• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
rsug23_m4.y1
        

               
Conread position:
               
81-418
               

               
Cow position:
               
chr5:16508848-16509198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
27, 78
               

               
Conread position:
               
91-450
               

               
Cow position:
               
chr5:57736879-57737223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
99-488
               

               
Cow position:
               
chr5:30276464-30276855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 222
               

               
Conread position:
               
104-450
               

               
Cow position:
               
chr5:14630042-14629681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
18, 63
               

               
Conread position:
               
106-493
               

               
Cow position:
               
chr5:458261-458657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
133, 218
               

               
Conread position:
               
110-315
               

               
Cow position:
               
chr5:49558951-49559157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
112, 77
               

               
Conread position:
               
111-290
               

               
Cow position:
               
chr5:69099314-69099495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
75, 19
               

               
Conread position:
               
111-418
               

               
Cow position:
               
chr5:40039986-40039674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
75, 102
               

               
Conread position:
               
111-483
               

               
Cow position:
               
chr5:3204619-3204986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
13, 49
               

               
Conread position:
               
111-494
               

               
Cow position:
               
chr5:47601601-47601981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 206
               

               
Conread position:
               
114-494
               

               
Cow position:
               
chr5:55756652-55756242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
115-307
               

               
Cow position:
               
chr5:58229494-58229687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
121, 68
               

               
Conread position:
               
115-309
               

               
Cow position:
               
chr5:57271476-57271281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
125, 64
               

               
Conread position:
               
115-309
               

               
Cow position:
               
chr5:58144815-58144617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
119, 77
               

               
Conread position:
               
115-450
               

               
Cow position:
               
chr5:19813422-19813096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
196, 23
               

               
Conread position:
               
115-450
               

               
Cow position:
               
chr5:50533594-50533264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 71
               

               
Conread position:
               
115-478
               

               
Cow position:
               
chr5:46510078-46509713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 93
               

               
Conread position:
               
115-479
               

               
Cow position:
               
chr5:6045076-6045446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 343
               

               
Conread position:
               
115-479
               

               
Cow position:
               
chr5:39447742-39447382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 78
               

               
Conread position:
               
115-488
               

               
Cow position:
               
chr5:37646762-37646379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 109
               

               
Conread position:
               
115-494
               

               
Cow position:
               
chr5:9894337-9893953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 50
               

               
Conread position:
               
115-496
               

               
Cow position:
               
chr5:42063991-42064380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
123, 66
               

               
Conread position:
               
116-210
               

               
Cow position:
               
chr5:35683861-35683958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
116-276
               

               
Cow position:
               
chr5:66297028-66297187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
70, 102
               

               
Conread position:
               
116-291
               

               
Cow position:
               
chr5:28324135-28324318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
116-299
               

               
Cow position:
               
chr5:12672237-12672056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
173, 67
               

               
Conread position:
               
116-301
               

               
Cow position:
               
chr5:48178886-48178701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
70, 28
               

               
Conread position:
               
116-309
               

               
Cow position:
               
chr5:5848397-5848205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
165, 65
               

               
Conread position:
               
116-309
               

               
Cow position:
               
chr5:16184879-16185071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
171, 70
               

               
Conread position:
               
116-311
               

               
Cow position:
               
chr5:30816505-30816705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
70, 111
               

               
Conread position:
               
116-324
               

               
Cow position:
               
chr5:35145142-35145347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
181, 71
               

               
Conread position:
               
116-324
               

               
Cow position:
               
chr5:40595212-40595010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
170, 65
               

               
Conread position:
               
116-359
               

               
Cow position:
               
chr5:49820932-49821173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
70, 52
               

               
Conread position:
               
116-367
               

               
Cow position:
               
chr5:47888925-47888670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
70, 212
               

               
Conread position:
               
116-378
               

               
Cow position:
               
chr5:8024402-8024141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
65, 17
               

               
Conread position:
               
116-384
               

               
Cow position:
               
chr5:35235919-35235651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
130, 71
               

               
Conread position:
               
116-389
               

               
Cow position:
               
chr5:40928183-40927923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
116-393
               

               
Cow position:
               
chr5:60126163-60126438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
171, 71
               

               
Conread position:
               
116-402
               

               
Cow position:
               
chr5:34115452-34115728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
171, 67
               

               
Conread position:
               
116-404
               

               
Cow position:
               
chr5:27154812-27155095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 55
               

               
Conread position:
               
116-409
               

               
Cow position:
               
chr5:34638675-34638967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 71
               

               
Conread position:
               
116-411
               

               
Cow position:
               
chr5:56820470-56820179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
171, 38
               

               
Conread position:
               
116-416
               

               
Cow position:
               
chr5:27102998-27102704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
193, 71
               

               
Conread position:
               
116-418
               

               
Cow position:
               
chr5:7397336-7397633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
122, 70
               

               
Conread position:
               
116-418
               

               
Cow position:
               
chr5:26262884-26262587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
70, 43
               

               
Conread position:
               
116-418
               

               
Cow position:
               
chr5:26505616-26505307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
70, 241
               

               
Conread position:
               
116-418
               

               
Cow position:
               
chr5:40152265-40152577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
84, 68
               

               
Conread position:
               
116-418
               

               
Cow position:
               
chr5:64321538-64321846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 136
               

               
Conread position:
               
116-421
               

               
Cow position:
               
chr5:66815786-66815477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
70, 55
               

               
Conread position:
               
116-438
               

               
Cow position:
               
chr5:6528470-6528797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
89, 68
               

               
Conread position:
               
116-445
               

               
Cow position:
               
chr5:32697023-32696704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
116-449
               

               
Cow position:
               
chr5:45803850-45804182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 61
               

               
Conread position:
               
116-449
               

               
Cow position:
               
chr5:65933138-65932820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
85, 39
               

               
Conread position:
               
116-450
               

               
Cow position:
               
chr5:12323011-12322683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
214, 70
               

               
Conread position:
               
116-450
               

               
Cow position:
               
chr5:15426318-15426662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 14
               

               
Conread position:
               
116-450
               

               
Cow position:
               
chr5:15598444-15598114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 99
               

               
Conread position:
               
116-450
               

               
Cow position:
               
chr5:15722264-15721950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
171, 14
               

               
Conread position:
               
116-450
               

               
Cow position:
               
chr5:26377877-26377544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
179, 70
               

               
Conread position:
               
116-450
               

               
Cow position:
               
chr5:37645863-37646205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
70, 101
               

               
Conread position:
               
116-450
               

               
Cow position:
               
chr5:37814413-37814750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 98
               

               
Conread position:
               
116-450
               

               
Cow position:
               
chr5:62142460-62142800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 71
               

               
Conread position:
               
116-474
               

               
Cow position:
               
chr5:57935324-57934963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 241
               

               
Conread position:
               
116-476
               

               
Cow position:
               
chr5:21040184-21039832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
118, 62
               

               
Conread position:
               
116-476
               

               
Cow position:
               
chr5:27306108-27306454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
70, 92
               

               
Conread position:
               
116-477
               

               
Cow position:
               
chr5:65776596-65776236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
70, 213
               

               
Conread position:
               
116-478
               

               
Cow position:
               
chr5:17999705-17999347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
118, 67
               

               
Conread position:
               
116-478
               

               
Cow position:
               
chr5:25495548-25495203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
157, 54
               

               
Conread position:
               
116-478
               

               
Cow position:
               
chr5:35969332-35969687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
342, 71
               

               
Conread position:
               
116-478
               

               
Cow position:
               
chr5:41546104-41545744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 136
               

               
Conread position:
               
116-478
               

               
Cow position:
               
chr5:53835504-53835870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 70
               

               
Conread position:
               
116-478
               

               
Cow position:
               
chr5:66338874-66339230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
177, 14
               

               
Conread position:
               
116-478
               

               
Cow position:
               
chr5:67243715-67244067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 156
               

               
Conread position:
               
116-481
               

               
Cow position:
               
chr5:5111287-5110909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 108
               

               
Conread position:
               
116-483
               

               
Cow position:
               
chr5:55967093-55966723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 213
               

               
Conread position:
               
116-483
               

               
Cow position:
               
chr5:64524090-64523706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
70, 29
               

               
Conread position:
               
116-486
               

               
Cow position:
               
chr5:26990183-26990551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
181, 67
               

               
Conread position:
               
116-486
               

               
Cow position:
               
chr5:28302950-28302580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 72
               

               
Conread position:
               
116-488
               

               
Cow position:
               
chr5:38832910-38833283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 15
               

               
Conread position:
               
116-492
               

               
Cow position:
               
chr5:12351992-12351644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
116-492
               

               
Cow position:
               
chr5:16206353-16205986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
94, 26
               

               
Conread position:
               
116-492
               

               
Cow position:
               
chr5:21617245-21617624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 76
               

               
Conread position:
               
116-492
               

               
Cow position:
               
chr5:35684724-35685106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 157
               

               
Conread position:
               
116-494
               

               
Cow position:
               
chr5:11229884-11229499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 203
               

               
Conread position:
               
116-494
               

               
Cow position:
               
chr5:16938218-16937863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
126, 57
               

               
Conread position:
               
116-494
               

               
Cow position:
               
chr5:17087239-17086849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 288
               

               
Conread position:
               
116-494
               

               
Cow position:
               
chr5:20127844-20128225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
70, 36
               

               
Conread position:
               
116-494
               

               
Cow position:
               
chr5:21828654-21829038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 90
               

               
Conread position:
               
116-494
               

               
Cow position:
               
chr5:22242995-22242601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 19
               

               
Conread position:
               
116-494
               

               
Cow position:
               
chr5:24996434-24996048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 26
               

               
Conread position:
               
116-494
               

               
Cow position:
               
chr5:26467410-26467799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 17
               

               
Conread position:
               
116-494
               

               
Cow position:
               
chr5:41164878-41165253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 81
               

               
Conread position:
               
116-494
               

               
Cow position:
               
chr5:43858638-43858247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
194, 49
               

               
Conread position:
               
116-494
               

               
Cow position:
               
chr5:55942608-55942206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 84
               

               
Conread position:
               
116-494
               

               
Cow position:
               
chr5:57074545-57074161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 96
               

               
Conread position:
               
116-494
               

               
Cow position:
               
chr5:62172208-62172575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 70
               

               
Conread position:
               
116-494
               

               
Cow position:
               
chr5:65752646-65753030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 71
               

               
Conread position:
               
116-494
               

               
Cow position:
               
chr5:65941464-65941080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 340
               

               
Conread position:
               
117-238
               

               
Cow position:
               
chr5:4551922-4552046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
117-271
               

               
Cow position:
               
chr5:3281078-3280927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
69, 13
               

               
Conread position:
               
117-275
               

               
Cow position:
               
chr5:13536947-13537099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
117-304
               

               
Cow position:
               
chr5:42667598-42667411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
69, 53
               

               
Conread position:
               
117-306
               

               
Cow position:
               
chr5:28330541-28330352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
124, 70
               

               
Conread position:
               
117-309
               

               
Cow position:
               
chr5:6575797-6575607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
119, 70
               

               
Conread position:
               
117-309
               

               
Cow position:
               
chr5:45036812-45037005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
125, 70
               

               
Conread position:
               
117-311
               

               
Cow position:
               
chr5:44583328-44583142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
171, 69
               

               
Conread position:
               
117-311
               

               
Cow position:
               
chr5:68604649-68604845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
170, 70
               

               
Conread position:
               
117-318
               

               
Cow position:
               
chr5:60519957-60520155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
178, 64
               

               
Conread position:
               
117-320
               

               
Cow position:
               
chr5:58005034-58005246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
69, 146
               

               
Conread position:
               
117-335
               

               
Cow position:
               
chr5:22934666-22934445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 149
               

               
Conread position:
               
117-347
               

               
Cow position:
               
chr5:62826963-62826731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
175, 75
               

               
Conread position:
               
117-352
               

               
Cow position:
               
chr5:59443460-59443222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
69, 13
               

               
Conread position:
               
117-359
               

               
Cow position:
               
chr5:34288679-34288435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
69, 51
               

               
Conread position:
               
117-368
               

               
Cow position:
               
chr5:34915932-34916173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
117-379
               

               
Cow position:
               
chr5:12709676-12709942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
117, 70
               

               
Conread position:
               
117-381
               

               
Cow position:
               
chr5:38683146-38683414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
120, 68
               

               
Conread position:
               
117-383
               

               
Cow position:
               
chr5:64823522-64823254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 98
               

               
Conread position:
               
117-387
               

               
Cow position:
               
chr5:27403453-27403168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
117-389
               

               
Cow position:
               
chr5:65593670-65593935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
169, 69
               

               
Conread position:
               
117-404
               

               
Cow position:
               
chr5:32140916-32140630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
170, 46
               

               
Conread position:
               
117-411
               

               
Cow position:
               
chr5:31144985-31144702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
177, 26
               

               
Conread position:
               
117-411
               

               
Cow position:
               
chr5:45170153-45170444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
69, 127
               

               
Conread position:
               
117-417
               

               
Cow position:
               
chr5:5938115-5938413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
124, 68
               

               
Conread position:
               
117-417
               

               
Cow position:
               
chr5:29212739-29213029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
180, 70
               

               
Conread position:
               
117-418
               

               
Cow position:
               
chr5:24348902-24349199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 69
               

               
Conread position:
               
117-418
               

               
Cow position:
               
chr5:32394391-32394691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
103, 124
               

               
Conread position:
               
117-421
               

               
Cow position:
               
chr5:4507170-4506870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
69, 201
               

               
Conread position:
               
117-421
               

               
Cow position:
               
chr5:23140782-23140494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
124, 70
               

               
Conread position:
               
117-421
               

               
Cow position:
               
chr5:34506135-34505831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
199, 70
               

               
Conread position:
               
117-428
               

               
Cow position:
               
chr5:65887224-65886908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
69, 219
               

               
Conread position:
               
117-432
               

               
Cow position:
               
chr5:56467491-56467796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
117-439
               

               
Cow position:
               
chr5:34049900-34050231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
69, 93
               

               
Conread position:
               
117-447
               

               
Cow position:
               
chr5:31640218-31640546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
69, 127
               

               
Conread position:
               
117-447
               

               
Cow position:
               
chr5:58793824-58793486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 101
               

               
Conread position:
               
117-449
               

               
Cow position:
               
chr5:28927802-28927471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
69, 275
               

               
Conread position:
               
117-449
               

               
Cow position:
               
chr5:72007062-72006742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
178, 70
               

               
Conread position:
               
117-450
               

               
Cow position:
               
chr5:5257506-5257164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
67, 127
               

               
Conread position:
               
117-450
               

               
Cow position:
               
chr5:43992116-43992448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
69, 35
               

               
Conread position:
               
117-450
               

               
Cow position:
               
chr5:50821579-50821907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 56
               

               
Conread position:
               
117-450
               

               
Cow position:
               
chr5:56523964-56524298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 42
               

               
Conread position:
               
117-450
               

               
Cow position:
               
chr5:66257433-66257760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 30
               

               
Conread position:
               
117-451
               

               
Cow position:
               
chr5:44994247-44993924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
208, 70
               

               
Conread position:
               
117-474
               

               
Cow position:
               
chr5:74015730-74016087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
61, 72
               

               
Conread position:
               
117-476
               

               
Cow position:
               
chr5:55176677-55177036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
75, 245
               

               
Conread position:
               
117-478
               

               
Cow position:
               
chr5:9090233-9089871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 211
               

               
Conread position:
               
117-478
               

               
Cow position:
               
chr5:64758972-64758616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
117, 16
               

               
Conread position:
               
117-479
               

               
Cow position:
               
chr5:4710352-4709998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
345, 41
               

               
Conread position:
               
117-479
               

               
Cow position:
               
chr5:52165392-52165027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 294
               

               
Conread position:
               
117-479
               

               
Cow position:
               
chr5:61725760-61726117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 118
               

               
Conread position:
               
117-482
               

               
Cow position:
               
chr5:67932671-67932317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
57, 64
               

               
Conread position:
               
117-483
               

               
Cow position:
               
chr5:30253535-30253897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 28
               

               
Conread position:
               
117-486
               

               
Cow position:
               
chr5:14314312-14314687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 362
               

               
Conread position:
               
117-492
               

               
Cow position:
               
chr5:35826381-35826766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 192
               

               
Conread position:
               
117-494
               

               
Cow position:
               
chr5:11427451-11427062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
69, 197
               

               
Conread position:
               
117-494
               

               
Cow position:
               
chr5:36868536-36868908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
125, 70
               

               
Conread position:
               
117-494
               

               
Cow position:
               
chr5:40109292-40109655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 55
               

               
Conread position:
               
117-494
               

               
Cow position:
               
chr5:44796928-44796564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
125, 69
               

               
Conread position:
               
117-494
               

               
Cow position:
               
chr5:47704344-47703954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
17, 220
               

               
Conread position:
               
117-494
               

               
Cow position:
               
chr5:56028740-56028374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 200
               

               
Conread position:
               
117-494
               

               
Cow position:
               
chr5:56070644-56071029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 14
               

               
Conread position:
               
117-494
               

               
Cow position:
               
chr5:64137042-64137429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
124, 69
               

               
Conread position:
               
117-494
               

               
Cow position:
               
chr5:68718673-68719039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
204, 63
               

               
Conread position:
               
117-496
               

               
Cow position:
               
chr5:7193222-7193586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 70
               

               
Conread position:
               
117-496
               

               
Cow position:
               
chr5:53055762-53055386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
224, 35
               

               
Conread position:
               
117-496
               

               
Cow position:
               
chr5:66366321-66366682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
204, 68
               

               
Conread position:
               
118-291
               

               
Cow position:
               
chr5:63917618-63917446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
68, 12
               

               
Conread position:
               
118-318
               

               
Cow position:
               
chr5:73222481-73222679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
72, 12
               

               
Conread position:
               
118-324
               

               
Cow position:
               
chr5:47313265-47313478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
71, 57
               

               
Conread position:
               
118-351
               

               
Cow position:
               
chr5:72150043-72150275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
176, 67
               

               
Conread position:
               
118-375
               

               
Cow position:
               
chr5:7140313-7140057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
116, 68
               

               
Conread position:
               
118-386
               

               
Cow position:
               
chr5:32956300-32956034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
171, 29
               

               
Conread position:
               
118-411
               

               
Cow position:
               
chr5:46122559-46122268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
38, 58
               

               
Conread position:
               
118-418
               

               
Cow position:
               
chr5:34463794-34463486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
55, 70
               

               
Conread position:
               
118-418
               

               
Cow position:
               
chr5:47317178-47316882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
155, 69
               

               
Conread position:
               
118-421
               

               
Cow position:
               
chr5:33080996-33080697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
119, 12
               

               
Conread position:
               
118-448
               

               
Cow position:
               
chr5:8821220-8820891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 141
               

               
Conread position:
               
118-450
               

               
Cow position:
               
chr5:15363682-15364006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 158
               

               
Conread position:
               
118-450
               

               
Cow position:
               
chr5:26046125-26046446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
144, 171
               

               
Conread position:
               
118-450
               

               
Cow position:
               
chr5:29771306-29771652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
68, 137
               

               
Conread position:
               
118-450
               

               
Cow position:
               
chr5:29903730-29903399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 34
               

               
Conread position:
               
118-450
               

               
Cow position:
               
chr5:64139354-64139684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 184
               

               
Conread position:
               
118-478
               

               
Cow position:
               
chr5:44752519-44752156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 69
               

               
Conread position:
               
118-478
               

               
Cow position:
               
chr5:60715563-60715215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
117, 69
               

               
Conread position:
               
118-479
               

               
Cow position:
               
chr5:29827845-29828196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 68
               

               
Conread position:
               
118-479
               

               
Cow position:
               
chr5:63987656-63987293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
37, 69
               

               
Conread position:
               
118-486
               

               
Cow position:
               
chr5:64176329-64175967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 189
               

               
Conread position:
               
118-494
               

               
Cow position:
               
chr5:69337620-69337989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 17
               

               
Conread position:
               
119-326
               

               
Cow position:
               
chr5:56433591-56433805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
119-329
               

               
Cow position:
               
chr5:51357711-51357496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
119-335
               

               
Cow position:
               
chr5:52000011-52000228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
67, 196
               

               
Conread position:
               
119-418
               

               
Cow position:
               
chr5:65601253-65601549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
120, 66
               

               
Conread position:
               
119-445
               

               
Cow position:
               
chr5:61839981-61840309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
128, 7
               

               
Conread position:
               
119-450
               

               
Cow position:
               
chr5:71454802-71454488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
119-477
               

               
Cow position:
               
chr5:30302688-30303041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 68
               

               
Conread position:
               
119-477
               

               
Cow position:
               
chr5:39258330-39258656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
115, 36
               

               
Conread position:
               
119-478
               

               
Cow position:
               
chr5:43929941-43929581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 67
               

               
Conread position:
               
119-482
               

               
Cow position:
               
chr5:11668386-11668030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
127, 67
               

               
Conread position:
               
119-494
               

               
Cow position:
               
chr5:45845903-45845519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 330
               

               
Conread position:
               
120-450
               

               
Cow position:
               
chr5:20783418-20783746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
191, 67
               

               
Conread position:
               
120-451
               

               
Cow position:
               
chr5:42744587-42744905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
203, 46
               

               
Conread position:
               
121-482
               

               
Cow position:
               
chr5:32339181-32338805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
82, 66
               

               
Conread position:
               
122-272
               

               
Cow position:
               
chr5:24837150-24837001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
122-483
               

               
Cow position:
               
chr5:30629358-30628997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 23
               

               
Conread position:
               
123-444
               

               
Cow position:
               
chr5:20407870-20407560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 65
               

               
Conread position:
               
126-494
               

               
Cow position:
               
chr5:50599857-50600217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 21
               

               
Conread position:
               
127-311
               

               
Cow position:
               
chr5:75828934-75828754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
127-448
               

               
Cow position:
               
chr5:65588508-65588821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
224, 59
               

               
Conread position:
               
127-478
               

               
Cow position:
               
chr5:23169018-23168671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 59
               

               
Conread position:
               
131-417
               

               
Cow position:
               
chr5:33414603-33414320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
110, 26
               

               
Conread position:
               
131-450
               

               
Cow position:
               
chr5:7044905-7044581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 7
               

               
Conread position:
               
131-478
               

               
Cow position:
               
chr5:57575570-57575922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 329
               

               
Conread position:
               
131-488
               

               
Cow position:
               
chr5:44447082-44446706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 203
               

               
Conread position:
               
131-494
               

               
Cow position:
               
chr5:34561813-34562183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 345
               

               
Conread position:
               
132-421
               

               
Cow position:
               
chr5:8163018-8162723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
109, 209
               

               
Conread position:
               
133-418
               

               
Cow position:
               
chr5:50483055-50482768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
163, 54
               

               
Conread position:
               
133-427
               

               
Cow position:
               
chr5:39299334-39299631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
53, 166
               

               
Conread position:
               
133-450
               

               
Cow position:
               
chr5:22643411-22643108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
90, 54
               

               
Conread position:
               
133-496
               

               
Cow position:
               
chr5:72895499-72895859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
327, 53
               

               
Conread position:
               
136-450
               

               
Cow position:
               
chr5:4220790-4221102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
50, 206
               

               
Conread position:
               
136-450
               

               
Cow position:
               
chr5:7723480-7723789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
106, 51
               

               
Conread position:
               
136-494
               

               
Cow position:
               
chr5:69461144-69461506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 51
               

               
Conread position:
               
137-430
               

               
Cow position:
               
chr5:7755742-7755465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
150, 43
               

               
Conread position:
               
137-450
               

               
Cow position:
               
chr5:48010036-48009735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
150, 50
               

               
Conread position:
               
137-494
               

               
Cow position:
               
chr5:57591501-57591856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
49, 128
               

               
Conread position:
               
141-494
               

               
Cow position:
               
chr5:52667841-52668210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 32
               

               
Conread position:
               
143-450
               

               
Cow position:
               
chr5:3639666-3639373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 62
               

               
Conread position:
               
143-466
               

               
Cow position:
               
chr5:37808848-37808520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
151, 44
               

               
Conread position:
               
144-290
               

               
Cow position:
               
chr5:57576031-57576179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
42, 31
               

               
Conread position:
               
144-496
               

               
Cow position:
               
chr5:17768326-17767979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
31, 39
               

               
Conread position:
               
146-448
               

               
Cow position:
               
chr5:59631300-59631594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
8, 117
               

               
Conread position:
               
148-483
               

               
Cow position:
               
chr5:44028480-44028149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 38
               

               
Conread position:
               
149-421
               

               
Cow position:
               
chr5:19335972-19335686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
6, 204
               

               
Conread position:
               
149-448
               

               
Cow position:
               
chr5:6286604-6286311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
37, 48
               

               
Conread position:
               
151-382
               

               
Cow position:
               
chr5:3627331-3627096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 11
               

               
Conread position:
               
152-298
               

               
Cow position:
               
chr5:42705090-42705236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
90, 34
               

               
Conread position:
               
152-414
               

               
Cow position:
               
chr5:2262548-2262287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
34, 166
               

               
Conread position:
               
152-418
               

               
Cow position:
               
chr5:7277723-7277986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
90, 35
               

               
Conread position:
               
152-418
               

               
Cow position:
               
chr5:69520716-69520983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
34, 43
               

               
Conread position:
               
152-421
               

               
Cow position:
               
chr5:51935008-51935284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 170
               

               
Conread position:
               
152-438
               

               
Cow position:
               
chr5:55928768-55929056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
139, 35
               

               
Conread position:
               
152-454
               

               
Cow position:
               
chr5:62638731-62639032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
34, 163
               

               
Conread position:
               
153-369
               

               
Cow position:
               
chr5:3549951-3549738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
135, 33
               

               
Conread position:
               
154-477
               

               
Cow position:
               
chr5:25035413-25035110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
128, 14
               

               
Conread position:
               
157-325
               

               
Cow position:
               
chr5:71579005-71579175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
77, 9
               

               
Conread position:
               
157-418
               

               
Cow position:
               
chr5:11540213-11539958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
89, 29
               

               
Conread position:
               
157-465
               

               
Cow position:
               
chr5:74580623-74580931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
29, 113
               

               
Conread position:
               
158-482
               

               
Cow position:
               
chr5:30950088-30949756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
159-476
               

               
Cow position:
               
chr5:56014567-56014881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
160, 25
               

               
Conread position:
               
161-494
               

               
Cow position:
               
chr5:55955740-55956081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
25, 82
               

               
Conread position:
               
162-372
               

               
Cow position:
               
chr5:27015516-27015726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
24, 139
               

               
Conread position:
               
164-479
               

               
Cow position:
               
chr5:64592252-64591939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
166, 5
               

               
Conread position:
               
165-496
               

               
Cow position:
               
chr5:46512928-46512593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 152
               

               
Conread position:
               
166-438
               

               
Cow position:
               
chr5:46426011-46425743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
153, 21
               

               
Conread position:
               
166-494
               

               
Cow position:
               
chr5:45397418-45397738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
155, 21
               

               
Conread position:
               
167-433
               

               
Cow position:
               
chr5:16214528-16214794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
121, 20
               

               
Conread position:
               
167-453
               

               
Cow position:
               
chr5:54060114-54060403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
44, 19
               

               
Conread position:
               
168-494
               

               
Cow position:
               
chr5:3582414-3582726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
20, 61
               

               
Conread position:
               
169-494
               

               
Cow position:
               
chr5:57768130-57767814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
77, 17
               

               
Conread position:
               
170-416
               

               
Cow position:
               
chr5:67540360-67540111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
136, 122
               

               
Conread position:
               
170-494
               

               
Cow position:
               
chr5:42050391-42050718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 185
               

               
Conread position:
               
171-417
               

               
Cow position:
               
chr5:45999180-45998930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
15, 148
               

               
Conread position:
               
171-488
               

               
Cow position:
               
chr5:47696598-47696291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
15, 39
               

               
Conread position:
               
171-494
               

               
Cow position:
               
chr5:55232948-55232648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
273, 16
               

               
Conread position:
               
172-494
               

               
Cow position:
               
chr5:35247265-35246937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
68, 96
               

               
Conread position:
               
176-474
               

               
Cow position:
               
chr5:56877338-56877633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
214, 11
               

               
Conread position:
               
176-494
               

               
Cow position:
               
chr5:12673610-12673309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
276, 10
               

               
Conread position:
               
182-379
               

               
Cow position:
               
chr5:51801115-51800919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
52, 30
               

               
Conread position:
               
184-451
               

               
Cow position:
               
chr5:72951696-72951969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
185-418
               

               
Cow position:
               
chr5:65883918-65883680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
56, 151
               

               
Conread position:
               
185-420
               

               
Cow position:
               
chr5:63865653-63865889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
102, 209
               

               
Conread position:
               
185-488
               

               
Cow position:
               
chr5:70952018-70951725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
101, 131
               

               
Conread position:
               
186-450
               

               
Cow position:
               
chr5:64027149-64026895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
102, 126
               

               
Conread position:
               
187-471
               

               
Cow position:
               
chr5:57101916-57101635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
42, 91
               

               
Conread position:
               
191-371
               

               
Cow position:
               
chr5:7921536-7921359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
96, 136
               

               
Conread position:
               
191-416
               

               
Cow position:
               
chr5:54048485-54048263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 29
               

               
Conread position:
               
191-449
               

               
Cow position:
               
chr5:14473549-14473281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 15
               

               
Conread position:
               
192-365
               

               
Cow position:
               
chr5:38647224-38647394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
93, 16
               

               
Conread position:
               
193-457
               

               
Cow position:
               
chr5:39874989-39875255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
54, 111
               

               
Conread position:
               
193-485
               

               
Cow position:
               
chr5:991332-991636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
94, 120
               

               
Conread position:
               
195-418
               

               
Cow position:
               
chr5:45273633-45273409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
51, 125
               

               
Conread position:
               
195-479
               

               
Cow position:
               
chr5:54768042-54767753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
42, 133
               

               
Conread position:
               
196-418
               

               
Cow position:
               
chr5:57419926-57419702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
12, 129
               

               
Conread position:
               
196-428
               

               
Cow position:
               
chr5:63427137-63426903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
197-482
               

               
Cow position:
               
chr5:44726456-44726178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
95, 116
               

               
Conread position:
               
201-494
               

               
Cow position:
               
chr5:18289003-18289289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
41, 162
               

               
Conread position:
               
205-406
               

               
Cow position:
               
chr5:50799418-50799614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
118, 74
               

               
Conread position:
               
208-478
               

               
Cow position:
               
chr5:26477131-26476863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
131, 83
               

               
Conread position:
               
208-478
               

               
Cow position:
               
chr5:49440991-49440721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
105, 250
               

               
Conread position:
               
209-421
               

               
Cow position:
               
chr5:19523779-19523995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 124
               

               
Conread position:
               
212-494
               

               
Cow position:
               
chr5:33560849-33560567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
27, 104
               

               
Conread position:
               
213-438
               

               
Cow position:
               
chr5:45574501-45574732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
213-494
               

               
Cow position:
               
chr5:49474659-49474383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
75, 48
               

               
Conread position:
               
214-416
               

               
Cow position:
               
chr5:57561404-57561613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
28, 70
               

               
Conread position:
               
215-475
               

               
Cow position:
               
chr5:60016055-60016318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
73, 178
               

               
Conread position:
               
215-482
               

               
Cow position:
               
chr5:7697893-7698159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
72, 100
               

               
Conread position:
               
215-494
               

               
Cow position:
               
chr5:42670968-42670700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
160, 45
               

               
Conread position:
               
217-482
               

               
Cow position:
               
chr5:23678814-23678542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
25, 180
               

               
Conread position:
               
217-494
               

               
Cow position:
               
chr5:60183691-60183971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
70, 239
               

               
Conread position:
               
218-450
               

               
Cow position:
               
chr5:14921039-14920806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
94, 130
               

               
Conread position:
               
219-479
               

               
Cow position:
               
chr5:12434427-12434693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
90, 242
               

               
Conread position:
               
220-438
               

               
Cow position:
               
chr5:56635793-56636007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 103
               

               
Conread position:
               
221-475
               

               
Cow position:
               
chr5:41293974-41294233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 132
               

               
Conread position:
               
223-450
               

               
Cow position:
               
chr5:54375611-54375378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
65, 93
               

               
Conread position:
               
223-494
               

               
Cow position:
               
chr5:12557396-12557116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
64, 106
               

               
Conread position:
               
224-494
               

               
Cow position:
               
chr5:36039107-36038833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
96, 120
               

               
Conread position:
               
227-449
               

               
Cow position:
               
chr5:73418382-73418167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
67, 21
               

               
Conread position:
               
229-492
               

               
Cow position:
               
chr5:17555126-17554866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
94, 14
               

               
Conread position:
               
230-479
               

               
Cow position:
               
chr5:30232802-30233058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
30, 212
               

               
Conread position:
               
235-473
               

               
Cow position:
               
chr5:35976429-35976654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
244-494
               

               
Cow position:
               
chr5:43402817-43403080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
247-482
               

               
Cow position:
               
chr5:69636155-69636377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
48, 68
               

               
Conread position:
               
249-476
               

               
Cow position:
               
chr5:66551977-66551743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
259-494
               

               
Cow position:
               
chr5:17602267-17602034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
70, 58
               

               
Conread position:
               
263-495
               

               
Cow position:
               
chr5:59627038-59626800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
28, 181
               

               
Conread position:
               
271-492
               

               
Cow position:
               
chr5:69099665-69099888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
43, 11
               

               
Conread position:
               
279-421
               

               
Cow position:
               
chr5:63192788-63192646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
52, 35
               

               
Conread position:
               
279-492
               

               
Cow position:
               
chr5:67118372-67118587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
37, 148
               

               
Conread position:
               
281-478
               

               
Cow position:
               
chr5:56339066-56338866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
11, 34
               

               
Conread position:
               
282-471
               

               
Cow position:
               
chr5:56517057-56517249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 117
               

               
Conread position:
               
284-448
               

               
Cow position:
               
chr5:61102673-61102838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
90, 77
               

               
Conread position:
               
284-483
               

               
Cow position:
               
chr5:20288305-20288102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
26, 43
               

               
Conread position:
               
286-450
               

               
Cow position:
               
chr5:35982780-35982613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
44, 28
               

               
Conread position:
               
286-494
               

               
Cow position:
               
chr5:66530878-66531086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
28, 140
               

               
Conread position:
               
290-483
               

               
Cow position:
               
chr5:22795178-22795374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
24, 102
               

               
Conread position:
               
290-492
               

               
Cow position:
               
chr5:57686776-57686572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
21, 176
               

               
Conread position:
               
293-494
               

               
Cow position:
               
chr5:26549174-26548972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
303-494
               

               
Cow position:
               
chr5:38168868-38169064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
17, 150
               

               
Conread position:
               
321-477
               

               
Cow position:
               
chr5:50824585-50824743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
325-450
               

               
Cow position:
               
chr5:21223323-21223447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
332-450
               

               
Cow position:
               
chr5:12169762-12169645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               
Show alignments to all cow chromosomes.