134
               

               
Conread position:
               
15-461
               

               
Cow position:
               
chr9:62656793-62657202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
324, 66
               

               
Conread position:
               
15-464
               

               
Cow position:
               
chr9:64091668-64092096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 134
               

               
Conread position:
               
16-257
               

               
Cow position:
               
chr9:9595960-9595735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
16-260
               

               
Cow position:
               
chr9:29108527-29108760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
84, 9
               

               
Conread position:
               
16-454
               

               
Cow position:
               
chr9:33681664-33682077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
55, 67
               

               
Conread position:
               
18-453
               

               
Cow position:
               
chr9:49072939-49073360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
163, 68
               

               
Conread position:
               
18-464
               

               
Cow position:
               
chr9:37069565-37069138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 56
               

               
Conread position:
               
19-137
               

               
Cow position:
               
chr9:28754810-28754929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
19-189
               

               
Cow position:
               
chr9:52267765-52267601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
67, 88
               

               
Conread position:
               
19-215
               

               
Cow position:
               
chr9:11168723-11168911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
64, 75
               

               
Conread position:
               
19-216
               

               
Cow position:
               
chr9:8901234-8901042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
68, 130
               

               
Conread position:
               
19-223
               

               
Cow position:
               
chr9:34689606-34689414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
67, 125
               

               
Conread position:
               
19-225
               

               
Cow position:
               
chr9:19555366-19555565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
67, 92
               

               
Conread position:
               
19-234
               

               
Cow position:
               
chr9:28354510-28354718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 113
               

               
Conread position:
               
19-234
               

               
Cow position:
               
chr9:40543332-40543122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
72, 67
               

               
Conread position:
               
19-244
               

               
Cow position:
               
chr9:19493473-19493253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
65, 130
               

               
Conread position:
               
19-249
               

               
Cow position:
               
chr9:11068478-11068255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
26, 18
               

               
Conread position:
               
19-259
               

               
Cow position:
               
chr9:1938123-1938347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
65, 110
               

               
Conread position:
               
19-260
               

               
Cow position:
               
chr9:5209573-5209806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
19-260
               

               
Cow position:
               
chr9:10144485-10144250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
31, 23
               

               
Conread position:
               
19-260
               

               
Cow position:
               
chr9:41283008-41283249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
126, 70
               

               
Conread position:
               
19-260
               

               
Cow position:
               
chr9:42062092-42062338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
33, 91
               

               
Conread position:
               
19-260
               

               
Cow position:
               
chr9:51620435-51620658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
19-260
               

               
Cow position:
               
chr9:52578545-52578311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
63, 128
               

               
Conread position:
               
19-260
               

               
Cow position:
               
chr9:55287899-55287672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
82, 56
               

               
Conread position:
               
19-260
               

               
Cow position:
               
chr9:63905614-63905382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
56, 63
               

               
Conread position:
               
19-261
               

               
Cow position:
               
chr9:5327251-5327477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
19-261
               

               
Cow position:
               
chr9:6225462-6225229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
160, 128
               

               
Conread position:
               
19-261
               

               
Cow position:
               
chr9:6839986-6840234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
74, 136
               

               
Conread position:
               
19-261
               

               
Cow position:
               
chr9:32307238-32307013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
19-261
               

               
Cow position:
               
chr9:33597979-33598204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
157, 55
               

               
Conread position:
               
19-261
               

               
Cow position:
               
chr9:35849897-35850122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
19-261
               

               
Cow position:
               
chr9:51204720-51204948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
63, 83
               

               
Conread position:
               
19-261
               

               
Cow position:
               
chr9:55795748-55795981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
63, 132
               

               
Conread position:
               
19-261
               

               
Cow position:
               
chr9:64155858-64155633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
110, 66
               

               
Conread position:
               
19-264
               

               
Cow position:
               
chr9:55256559-55256321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
19-288
               

               
Cow position:
               
chr9:41679740-41680006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
216, 65
               

               
Conread position:
               
19-297
               

               
Cow position:
               
chr9:34468585-34468313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
202, 65
               

               
Conread position:
               
19-301
               

               
Cow position:
               
chr9:17928750-17929034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
56, 83
               

               
Conread position:
               
19-308
               

               
Cow position:
               
chr9:1751331-1751603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
255, 61
               

               
Conread position:
               
19-318
               

               
Cow position:
               
chr9:36827128-36827430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
211, 58
               

               
Conread position:
               
19-394
               

               
Cow position:
               
chr9:9199789-9199442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
18, 61
               

               
Conread position:
               
19-408
               

               
Cow position:
               
chr9:19714073-19714427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
158, 88
               

               
Conread position:
               
19-409
               

               
Cow position:
               
chr9:38343880-38344253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 131
               

               
Conread position:
               
19-412
               

               
Cow position:
               
chr9:21030301-21030678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
157, 80
               

               
Conread position:
               
19-417
               

               
Cow position:
               
chr9:5433625-5433997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
63, 132
               

               
Conread position:
               
19-420
               

               
Cow position:
               
chr9:62357538-62357159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
66, 46
               

               
Conread position:
               
19-423
               

               
Cow position:
               
chr9:50606955-50606581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
310, 65
               

               
Conread position:
               
19-434
               

               
Cow position:
               
chr9:56453331-56453734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
54, 18
               

               
Conread position:
               
19-441
               

               
Cow position:
               
chr9:13205579-13205183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
65, 126
               

               
Conread position:
               
19-441
               

               
Cow position:
               
chr9:34958063-34957662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 116
               

               
Conread position:
               
19-453
               

               
Cow position:
               
chr9:44467346-44466947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
310, 32
               

               
Conread position:
               
19-454
               

               
Cow position:
               
chr9:1952277-1951867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
82, 56
               

               
Conread position:
               
19-454
               

               
Cow position:
               
chr9:3931953-3932368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 53
               

               
Conread position:
               
19-454
               

               
Cow position:
               
chr9:18380855-18381263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
63, 46
               

               
Conread position:
               
19-455
               

               
Cow position:
               
chr9:8723787-8724222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
63, 13
               

               
Conread position:
               
19-456
               

               
Cow position:
               
chr9:28983175-28983593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
76, 67
               

               
Conread position:
               
19-458
               

               
Cow position:
               
chr9:15805930-15805518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
80, 117
               

               
Conread position:
               
19-458
               

               
Cow position:
               
chr9:45756356-45756759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
70, 124
               

               
Conread position:
               
19-460
               

               
Cow position:
               
chr9:9723886-9723475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
19-461
               

               
Cow position:
               
chr9:3387682-3388101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 128
               

               
Conread position:
               
19-461
               

               
Cow position:
               
chr9:17310572-17310130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
73, 55
               

               
Conread position:
               
19-461
               

               
Cow position:
               
chr9:29006550-29006977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 131
               

               
Conread position:
               
19-461
               

               
Cow position:
               
chr9:29185144-29184727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
51, 131
               

               
Conread position:
               
19-462
               

               
Cow position:
               
chr9:1520744-1520318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 78
               

               
Conread position:
               
19-462
               

               
Cow position:
               
chr9:8534697-8534275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 69
               

               
Conread position:
               
19-462
               

               
Cow position:
               
chr9:8869150-8868725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 55
               

               
Conread position:
               
19-462
               

               
Cow position:
               
chr9:30402432-30402006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
70, 53
               

               
Conread position:
               
19-464
               

               
Cow position:
               
chr9:5509717-5510137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
19-464
               

               
Cow position:
               
chr9:9443608-9443180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 25
               

               
Conread position:
               
19-464
               

               
Cow position:
               
chr9:9516773-9516358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 100
               

               
Conread position:
               
19-464
               

               
Cow position:
               
chr9:17740949-17740535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 46
               

               
Conread position:
               
19-464
               

               
Cow position:
               
chr9:24997526-24997091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 55
               

               
Conread position:
               
19-464
               

               
Cow position:
               
chr9:28726731-28726318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 131
               

               
Conread position:
               
19-464
               

               
Cow position:
               
chr9:31079089-31078671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 70
               

               
Conread position:
               
19-464
               

               
Cow position:
               
chr9:35375418-35375834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
65, 129
               

               
Conread position:
               
19-464
               

               
Cow position:
               
chr9:42445990-42445562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 130
               

               
Conread position:
               
19-464
               

               
Cow position:
               
chr9:45285542-45285132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
63, 126
               

               
Conread position:
               
20-234
               

               
Cow position:
               
chr9:59013348-59013134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
14, 21
               

               
Conread position:
               
20-393
               

               
Cow position:
               
chr9:6934080-6933730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
165, 66
               

               
Conread position:
               
21-202
               

               
Cow position:
               
chr9:5263493-5263669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
71, 128
               

               
Conread position:
               
21-249
               

               
Cow position:
               
chr9:43207379-43207162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
21-261
               

               
Cow position:
               
chr9:5836149-5836385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
185, 53
               

               
Conread position:
               
21-261
               

               
Cow position:
               
chr9:27279304-27279541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
161, 61
               

               
Conread position:
               
21-384
               

               
Cow position:
               
chr9:54924613-54924964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
74, 128
               

               
Conread position:
               
21-458
               

               
Cow position:
               
chr9:48564082-48564501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
160, 22
               

               
Conread position:
               
21-461
               

               
Cow position:
               
chr9:52725222-52724796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
67, 123
               

               
Conread position:
               
21-464
               

               
Cow position:
               
chr9:16300574-16300155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
58, 92
               

               
Conread position:
               
21-464
               

               
Cow position:
               
chr9:22361005-22361426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 129
               

               
Conread position:
               
21-464
               

               
Cow position:
               
chr9:61997603-61997192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 85
               

               
Conread position:
               
22-235
               

               
Cow position:
               
chr9:823956-824161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
64, 91
               

               
Conread position:
               
22-239
               

               
Cow position:
               
chr9:47500216-47500002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
64, 126
               

               
Conread position:
               
22-245
               

               
Cow position:
               
chr9:32817146-32816927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
62, 50
               

               
Conread position:
               
22-260
               

               
Cow position:
               
chr9:64105895-64106129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
52, 134
               

               
Conread position:
               
22-261
               

               
Cow position:
               
chr9:17872114-17871884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
60, 127
               

               
Conread position:
               
22-311
               

               
Cow position:
               
chr9:18217103-18216828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
22-421
               

               
Cow position:
               
chr9:26403781-26404159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
160, 60
               

               
Conread position:
               
22-424
               

               
Cow position:
               
chr9:9403178-9402788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
215, 58
               

               
Conread position:
               
22-462
               

               
Cow position:
               
chr9:8937148-8937560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
159, 52
               

               
Conread position:
               
22-464
               

               
Cow position:
               
chr9:23388683-23388266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 93
               

               
Conread position:
               
24-262
               

               
Cow position:
               
chr9:8288613-8288841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
61, 128
               

               
Conread position:
               
24-454
               

               
Cow position:
               
chr9:8950902-8951318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
76, 48
               

               
Conread position:
               
24-462
               

               
Cow position:
               
chr9:41789282-41789707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
61, 74
               

               
Conread position:
               
25-460
               

               
Cow position:
               
chr9:8338026-8338459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 75
               

               
Conread position:
               
25-462
               

               
Cow position:
               
chr9:8998348-8998765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 132
               

               
Conread position:
               
26-258
               

               
Cow position:
               
chr9:40105467-40105697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
119, 70
               

               
Conread position:
               
26-281
               

               
Cow position:
               
chr9:30195214-30195463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
230, 112
               

               
Conread position:
               
26-453
               

               
Cow position:
               
chr9:54611236-54610830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
54, 43
               

               
Conread position:
               
27-261
               

               
Cow position:
               
chr9:54998028-54997800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
98, 70
               

               
Conread position:
               
28-460
               

               
Cow position:
               
chr9:34310026-34310443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
64, 39
               

               
Conread position:
               
36-205
               

               
Cow position:
               
chr9:4324147-4323986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
36-461
               

               
Cow position:
               
chr9:30189105-30189522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
25, 54
               

               
Conread position:
               
38-223
               

               
Cow position:
               
chr9:1712464-1712289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
52, 37
               

               
Conread position:
               
38-245
               

               
Cow position:
               
chr9:58669389-58669588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
38-261
               

               
Cow position:
               
chr9:4861396-4861615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
47, 112
               

               
Conread position:
               
38-261
               

               
Cow position:
               
chr9:29091804-29092027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
63, 118
               

               
Conread position:
               
38-261
               

               
Cow position:
               
chr9:40603957-40604173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
44, 55
               

               
Conread position:
               
38-375
               

               
Cow position:
               
chr9:29035024-29034704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
50, 112
               

               
Conread position:
               
38-462
               

               
Cow position:
               
chr9:39681351-39681769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 48
               

               
Conread position:
               
38-464
               

               
Cow position:
               
chr9:56773093-56773498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 50
               

               
Conread position:
               
39-258
               

               
Cow position:
               
chr9:32371744-32371541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
39-261
               

               
Cow position:
               
chr9:58979410-58979624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
39-261
               

               
Cow position:
               
chr9:64517088-64516872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
12, 50
               

               
Conread position:
               
40-464
               

               
Cow position:
               
chr9:20579589-20579182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
46, 22
               

               
Conread position:
               
41-249
               

               
Cow position:
               
chr9:34902093-34901901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
41-261
               

               
Cow position:
               
chr9:16745687-16745901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
55, 104
               

               
Conread position:
               
41-261
               

               
Cow position:
               
chr9:58734383-58734598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
60, 41
               

               
Conread position:
               
41-401
               

               
Cow position:
               
chr9:19541920-19542258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
140, 62
               

               
Conread position:
               
41-461
               

               
Cow position:
               
chr9:34093426-34093001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
29, 13
               

               
Conread position:
               
42-288
               

               
Cow position:
               
chr9:11299674-11299425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
195, 38
               

               
Conread position:
               
43-225
               

               
Cow position:
               
chr9:14358180-14358353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
133, 32
               

               
Conread position:
               
43-261
               

               
Cow position:
               
chr9:50667438-50667647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
39, 47
               

               
Conread position:
               
44-464
               

               
Cow position:
               
chr9:61022629-61023021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
46-429
               

               
Cow position:
               
chr9:5622018-5621653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
36, 103
               

               
Conread position:
               
48-449
               

               
Cow position:
               
chr9:32812371-32812743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 38
               

               
Conread position:
               
49-464
               

               
Cow position:
               
chr9:20811042-20810654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 52
               

               
Conread position:
               
52-261
               

               
Cow position:
               
chr9:1997163-1997361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
34, 88
               

               
Conread position:
               
52-262
               

               
Cow position:
               
chr9:5238422-5238620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
33, 91
               

               
Conread position:
               
52-438
               

               
Cow position:
               
chr9:18002928-18002564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
35, 96
               

               
Conread position:
               
52-462
               

               
Cow position:
               
chr9:30138160-30138554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
222, 22
               

               
Conread position:
               
52-464
               

               
Cow position:
               
chr9:28773147-28773530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
53-464
               

               
Cow position:
               
chr9:4928653-4929032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
29, 7
               

               
Conread position:
               
54-223
               

               
Cow position:
               
chr9:34666448-34666607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
54-225
               

               
Cow position:
               
chr9:30123947-30124111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
28, 65
               

               
Conread position:
               
54-261
               

               
Cow position:
               
chr9:41652814-41653012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
55-414
               

               
Cow position:
               
chr9:58439753-58439423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
39, 20
               

               
Conread position:
               
56-226
               

               
Cow position:
               
chr9:60037680-60037845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
29, 93
               

               
Conread position:
               
56-261
               

               
Cow position:
               
chr9:49403789-49403975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
56-455
               

               
Cow position:
               
chr9:9093192-9093570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
125, 30
               

               
Conread position:
               
64-260
               

               
Cow position:
               
chr9:8546362-8546540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
66-259
               

               
Cow position:
               
chr9:3782398-3782584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
41, 7
               

               
Conread position:
               
68-260
               

               
Cow position:
               
chr9:18073073-18072895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 63
               

               
Conread position:
               
74-460
               

               
Cow position:
               
chr9:17579350-17579724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
33, 53
               

               
Conread position:
               
75-434
               

               
Cow position:
               
chr9:40542168-40542531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
104, 35
               

               
Conread position:
               
76-254
               

               
Cow position:
               
chr9:51011497-51011324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
76-260
               

               
Cow position:
               
chr9:10118615-10118443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
76-461
               

               
Cow position:
               
chr9:30020017-30020407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
72, 99
               

               
Conread position:
               
78-393
               

               
Cow position:
               
chr9:37528502-37528798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
10, 71
               

               
Conread position:
               
82-450
               

               
Cow position:
               
chr9:21674937-21674579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
192, 75
               

               
Conread position:
               
82-461
               

               
Cow position:
               
chr9:14184718-14185096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
10, 88
               

               
Conread position:
               
83-238
               

               
Cow position:
               
chr9:45171112-45170964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 69
               

               
Conread position:
               
84-464
               

               
Cow position:
               
chr9:53608338-53607981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
98-257
               

               
Cow position:
               
chr9:41995780-41995933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
82, 50
               

               
Conread position:
               
105-417
               

               
Cow position:
               
chr9:22440432-22440138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
130, 42
               

               
Conread position:
               
106-460
               

               
Cow position:
               
chr9:27289233-27289562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
75, 40
               

               
Conread position:
               
110-464
               

               
Cow position:
               
chr9:62400043-62400368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
117-454
               

               
Cow position:
               
chr9:41958710-41958382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
157, 30
               

               
Conread position:
               
118-461
               

               
Cow position:
               
chr9:35100958-35101283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
156, 30
               

               
Conread position:
               
151-260
               

               
Cow position:
               
chr9:58131610-58131502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
152-260
               

               
Cow position:
               
chr9:20465598-20465491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
152-464
               

               
Cow position:
               
chr9:29338919-29338624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
84, 56
               

               
Conread position:
               
155-260
               

               
Cow position:
               
chr9:33584333-33584230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
157-460
               

               
Cow position:
               
chr9:37157584-37157874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
24, 53
               

               
Conread position:
               
157-460
               

               
Cow position:
               
chr9:40327430-40327141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
24, 53
               

               
Conread position:
               
162-406
               

               
Cow position:
               
chr9:26124689-26124450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
101, 12
               

               
Conread position:
               
177-288
               

               
Cow position:
               
chr9:49651969-49652081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
84, 32
               

               
Conread position:
               
185-460
               

               
Cow position:
               
chr9:8154327-8154588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
191-434
               

               
Cow position:
               
chr9:50659289-50659043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
21, 73
               

               
Conread position:
               
200-464
               

               
Cow position:
               
chr9:49292936-49292677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
76, 9
               

               
Conread position:
               
211-462
               

               
Cow position:
               
chr9:27463325-27463071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
49, 112
               

               
Conread position:
               
260-442
               

               
Cow position:
               
chr9:8570970-8571158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
29, 22
               
Show alignments to all cow chromosomes.