Cow genome map

Conread name: rsug23_m4.y1

Conread position: 60-478
Cow position: chr12:42685277-42684858 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 197
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 228, 148

Conread position: 93-485
Cow position: chr12:35368348-35368742 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 266
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 194, 33

Conread position: 100-450
Cow position: chr12:29780191-29779854 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 236
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 143, 31

Conread position: 110-447
Cow position: chr12:17000978-17001315 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 208

Conread position: 112-291
Cow position: chr12:6687592-6687762 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 112-494
Cow position: chr12:37770597-37770973 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 103

Conread position: 113-474
Cow position: chr12:30662227-30661865 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 80

Conread position: 113-479
Cow position: chr12:17774527-17774880 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 250
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 21, 73

Conread position: 113-479
Cow position: chr12:31959616-31959967 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 254
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 15, 103

Conread position: 114-311
Cow position: chr12:9465733-9465540 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 72, 12

Conread position: 114-450
Cow position: chr12:8943496-8943164 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 234
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 72, 43

Conread position: 114-496
Cow position: chr12:30805582-30805965 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 72

Conread position: 115-477
Cow position: chr12:32169261-32169626 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 202

Conread position: 115-486
Cow position: chr12:9143118-9143485 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 150

Conread position: 116-291
Cow position: chr12:3880530-3880352 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 71, 0

Conread position: 116-302
Cow position: chr12:1885366-1885174 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 116-309
Cow position: chr12:9414042-9413862 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 175, 70

Conread position: 116-309
Cow position: chr12:12017602-12017798 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 76, 0

Conread position: 116-311
Cow position: chr12:18076260-18076456 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 139
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 125, 70

Conread position: 116-314
Cow position: chr12:32391571-32391774 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 160
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 102, 70

Conread position: 116-323
Cow position: chr12:3212051-3212261 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 61, 69

Conread position: 116-331
Cow position: chr12:40270360-40270149 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 118, 54

Conread position: 116-383
Cow position: chr12:3568672-3568934 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 175
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 170, 67

Conread position: 116-388
Cow position: chr12:42625645-42625369 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 183
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 70, 214

Conread position: 116-405
Cow position: chr12:41336733-41336443 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 189
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 122, 71

Conread position: 116-410
Cow position: chr12:12178647-12178943 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 207
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 70, 94

Conread position: 116-418
Cow position: chr12:6210431-6210130 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 211
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 175, 76

Conread position: 116-418
Cow position: chr12:9482573-9482277 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 209
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 58, 71

Conread position: 116-418
Cow position: chr12:15149994-15150296 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 194
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 111, 71

Conread position: 116-418
Cow position: chr12:15358054-15358368 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 213
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 70, 0

Conread position: 116-421
Cow position: chr12:41091255-41091564 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 218
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 70, 167

Conread position: 116-438
Cow position: chr12:9914515-9914837 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 226
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 35, 72

Conread position: 116-444
Cow position: chr12:30170393-30170723 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 99

Conread position: 116-450
Cow position: chr12:5905783-5906116 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 69

Conread position: 116-450
Cow position: chr12:8869157-8868822 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 239
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 54, 88

Conread position: 116-450
Cow position: chr12:9229756-9229440 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 221
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 71, 0

Conread position: 116-450
Cow position: chr12:18020579-18020917 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 121

Conread position: 116-450
Cow position: chr12:25805384-25805072 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 116-450
Cow position: chr12:28582766-28582450 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 229
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 176, 70

Conread position: 116-450
Cow position: chr12:30605430-30605106 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 143

Conread position: 116-465
Cow position: chr12:34148625-34148286 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 89

Conread position: 116-466
Cow position: chr12:41083793-41084132 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 14

Conread position: 116-473
Cow position: chr12:44518009-44517652 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 242
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 120, 33

Conread position: 116-479
Cow position: chr12:6411002-6410642 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 76

Conread position: 116-482
Cow position: chr12:44622085-44622436 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 65

Conread position: 116-482
Cow position: chr12:45820631-45820271 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 40

Conread position: 116-484
Cow position: chr12:6241035-6241410 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 133

Conread position: 116-490
Cow position: chr12:11835968-11836337 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 249
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 190, 65

Conread position: 116-494
Cow position: chr12:18518397-18518778 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 65

Conread position: 116-494
Cow position: chr12:30745439-30745822 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 155

Conread position: 116-496
Cow position: chr12:15089218-15089624 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 182

Conread position: 116-496
Cow position: chr12:15429874-15429486 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 117-275
Cow position: chr12:19420205-19420045 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 125, 38

Conread position: 117-304
Cow position: chr12:4134391-4134586 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 35, 0

Conread position: 117-304
Cow position: chr12:30728512-30728320 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 69, 149

Conread position: 117-309
Cow position: chr12:20326498-20326694 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 69, 14

Conread position: 117-310
Cow position: chr12:25455841-25456038 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 69, 161

Conread position: 117-366
Cow position: chr12:22047196-22047446 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 192
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 69, 141

Conread position: 117-375
Cow position: chr12:29411762-29411504 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 104

Conread position: 117-383
Cow position: chr12:26317186-26317458 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 204
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 25, 62

Conread position: 117-388
Cow position: chr12:42604396-42604121 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 178
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 213

Conread position: 117-405
Cow position: chr12:6164302-6164007 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 117-411
Cow position: chr12:18421200-18420901 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 117-413
Cow position: chr12:28011172-28010886 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 205
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 70, 0

Conread position: 117-418
Cow position: chr12:21419550-21419243 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 196
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 215

Conread position: 117-422
Cow position: chr12:19508845-19508527 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 225
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 69, 208

Conread position: 117-429
Cow position: chr12:3076896-3076588 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 221
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 70, 200

Conread position: 117-450
Cow position: chr12:6489250-6488933 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 228
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 194, 54

Conread position: 117-450
Cow position: chr12:18577576-18577900 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 69

Conread position: 117-450
Cow position: chr12:31429834-31429511 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 225
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 170, 64

Conread position: 117-450
Cow position: chr12:44905363-44905687 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 221
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 39, 160

Conread position: 117-451
Cow position: chr12:19869198-19869522 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 228
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 160, 69

Conread position: 117-454
Cow position: chr12:33457875-33458211 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 230
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 168, 26

Conread position: 117-454
Cow position: chr12:47803881-47804220 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 235
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 20, 71

Conread position: 117-466
Cow position: chr12:30437977-30438316 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 238
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 334, 64

Conread position: 117-471
Cow position: chr12:39465305-39465660 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 163

Conread position: 117-475
Cow position: chr12:17881599-17881949 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 249
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 146, 28

Conread position: 117-476
Cow position: chr12:39486156-39486503 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 158

Conread position: 117-477
Cow position: chr12:6720047-6720417 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 20

Conread position: 117-477
Cow position: chr12:27803323-27802963 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 247
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 69, 158

Conread position: 117-478
Cow position: chr12:2812950-2813314 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 28

Conread position: 117-478
Cow position: chr12:41473822-41474180 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 243
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 214, 69

Conread position: 117-482
Cow position: chr12:30590503-30590859 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 248
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 69, 126

Conread position: 117-486
Cow position: chr12:5714355-5714724 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 70

Conread position: 117-488
Cow position: chr12:22516010-22515634 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 240
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 68, 28

Conread position: 117-491
Cow position: chr12:17031348-17031715 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 58

Conread position: 117-492
Cow position: chr12:22881778-22882158 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 254
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 75, 30

Conread position: 117-494
Cow position: chr12:33323772-33323388 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 256
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 69, 203

Conread position: 117-494
Cow position: chr12:40910564-40910179 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 195

Conread position: 117-494
Cow position: chr12:41159323-41159696 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 269
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 69, 40

Conread position: 117-494
Cow position: chr12:42602513-42602131 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 251
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 69, 100

Conread position: 117-494
Cow position: chr12:42879433-42879805 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 64

Conread position: 117-496
Cow position: chr12:17079985-17080374 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 60

Conread position: 117-496
Cow position: chr12:22285374-22285013 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 266
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 171, 69

Conread position: 118-275
Cow position: chr12:4593823-4593988 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 118-321
Cow position: chr12:31841165-31841374 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 69, 200

Conread position: 118-372
Cow position: chr12:3510292-3510542 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 189
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 68, 12

Conread position: 118-433
Cow position: chr12:16605918-16605630 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 223
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 68, 0

Conread position: 118-449
Cow position: chr12:5632146-5631823 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 227
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 198, 68

Conread position: 118-450
Cow position: chr12:37993998-37993672 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 231
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 69, 143

Conread position: 118-478
Cow position: chr12:15530791-15531142 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 249
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 167, 65

Conread position: 118-488
Cow position: chr12:4866542-4866918 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 257
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 129, 69

Conread position: 118-492
Cow position: chr12:20777203-20776825 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 125

Conread position: 118-494
Cow position: chr12:7884927-7884574 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 255
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 333, 28

Conread position: 118-494
Cow position: chr12:11056604-11056977 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 146

Conread position: 118-494
Cow position: chr12:20479586-20479231 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 245
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 333, 69

Conread position: 118-494
Cow position: chr12:25561098-25561472 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 144

Conread position: 118-494
Cow position: chr12:42181413-42181022 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 110

Conread position: 118-496
Cow position: chr12:18388554-18388178 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 69

Conread position: 119-331
Cow position: chr12:38010319-38010117 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 168, 12

Conread position: 119-383
Cow position: chr12:8710560-8710814 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 67

Conread position: 119-488
Cow position: chr12:48415784-48415415 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 250
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 151, 68

Conread position: 120-450
Cow position: chr12:25177864-25177538 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 236
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 35, 202

Conread position: 120-472
Cow position: chr12:19691508-19691151 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 278

Conread position: 120-478
Cow position: chr12:31228304-31228663 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 252
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 177, 67

Conread position: 120-494
Cow position: chr12:27563651-27563270 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 247
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 66, 37

Conread position: 122-450
Cow position: chr12:18766247-18765913 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 228
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 64, 8

Conread position: 123-326
Cow position: chr12:24107804-24107606 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 54, 8

Conread position: 123-494
Cow position: chr12:5635715-5635346 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 86

Conread position: 127-478
Cow position: chr12:7000855-7000514 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 238
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 113, 59

Conread position: 127-482
Cow position: chr12:32714779-32715135 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 71

Conread position: 130-321
Cow position: chr12:29162071-29161884 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 111, 56

Conread position: 130-365
Cow position: chr12:4182956-4182716 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 55, 190

Conread position: 130-450
Cow position: chr12:5940083-5940401 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 223
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 46, 63

Conread position: 131-492
Cow position: chr12:15122077-15122429 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 55

Conread position: 136-358
Cow position: chr12:13112285-13112511 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 50, 76

Conread position: 136-450
Cow position: chr12:24024045-24023742 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 210
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 78, 21

Conread position: 140-365
Cow position: chr12:25820685-25820455 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 22, 71

Conread position: 144-473
Cow position: chr12:24211170-24211488 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 226
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 43, 99

Conread position: 145-450
Cow position: chr12:33129018-33129314 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 215
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 7, 22

Conread position: 147-450
Cow position: chr12:34161174-34161473 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 198
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 26, 47

Conread position: 147-478
Cow position: chr12:29770816-29770490 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 40

Conread position: 149-454
Cow position: chr12:1889822-1889514 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 196
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 6, 44

Conread position: 149-484
Cow position: chr12:28471398-28471741 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 208
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 137, 39

Conread position: 151-450
Cow position: chr12:35377960-35378261 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 209
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 35, 100

Conread position: 151-479
Cow position: chr12:27037687-27037358 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 11

Conread position: 152-383
Cow position: chr12:27062160-27061927 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 158
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 34, 71

Conread position: 152-388
Cow position: chr12:43791809-43791571 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 158
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 176

Conread position: 152-418
Cow position: chr12:6275342-6275072 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 181
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 34, 167

Conread position: 152-418
Cow position: chr12:8123172-8123437 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 177
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 58, 35

Conread position: 152-418
Cow position: chr12:26232886-26232620 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 177
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 91, 71

Conread position: 152-418
Cow position: chr12:41737564-41737833 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 181
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 22, 35

Conread position: 153-423
Cow position: chr12:13156436-13156701 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 191
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 8, 164

Conread position: 158-477
Cow position: chr12:24662883-24663203 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 44

Conread position: 159-389
Cow position: chr12:38454687-38454908 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 181
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 132, 22

Conread position: 159-416
Cow position: chr12:731166-730910 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 183
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 127, 28

Conread position: 159-418
Cow position: chr12:12579256-12579005 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 176
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 75, 28

Conread position: 163-473
Cow position: chr12:25452669-25452365 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 206
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 134, 13

Conread position: 165-365
Cow position: chr12:18021368-18021567 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 21, 45

Conread position: 168-375
Cow position: chr12:4116271-4116474 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 91, 24

Conread position: 170-450
Cow position: chr12:30210258-30210543 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 194
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 16, 135

Conread position: 175-494
Cow position: chr12:33851140-33851462 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 221
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 11, 218

Conread position: 184-416
Cow position: chr12:18550675-18550907 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 156
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 126, 101

Conread position: 184-494
Cow position: chr12:26218031-26217720 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 205
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 14, 42

Conread position: 184-494
Cow position: chr12:33975997-33976309 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 207
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 96, 9

Conread position: 191-482
Cow position: chr12:4768726-4769015 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 188
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 87

Conread position: 196-494
Cow position: chr12:7299664-7299355 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 202
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 6, 136

Conread position: 201-488
Cow position: chr12:11587577-11587875 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 193
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 130

Conread position: 203-473
Cow position: chr12:6485395-6485126 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 197
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 108, 67

Conread position: 209-494
Cow position: chr12:12637370-12637079 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 191
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 24, 258

Conread position: 211-487
Cow position: chr12:4719765-4720047 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 183
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 220

Conread position: 213-433
Cow position: chr12:23855657-23855879 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 153
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 29, 183

Conread position: 213-494
Cow position: chr12:38774418-38774139 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 185
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 32, 91

Conread position: 215-482
Cow position: chr12:15703673-15703406 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 185
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 101, 71

Conread position: 217-459
Cow position: chr12:19507458-19507706 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 178
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 74, 31

Conread position: 223-450
Cow position: chr12:42784139-42784372 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 159
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 230-494
Cow position: chr12:37170104-37169840 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 88

Conread position: 234-492
Cow position: chr12:24032344-24032595 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 175
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 52, 0

Conread position: 235-493
Cow position: chr12:46120986-46120730 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 180
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 51, 89

Conread position: 238-494
Cow position: chr12:17269646-17269907 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 184
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 52, 77

Conread position: 245-450
Cow position: chr12:24116510-24116303 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 13, 101

Conread position: 245-492
Cow position: chr12:9767020-9766774 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 171
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 86, 31

Conread position: 245-494
Cow position: chr12:19258133-19258385 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 174
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 42, 82

Conread position: 250-492
Cow position: chr12:16670124-16670373 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 267-474
Cow position: chr12:19261074-19261282 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 49, 29

Conread position: 279-494
Cow position: chr12:7902913-7902699 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 93, 33

Conread position: 280-494
Cow position: chr12:18583104-18582890 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 8, 53

Conread position: 286-492
Cow position: chr12:3371647-3371443 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 35, 100

Conread position: 290-493
Cow position: chr12:37514382-37514180 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 137
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 39, 163

Conread position: 296-494
Cow position: chr12:33948808-33949007 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 140
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 30, 18

Conread position: 300-494
Cow position: chr12:5554425-5554231 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 14, 31

Conread position: 303-488
Cow position: chr12:45092361-45092543 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 304-494
Cow position: chr12:36261603-36261800 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 142, 0

Conread position: 312-496
Cow position: chr12:12232805-12232989 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 99, 79

Conread position: 313-450
Cow position: chr12:15641182-15641047 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 68, 13

Conread position: 323-483
Cow position: chr12:15260696-15260855 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 97, 103

Conread position: 345-494
Cow position: chr12:14986704-14986853 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 106, 128

Show alignments to all cow chromosomes.