Cow genome map

Conread name: rsug23_m4.y1

Conread position: 85-450
Cow position: chr27:20549494-20549853 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 251
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 203, 17

Conread position: 92-478
Cow position: chr27:16589498-16589875 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 36

Conread position: 97-338
Cow position: chr27:20118613-20118376 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 164
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 96

Conread position: 98-450
Cow position: chr27:26151229-26150876 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 12

Conread position: 102-419
Cow position: chr27:435446-435123 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 229
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 30, 53

Conread position: 107-478
Cow position: chr27:30988996-30988625 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 259
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 109, 19

Conread position: 109-478
Cow position: chr27:19661142-19660760 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 254
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 19, 63

Conread position: 111-283
Cow position: chr27:30989645-30989819 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 77

Conread position: 113-309
Cow position: chr27:28038143-28038343 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 74, 17

Conread position: 114-417
Cow position: chr27:10307101-10307406 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 212
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 80, 70

Conread position: 114-494
Cow position: chr27:15454405-15454024 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 16

Conread position: 115-285
Cow position: chr27:29400011-29399839 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 140
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 50, 15

Conread position: 115-372
Cow position: chr27:14902455-14902717 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 188
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 71, 111

Conread position: 115-421
Cow position: chr27:22426638-22426945 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 215
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 127, 15

Conread position: 115-477
Cow position: chr27:16705440-16705079 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 244
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 127, 65

Conread position: 115-483
Cow position: chr27:22454587-22454952 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 246
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 34, 72

Conread position: 115-494
Cow position: chr27:18739581-18739186 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 273
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 119, 71

Conread position: 116-289
Cow position: chr27:28018529-28018353 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 71, 0

Conread position: 116-295
Cow position: chr27:13317762-13317945 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 70, 0

Conread position: 116-303
Cow position: chr27:22179605-22179788 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 150
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 120, 70

Conread position: 116-324
Cow position: chr27:25676418-25676211 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 76, 14

Conread position: 116-331
Cow position: chr27:27003089-27003298 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 167, 67

Conread position: 116-337
Cow position: chr27:31147481-31147698 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 61, 67

Conread position: 116-348
Cow position: chr27:9090609-9090840 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 178
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 70, 107

Conread position: 116-369
Cow position: chr27:30362435-30362185 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 92, 31

Conread position: 116-383
Cow position: chr27:31372787-31373058 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 195
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 132, 70

Conread position: 116-399
Cow position: chr27:2682951-2683236 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 194
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 121, 71

Conread position: 116-418
Cow position: chr27:8062166-8062460 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 200
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 71, 13

Conread position: 116-418
Cow position: chr27:15204039-15204339 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 196
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 70, 107

Conread position: 116-418
Cow position: chr27:15925527-15925236 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 202
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 118, 70

Conread position: 116-418
Cow position: chr27:24227601-24227909 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 217
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 126, 71

Conread position: 116-427
Cow position: chr27:10582555-10582254 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 198
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 134, 71

Conread position: 116-436
Cow position: chr27:26319230-26318906 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 207
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 70, 198

Conread position: 116-445
Cow position: chr27:4835415-4835743 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 231
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 70, 149

Conread position: 116-450
Cow position: chr27:20553909-20553590 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 116-450
Cow position: chr27:23483415-23483085 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 68

Conread position: 116-450
Cow position: chr27:23882182-23882509 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 233
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 70, 36

Conread position: 116-452
Cow position: chr27:4805716-4806044 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 236
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 52, 31

Conread position: 116-459
Cow position: chr27:8629682-8630021 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 29

Conread position: 116-476
Cow position: chr27:4673213-4672843 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 86

Conread position: 116-477
Cow position: chr27:6541817-6541460 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 71

Conread position: 116-477
Cow position: chr27:30359587-30359235 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 245
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 195, 29

Conread position: 116-478
Cow position: chr27:12516391-12516021 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 253
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 56, 71

Conread position: 116-478
Cow position: chr27:20795976-20795620 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 59

Conread position: 116-483
Cow position: chr27:6550643-6550286 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 261
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 171, 76

Conread position: 116-486
Cow position: chr27:20828515-20828887 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 257
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 96, 47

Conread position: 116-488
Cow position: chr27:2957600-2957231 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 262
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 58, 166

Conread position: 116-492
Cow position: chr27:1768443-1768808 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 261
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 203, 39

Conread position: 116-494
Cow position: chr27:299191-299564 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 18

Conread position: 116-494
Cow position: chr27:19685522-19685900 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 71

Conread position: 116-494
Cow position: chr27:20354772-20354412 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 261
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 175, 65

Conread position: 116-494
Cow position: chr27:26239216-26238836 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 31

Conread position: 116-494
Cow position: chr27:27019909-27020288 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 266
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 76, 15

Conread position: 116-494
Cow position: chr27:27388836-27389215 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 270
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 172, 70

Conread position: 116-496
Cow position: chr27:7412575-7412204 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 166

Conread position: 116-496
Cow position: chr27:21668933-21669301 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 117-302
Cow position: chr27:15312393-15312206 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 120, 69

Conread position: 117-307
Cow position: chr27:22498745-22498557 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 30

Conread position: 117-311
Cow position: chr27:29251072-29250874 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 11, 0

Conread position: 117-319
Cow position: chr27:8291820-8292017 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 125, 68

Conread position: 117-332
Cow position: chr27:28921705-28921918 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 69, 98

Conread position: 117-335
Cow position: chr27:30744629-30744853 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 154
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 69, 161

Conread position: 117-353
Cow position: chr27:15858899-15859134 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 176
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 193, 68

Conread position: 117-367
Cow position: chr27:16871727-16871975 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 188
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 168, 11

Conread position: 117-372
Cow position: chr27:732762-732509 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 174
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 97, 14

Conread position: 117-378
Cow position: chr27:27259800-27259544 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 180
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 122, 72

Conread position: 117-388
Cow position: chr27:26787173-26787443 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 181
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 120, 64

Conread position: 117-409
Cow position: chr27:21350824-21351122 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 205
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 69, 285

Conread position: 117-410
Cow position: chr27:26864927-26865219 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 210

Conread position: 117-416
Cow position: chr27:27554495-27554788 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 197
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 45, 40

Conread position: 117-418
Cow position: chr27:3988802-3988496 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 196
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 9, 238

Conread position: 117-418
Cow position: chr27:30374379-30374678 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 201
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 69, 173

Conread position: 117-421
Cow position: chr27:6500256-6499948 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 220
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 69, 199

Conread position: 117-421
Cow position: chr27:11296449-11296157 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 210
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 69, 116

Conread position: 117-421
Cow position: chr27:21408361-21408676 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 211
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 69, 0

Conread position: 117-422
Cow position: chr27:12429600-12429293 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 226
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 64, 183

Conread position: 117-422
Cow position: chr27:15272097-15271806 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 207
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 117, 64

Conread position: 117-428
Cow position: chr27:1353775-1353463 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 218
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 103, 13

Conread position: 117-432
Cow position: chr27:26807372-26807689 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 204
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 168, 71

Conread position: 117-438
Cow position: chr27:26427937-26428262 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 233
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 75, 195

Conread position: 117-439
Cow position: chr27:26413064-26413385 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 221
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 170, 70

Conread position: 117-444
Cow position: chr27:4819519-4819848 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 225
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 163, 75

Conread position: 117-445
Cow position: chr27:4812685-4813020 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 117-448
Cow position: chr27:27038652-27038977 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 224
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 120, 69

Conread position: 117-449
Cow position: chr27:24321380-24321049 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 13

Conread position: 117-450
Cow position: chr27:16284664-16284334 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 163

Conread position: 117-450
Cow position: chr27:20067787-20068116 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 233
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 75, 54

Conread position: 117-450
Cow position: chr27:20641154-20641475 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 55

Conread position: 117-450
Cow position: chr27:24014549-24014881 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 70

Conread position: 117-476
Cow position: chr27:27640800-27641181 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 259
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 69, 310

Conread position: 117-477
Cow position: chr27:23128646-23128290 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 234
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 127, 54

Conread position: 117-479
Cow position: chr27:30406840-30407210 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 99

Conread position: 117-480
Cow position: chr27:16478157-16478507 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 255
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 166, 18

Conread position: 117-482
Cow position: chr27:23452671-23452289 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 258
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 69, 281

Conread position: 117-483
Cow position: chr27:25277328-25276964 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 69

Conread position: 117-486
Cow position: chr27:30915193-30914827 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 254
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 166, 69

Conread position: 117-488
Cow position: chr27:20283823-20283458 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 248
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 177, 58

Conread position: 117-491
Cow position: chr27:22035182-22035560 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 199

Conread position: 117-492
Cow position: chr27:29493725-29494085 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 260
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 230, 70

Conread position: 117-494
Cow position: chr27:22171489-22171114 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 13

Conread position: 117-494
Cow position: chr27:22220745-22220362 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 125

Conread position: 117-496
Cow position: chr27:15871353-15870969 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 249
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 61

Conread position: 117-496
Cow position: chr27:26424395-26424766 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 257
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 45, 21

Conread position: 117-496
Cow position: chr27:30890478-30890111 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 38

Conread position: 118-319
Cow position: chr27:20592174-20591969 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 158
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 119, 69

Conread position: 118-343
Cow position: chr27:28164221-28164438 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 39, 0

Conread position: 118-418
Cow position: chr27:13409978-13410272 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 202
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 37, 174

Conread position: 118-418
Cow position: chr27:30765222-30764921 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 212
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 119, 69

Conread position: 118-432
Cow position: chr27:20036938-20037240 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 220
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 207, 68

Conread position: 118-438
Cow position: chr27:30868549-30868870 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 223
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 68, 12

Conread position: 118-447
Cow position: chr27:18593460-18593134 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 12

Conread position: 118-479
Cow position: chr27:14670190-14670555 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 204

Conread position: 118-483
Cow position: chr27:19388209-19387846 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 191

Conread position: 119-334
Cow position: chr27:27055767-27055547 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 67, 0

Conread position: 119-418
Cow position: chr27:26508969-26509264 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 216
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 67, 11

Conread position: 119-440
Cow position: chr27:26433623-26433939 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 225
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 67, 16

Conread position: 119-454
Cow position: chr27:19647752-19648088 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 219
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 166, 67

Conread position: 119-492
Cow position: chr27:22418575-22418950 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 110

Conread position: 119-494
Cow position: chr27:17397257-17397639 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 352

Conread position: 119-494
Cow position: chr27:23917865-23918221 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 259
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 50, 38

Conread position: 119-496
Cow position: chr27:12596948-12596592 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 252
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 168, 42

Conread position: 120-331
Cow position: chr27:31499256-31499037 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 114, 66

Conread position: 120-378
Cow position: chr27:29283220-29283478 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 180
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 121, 67

Conread position: 120-412
Cow position: chr27:18030868-18031179 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 218
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 66, 0

Conread position: 120-482
Cow position: chr27:19718111-19717742 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 10

Conread position: 120-484
Cow position: chr27:26999236-26999598 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 252
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 120, 61

Conread position: 120-492
Cow position: chr27:30354155-30354524 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 66

Conread position: 123-418
Cow position: chr27:11435143-11435432 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 198
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 114, 63

Conread position: 123-450
Cow position: chr27:8353661-8353337 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 8

Conread position: 125-450
Cow position: chr27:29431639-29431327 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 233
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 61, 18

Conread position: 126-477
Cow position: chr27:27245170-27245523 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 237
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 60, 5

Conread position: 127-311
Cow position: chr27:27550566-27550746 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 158, 54

Conread position: 127-450
Cow position: chr27:13252191-13251874 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 225
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 59, 201

Conread position: 130-418
Cow position: chr27:4066-3787 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 209
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 56, 94

Conread position: 130-478
Cow position: chr27:20757877-20758200 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 256
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 80, 17

Conread position: 131-449
Cow position: chr27:29831509-29831838 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 224
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 55, 80

Conread position: 137-450
Cow position: chr27:15408872-15409178 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 50

Conread position: 139-309
Cow position: chr27:18434301-18434472 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 37, 142

Conread position: 142-478
Cow position: chr27:26426375-26426040 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 230
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 44, 174

Conread position: 144-450
Cow position: chr27:24477581-24477275 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 204
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 42, 144

Conread position: 145-418
Cow position: chr27:11480466-11480746 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 190
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 101, 42

Conread position: 145-450
Cow position: chr27:23891102-23890796 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 218
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 7, 43

Conread position: 147-474
Cow position: chr27:4944367-4944680 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 221
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 164, 40

Conread position: 149-482
Cow position: chr27:16781024-16780691 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 239
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 138, 46

Conread position: 152-478
Cow position: chr27:27460415-27460740 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 236
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 34, 157

Conread position: 153-302
Cow position: chr27:20498095-20497940 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 154-429
Cow position: chr27:22513520-22513798 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 204
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 32, 61

Conread position: 159-418
Cow position: chr27:28270997-28271260 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 180
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 75, 28

Conread position: 159-486
Cow position: chr27:7731099-7731436 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 217
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 82, 28

Conread position: 165-450
Cow position: chr27:1123178-1122890 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 113

Conread position: 165-492
Cow position: chr27:427116-426784 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 141

Conread position: 166-365
Cow position: chr27:4011816-4011622 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 76, 19

Conread position: 168-413
Cow position: chr27:20789239-20789484 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 185
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 115, 19

Conread position: 173-418
Cow position: chr27:19500097-19500343 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 170
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 22, 13

Conread position: 176-492
Cow position: chr27:16103936-16103625 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 16

Conread position: 177-479
Cow position: chr27:31148892-31148594 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 204
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 25, 6

Conread position: 185-420
Cow position: chr27:8168305-8168542 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 49, 132

Conread position: 186-335
Cow position: chr27:9697901-9697753 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 125, 0

Conread position: 188-478
Cow position: chr27:22569893-22569614 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 202
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 272, 107

Conread position: 193-421
Cow position: chr27:30389180-30389410 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 157
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 94, 37

Conread position: 193-459
Cow position: chr27:8405720-8405971 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 196
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 104, 48

Conread position: 195-450
Cow position: chr27:21213885-21213646 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 185
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 161, 73

Conread position: 198-418
Cow position: chr27:11151787-11151559 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 43, 159

Conread position: 200-414
Cow position: chr27:30804449-30804237 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 87, 126

Conread position: 201-438
Cow position: chr27:16626005-16625770 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 24

Conread position: 203-430
Cow position: chr27:4858540-4858761 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 154
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 114, 73

Conread position: 203-482
Cow position: chr27:23594422-23594145 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 199
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 217, 72

Conread position: 205-450
Cow position: chr27:29504543-29504791 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 165
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 81, 45

Conread position: 205-486
Cow position: chr27:22386974-22386700 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 199
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 82, 110

Conread position: 207-482
Cow position: chr27:15378378-15378648 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 195
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 106, 21

Conread position: 209-494
Cow position: chr27:26506823-26506555 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 201
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 242, 32

Conread position: 213-494
Cow position: chr27:20481281-20481544 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 198
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 45, 96

Conread position: 214-450
Cow position: chr27:20092743-20092976 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 100, 53

Conread position: 215-482
Cow position: chr27:23511084-23510811 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 195
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 72, 193

Conread position: 235-482
Cow position: chr27:15215307-15215056 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 165
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 56, 119

Conread position: 241-483
Cow position: chr27:590699-590935 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 160
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 93, 41

Conread position: 244-481
Cow position: chr27:26407100-26407335 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 46, 71

Conread position: 249-409
Cow position: chr27:24306888-24306728 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 145

Conread position: 252-494
Cow position: chr27:23107844-23108090 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 171
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 125

Conread position: 264-494
Cow position: chr27:23485258-23485026 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 24, 132

Conread position: 269-487
Cow position: chr27:12459321-12459109 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 69, 26

Conread position: 284-486
Cow position: chr27:23560007-23560209 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 44

Conread position: 295-494
Cow position: chr27:19509027-19508824 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 28, 0

Conread position: 319-492
Cow position: chr27:15002988-15003165 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 322-495
Cow position: chr27:7343442-7343614 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 100, 125

Conread position: 331-481
Cow position: chr27:788820-788972 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 120, 0

Show alignments to all cow chromosomes.