• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
rsug23_m4.y1
        

               
Conread position:
               
85-449
               

               
Cow position:
               
chr20:15235542-15235892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
102, 41
               

               
Conread position:
               
90-478
               

               
Cow position:
               
chr20:21714534-21714928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
153, 91
               

               
Conread position:
               
91-473
               

               
Cow position:
               
chr20:36207584-36207975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 151
               

               
Conread position:
               
96-331
               

               
Cow position:
               
chr20:17733991-17733749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
90, 119
               

               
Conread position:
               
98-494
               

               
Cow position:
               
chr20:23846882-23846478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 12
               

               
Conread position:
               
99-304
               

               
Cow position:
               
chr20:35760458-35760666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
10, 91
               

               
Conread position:
               
103-450
               

               
Cow position:
               
chr20:32084289-32083941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 27
               

               
Conread position:
               
103-494
               

               
Cow position:
               
chr20:27408084-27407707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 217
               

               
Conread position:
               
104-446
               

               
Cow position:
               
chr20:11542487-11542150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 18
               

               
Conread position:
               
106-454
               

               
Cow position:
               
chr20:34107913-34108250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
109-483
               

               
Cow position:
               
chr20:34098158-34097776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
168, 77
               

               
Conread position:
               
110-486
               

               
Cow position:
               
chr20:21928706-21929081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 27
               

               
Conread position:
               
111-363
               

               
Cow position:
               
chr20:5025500-5025249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
127, 73
               

               
Conread position:
               
112-475
               

               
Cow position:
               
chr20:6602844-6603207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 75
               

               
Conread position:
               
112-478
               

               
Cow position:
               
chr20:21372119-21372480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
74, 136
               

               
Conread position:
               
113-494
               

               
Cow position:
               
chr20:13829068-13829450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
73, 97
               

               
Conread position:
               
115-273
               

               
Cow position:
               
chr20:16291278-16291437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
115-275
               

               
Cow position:
               
chr20:4781368-4781531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
115-290
               

               
Cow position:
               
chr20:38415165-38414989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
115-418
               

               
Cow position:
               
chr20:22313351-22313051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 44
               

               
Conread position:
               
115-430
               

               
Cow position:
               
chr20:3607148-3606840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 67
               

               
Conread position:
               
115-482
               

               
Cow position:
               
chr20:10200148-10200518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
30, 82
               

               
Conread position:
               
115-483
               

               
Cow position:
               
chr20:5998858-5998485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 72
               

               
Conread position:
               
115-486
               

               
Cow position:
               
chr20:22235121-22235486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 72
               

               
Conread position:
               
115-490
               

               
Cow position:
               
chr20:32847159-32847525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 77
               

               
Conread position:
               
115-494
               

               
Cow position:
               
chr20:14879593-14879973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 130
               

               
Conread position:
               
116-276
               

               
Cow position:
               
chr20:24902664-24902496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
30, 133
               

               
Conread position:
               
116-291
               

               
Cow position:
               
chr20:12334189-12334356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
124, 68
               

               
Conread position:
               
116-314
               

               
Cow position:
               
chr20:11923433-11923236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
8, 71
               

               
Conread position:
               
116-320
               

               
Cow position:
               
chr20:9379216-9379422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
126, 70
               

               
Conread position:
               
116-336
               

               
Cow position:
               
chr20:10235659-10235884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
70, 187
               

               
Conread position:
               
116-348
               

               
Cow position:
               
chr20:26469258-26469023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
95, 71
               

               
Conread position:
               
116-358
               

               
Cow position:
               
chr20:3781619-3781374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
171, 70
               

               
Conread position:
               
116-358
               

               
Cow position:
               
chr20:15068951-15069189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
70, 123
               

               
Conread position:
               
116-366
               

               
Cow position:
               
chr20:20312930-20312690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
171, 65
               

               
Conread position:
               
116-369
               

               
Cow position:
               
chr20:30817344-30817598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
171, 71
               

               
Conread position:
               
116-392
               

               
Cow position:
               
chr20:7132155-7132435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
70, 213
               

               
Conread position:
               
116-404
               

               
Cow position:
               
chr20:22704095-22704390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
116-412
               

               
Cow position:
               
chr20:40256777-40257073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
126, 55
               

               
Conread position:
               
116-415
               

               
Cow position:
               
chr20:6890512-6890820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
56, 219
               

               
Conread position:
               
116-418
               

               
Cow position:
               
chr20:20778746-20778448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
70, 195
               

               
Conread position:
               
116-421
               

               
Cow position:
               
chr20:28439887-28440197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
70, 182
               

               
Conread position:
               
116-421
               

               
Cow position:
               
chr20:34918086-34918383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
124, 70
               

               
Conread position:
               
116-421
               

               
Cow position:
               
chr20:39517818-39518119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
48, 43
               

               
Conread position:
               
116-429
               

               
Cow position:
               
chr20:4205770-4206092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
116-432
               

               
Cow position:
               
chr20:6423771-6424090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
81, 65
               

               
Conread position:
               
116-432
               

               
Cow position:
               
chr20:15549090-15548773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 65
               

               
Conread position:
               
116-433
               

               
Cow position:
               
chr20:4621532-4621230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
126, 71
               

               
Conread position:
               
116-450
               

               
Cow position:
               
chr20:18320988-18320653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 230
               

               
Conread position:
               
116-450
               

               
Cow position:
               
chr20:33144748-33144412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
118, 70
               

               
Conread position:
               
116-450
               

               
Cow position:
               
chr20:34597301-34596956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
49, 80
               

               
Conread position:
               
116-450
               

               
Cow position:
               
chr20:40423283-40422962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
121, 71
               

               
Conread position:
               
116-466
               

               
Cow position:
               
chr20:6096678-6096335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
175, 36
               

               
Conread position:
               
116-473
               

               
Cow position:
               
chr20:6258256-6257900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 14
               

               
Conread position:
               
116-477
               

               
Cow position:
               
chr20:14759857-14759498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
70, 108
               

               
Conread position:
               
116-478
               

               
Cow position:
               
chr20:7756822-7756456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 70
               

               
Conread position:
               
116-478
               

               
Cow position:
               
chr20:38768646-38768293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 71
               

               
Conread position:
               
116-479
               

               
Cow position:
               
chr20:5826744-5827113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 251
               

               
Conread position:
               
116-479
               

               
Cow position:
               
chr20:12420814-12420445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 85
               

               
Conread position:
               
116-482
               

               
Cow position:
               
chr20:19751116-19751483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
70, 99
               

               
Conread position:
               
116-482
               

               
Cow position:
               
chr20:38873205-38872826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
70, 110
               

               
Conread position:
               
116-483
               

               
Cow position:
               
chr20:29844862-29845227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 71
               

               
Conread position:
               
116-488
               

               
Cow position:
               
chr20:5702552-5702906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
335, 71
               

               
Conread position:
               
116-488
               

               
Cow position:
               
chr20:35364858-35365226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
172, 70
               

               
Conread position:
               
116-494
               

               
Cow position:
               
chr20:7426382-7426006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 90
               

               
Conread position:
               
116-494
               

               
Cow position:
               
chr20:14806693-14807070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 71
               

               
Conread position:
               
116-494
               

               
Cow position:
               
chr20:20203023-20203401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 69
               

               
Conread position:
               
116-496
               

               
Cow position:
               
chr20:25009836-25009444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 136
               

               
Conread position:
               
117-296
               

               
Cow position:
               
chr20:41977229-41977401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
117-311
               

               
Cow position:
               
chr20:18399568-18399767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
119, 68
               

               
Conread position:
               
117-320
               

               
Cow position:
               
chr20:14735484-14735688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
170, 75
               

               
Conread position:
               
117-335
               

               
Cow position:
               
chr20:19410561-19410339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
77, 112
               

               
Conread position:
               
117-367
               

               
Cow position:
               
chr20:22445827-22445589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
175, 70
               

               
Conread position:
               
117-412
               

               
Cow position:
               
chr20:23505636-23505931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 95
               

               
Conread position:
               
117-418
               

               
Cow position:
               
chr20:5950825-5950534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
117-418
               

               
Cow position:
               
chr20:6054705-6054400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
117, 64
               

               
Conread position:
               
117-418
               

               
Cow position:
               
chr20:7806754-7806460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
69, 198
               

               
Conread position:
               
117-418
               

               
Cow position:
               
chr20:8703099-8702808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
171, 52
               

               
Conread position:
               
117-418
               

               
Cow position:
               
chr20:11176439-11176138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
69, 135
               

               
Conread position:
               
117-418
               

               
Cow position:
               
chr20:24398824-24398537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
124, 70
               

               
Conread position:
               
117-418
               

               
Cow position:
               
chr20:31740408-31740110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
117-419
               

               
Cow position:
               
chr20:7659406-7659103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
170, 30
               

               
Conread position:
               
117-449
               

               
Cow position:
               
chr20:28296098-28296434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
115, 225
               

               
Conread position:
               
117-450
               

               
Cow position:
               
chr20:581113-580779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
168, 70
               

               
Conread position:
               
117-450
               

               
Cow position:
               
chr20:13269432-13269756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 14
               

               
Conread position:
               
117-450
               

               
Cow position:
               
chr20:20983815-20984133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
180, 64
               

               
Conread position:
               
117-450
               

               
Cow position:
               
chr20:33363328-33363659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 68
               

               
Conread position:
               
117-450
               

               
Cow position:
               
chr20:36779923-36779588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
70, 100
               

               
Conread position:
               
117-454
               

               
Cow position:
               
chr20:25686544-25686203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
69, 199
               

               
Conread position:
               
117-468
               

               
Cow position:
               
chr20:42469573-42469921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
117, 26
               

               
Conread position:
               
117-470
               

               
Cow position:
               
chr20:9536942-9537296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 69
               

               
Conread position:
               
117-475
               

               
Cow position:
               
chr20:23792411-23792770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 13
               

               
Conread position:
               
117-479
               

               
Cow position:
               
chr20:23871008-23870646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
69, 162
               

               
Conread position:
               
117-482
               

               
Cow position:
               
chr20:13752048-13752398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 70
               

               
Conread position:
               
117-486
               

               
Cow position:
               
chr20:33532119-33532477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
117, 54
               

               
Conread position:
               
117-490
               

               
Cow position:
               
chr20:19363554-19363191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 54
               

               
Conread position:
               
117-492
               

               
Cow position:
               
chr20:22064878-22065246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 81
               

               
Conread position:
               
117-494
               

               
Cow position:
               
chr20:6240721-6240333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 205
               

               
Conread position:
               
117-494
               

               
Cow position:
               
chr20:8556466-8556083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 229
               

               
Conread position:
               
117-494
               

               
Cow position:
               
chr20:11340997-11340616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
70, 205
               

               
Conread position:
               
117-494
               

               
Cow position:
               
chr20:12239872-12239499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 122
               

               
Conread position:
               
117-494
               

               
Cow position:
               
chr20:24069619-24069992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 20
               

               
Conread position:
               
117-494
               

               
Cow position:
               
chr20:28605013-28605393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 70
               

               
Conread position:
               
117-494
               

               
Cow position:
               
chr20:28982505-28982885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 273
               

               
Conread position:
               
117-494
               

               
Cow position:
               
chr20:39325193-39325581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
69, 141
               

               
Conread position:
               
117-494
               

               
Cow position:
               
chr20:39418086-39417715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
125, 64
               

               
Conread position:
               
117-495
               

               
Cow position:
               
chr20:35907239-35906865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
117, 69
               

               
Conread position:
               
118-311
               

               
Cow position:
               
chr20:32636756-32636565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
117, 70
               

               
Conread position:
               
118-323
               

               
Cow position:
               
chr20:10468880-10469083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
116, 34
               

               
Conread position:
               
118-410
               

               
Cow position:
               
chr20:39019504-39019797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
176, 69
               

               
Conread position:
               
118-421
               

               
Cow position:
               
chr20:35176961-35176665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
6, 35
               

               
Conread position:
               
118-429
               

               
Cow position:
               
chr20:14572547-14572243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 69
               

               
Conread position:
               
118-432
               

               
Cow position:
               
chr20:35797414-35797732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
68, 111
               

               
Conread position:
               
118-449
               

               
Cow position:
               
chr20:40127527-40127204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
116, 69
               

               
Conread position:
               
118-478
               

               
Cow position:
               
chr20:17845768-17846128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
68, 98
               

               
Conread position:
               
118-478
               

               
Cow position:
               
chr20:34776995-34777348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
118, 69
               

               
Conread position:
               
118-494
               

               
Cow position:
               
chr20:398485-398125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
118, 57
               

               
Conread position:
               
118-494
               

               
Cow position:
               
chr20:8578053-8578438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
118-494
               

               
Cow position:
               
chr20:10208611-10208994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 319
               

               
Conread position:
               
118-494
               

               
Cow position:
               
chr20:39398297-39398669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 56
               

               
Conread position:
               
118-494
               

               
Cow position:
               
chr20:40177059-40177431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
167, 69
               

               
Conread position:
               
119-371
               

               
Cow position:
               
chr20:18618448-18618698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
150, 68
               

               
Conread position:
               
119-450
               

               
Cow position:
               
chr20:11741494-11741164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
68, 199
               

               
Conread position:
               
119-470
               

               
Cow position:
               
chr20:9412303-9412652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 11
               

               
Conread position:
               
119-487
               

               
Cow position:
               
chr20:38817820-38818177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
169, 67
               

               
Conread position:
               
119-494
               

               
Cow position:
               
chr20:12582137-12581769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 62
               

               
Conread position:
               
120-309
               

               
Cow position:
               
chr20:37200164-37200360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
66, 55
               

               
Conread position:
               
120-439
               

               
Cow position:
               
chr20:34001585-34001260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
92, 67
               

               
Conread position:
               
120-450
               

               
Cow position:
               
chr20:11550177-11550507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 68
               

               
Conread position:
               
120-450
               

               
Cow position:
               
chr20:26996341-26996670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 191
               

               
Conread position:
               
120-494
               

               
Cow position:
               
chr20:9433409-9433769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
114, 54
               

               
Conread position:
               
123-323
               

               
Cow position:
               
chr20:24391794-24391997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
63, 122
               

               
Conread position:
               
123-351
               

               
Cow position:
               
chr20:23936604-23936362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
123-438
               

               
Cow position:
               
chr20:19459833-19459536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
177, 43
               

               
Conread position:
               
124-365
               

               
Cow position:
               
chr20:37272530-37272771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
6, 22
               

               
Conread position:
               
126-421
               

               
Cow position:
               
chr20:39415556-39415862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
15, 5
               

               
Conread position:
               
127-291
               

               
Cow position:
               
chr20:40185858-40185700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
115, 60
               

               
Conread position:
               
127-361
               

               
Cow position:
               
chr20:34364853-34365079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
202, 44
               

               
Conread position:
               
127-383
               

               
Cow position:
               
chr20:11864318-11864059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 70
               

               
Conread position:
               
127-439
               

               
Cow position:
               
chr20:3740183-3739873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
11, 60
               

               
Conread position:
               
127-477
               

               
Cow position:
               
chr20:38578939-38578593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 60
               

               
Conread position:
               
128-479
               

               
Cow position:
               
chr20:16935484-16935143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 166
               

               
Conread position:
               
130-494
               

               
Cow position:
               
chr20:39743135-39743492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
51, 122
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr20:41119739-41119893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
135-478
               

               
Cow position:
               
chr20:23065003-23064663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
163, 52
               

               
Conread position:
               
136-421
               

               
Cow position:
               
chr20:36010616-36010908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
50, 200
               

               
Conread position:
               
139-449
               

               
Cow position:
               
chr20:31080874-31081178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
47, 14
               

               
Conread position:
               
139-474
               

               
Cow position:
               
chr20:3321308-3320976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
159, 45
               

               
Conread position:
               
139-494
               

               
Cow position:
               
chr20:3254878-3255221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
28, 113
               

               
Conread position:
               
140-375
               

               
Cow position:
               
chr20:28831794-28832037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
141-450
               

               
Cow position:
               
chr20:7210867-7211175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
13, 174
               

               
Conread position:
               
141-450
               

               
Cow position:
               
chr20:7439017-7438710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
146, 25
               

               
Conread position:
               
142-449
               

               
Cow position:
               
chr20:5636313-5636621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
44, 176
               

               
Conread position:
               
146-289
               

               
Cow position:
               
chr20:9701738-9701597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
100, 22
               

               
Conread position:
               
149-311
               

               
Cow position:
               
chr20:31077389-31077558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
149-443
               

               
Cow position:
               
chr20:8307853-8308151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 249
               

               
Conread position:
               
149-474
               

               
Cow position:
               
chr20:15312499-15312837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
37, 290
               

               
Conread position:
               
151-450
               

               
Cow position:
               
chr20:20241942-20242225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
152-385
               

               
Cow position:
               
chr20:18837318-18837079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
152-388
               

               
Cow position:
               
chr20:14804104-14804340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
34, 154
               

               
Conread position:
               
152-418
               

               
Cow position:
               
chr20:14011813-14012078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
34, 126
               

               
Conread position:
               
153-477
               

               
Cow position:
               
chr20:15569106-15568778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
34, 156
               

               
Conread position:
               
155-295
               

               
Cow position:
               
chr20:9729932-9730070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
43, 6
               

               
Conread position:
               
156-298
               

               
Cow position:
               
chr20:14917147-14917292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
86, 30
               

               
Conread position:
               
157-488
               

               
Cow position:
               
chr20:13025760-13025434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
84, 17
               

               
Conread position:
               
159-454
               

               
Cow position:
               
chr20:1575949-1576242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
150, 28
               

               
Conread position:
               
160-450
               

               
Cow position:
               
chr20:28441177-28441468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 110
               

               
Conread position:
               
162-473
               

               
Cow position:
               
chr20:4334667-4334362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
277, 25
               

               
Conread position:
               
164-388
               

               
Cow position:
               
chr20:14837284-14837510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
7, 164
               

               
Conread position:
               
170-418
               

               
Cow position:
               
chr20:20708063-20708311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
11, 17
               

               
Conread position:
               
171-429
               

               
Cow position:
               
chr20:40446191-40446449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
21, 123
               

               
Conread position:
               
172-494
               

               
Cow position:
               
chr20:8546931-8547251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 13
               

               
Conread position:
               
173-450
               

               
Cow position:
               
chr20:22484724-22485000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
69, 11
               

               
Conread position:
               
175-494
               

               
Cow position:
               
chr20:2298911-2298608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
107, 12
               

               
Conread position:
               
176-440
               

               
Cow position:
               
chr20:8098148-8098417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
65, 142
               

               
Conread position:
               
179-451
               

               
Cow position:
               
chr20:4892952-4892680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
58, 7
               

               
Conread position:
               
185-450
               

               
Cow position:
               
chr20:22978197-22978468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
75, 13
               

               
Conread position:
               
185-488
               

               
Cow position:
               
chr20:25162253-25161945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
187-447
               

               
Cow position:
               
chr20:28955826-28955563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
19, 146
               

               
Conread position:
               
189-454
               

               
Cow position:
               
chr20:24833973-24834234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
96, 165
               

               
Conread position:
               
191-482
               

               
Cow position:
               
chr20:2819424-2819719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
52, 85
               

               
Conread position:
               
191-494
               

               
Cow position:
               
chr20:32463640-32463338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
97, 183
               

               
Conread position:
               
195-478
               

               
Cow position:
               
chr20:20099708-20099429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
47, 15
               

               
Conread position:
               
197-434
               

               
Cow position:
               
chr20:24000911-24000672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
45, 11
               

               
Conread position:
               
198-450
               

               
Cow position:
               
chr20:39267071-39266817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
72, 146
               

               
Conread position:
               
201-494
               

               
Cow position:
               
chr20:10188166-10188462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
86, 39
               

               
Conread position:
               
212-448
               

               
Cow position:
               
chr20:35710074-35710315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
213-420
               

               
Cow position:
               
chr20:23103123-23103334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
213-494
               

               
Cow position:
               
chr20:7738323-7738047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
75, 98
               

               
Conread position:
               
213-494
               

               
Cow position:
               
chr20:18379285-18379564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
103, 62
               

               
Conread position:
               
214-364
               

               
Cow position:
               
chr20:5939039-5938891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 96
               

               
Conread position:
               
214-450
               

               
Cow position:
               
chr20:22265341-22265111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
66, 59
               

               
Conread position:
               
214-481
               

               
Cow position:
               
chr20:23286419-23286161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
235, 62
               

               
Conread position:
               
221-482
               

               
Cow position:
               
chr20:41883647-41883900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
74, 21
               

               
Conread position:
               
222-450
               

               
Cow position:
               
chr20:26077745-26077527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
222-475
               

               
Cow position:
               
chr20:32866275-32866027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
66, 41
               

               
Conread position:
               
222-477
               

               
Cow position:
               
chr20:38868557-38868801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
65, 10
               

               
Conread position:
               
234-407
               

               
Cow position:
               
chr20:21204284-21204456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
58, 73
               

               
Conread position:
               
244-471
               

               
Cow position:
               
chr20:7624312-7624083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
195, 69
               

               
Conread position:
               
245-475
               

               
Cow position:
               
chr20:23506534-23506304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
42, 71
               

               
Conread position:
               
245-492
               

               
Cow position:
               
chr20:38089847-38090101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
35, 30
               

               
Conread position:
               
246-494
               

               
Cow position:
               
chr20:17100297-17100545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
42, 84
               

               
Conread position:
               
252-482
               

               
Cow position:
               
chr20:38514724-38514954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
36, 58
               

               
Conread position:
               
264-450
               

               
Cow position:
               
chr20:4787059-4786877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
23, 117
               

               
Conread position:
               
270-478
               

               
Cow position:
               
chr20:22030280-22030489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 163
               

               
Conread position:
               
274-476
               

               
Cow position:
               
chr20:21815528-21815731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
177, 6
               

               
Conread position:
               
286-450
               

               
Cow position:
               
chr20:6358593-6358761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
300-445
               

               
Cow position:
               
chr20:1009714-1009570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
309-482
               

               
Cow position:
               
chr20:15529860-15530032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
17, 93
               

               
Conread position:
               
317-494
               

               
Cow position:
               
chr20:3148692-3148870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
328-486
               

               
Cow position:
               
chr20:24097020-24097178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.