Cow genome map
| Conread name: | rtes09_h18.y1 |
| Conread position: | 1-256 |
| Cow position: | chr17:22552583-22552328 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-257 |
| Cow position: | chr17:22552163-22551907 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-265 |
| Cow position: | chr17:22552499-22552235 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 190, 184 |
| Conread position: | 1-265 |
| Cow position: | chr17:22590001-22589737 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-266 |
| Cow position: | chr17:22589665-22589400 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 108, 101 |
| Conread position: | 1-267 |
| Cow position: | chr17:22473687-22473954 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 237, 0 |
| Conread position: | 1-268 |
| Cow position: | chr17:22551743-22551476 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-276 |
| Cow position: | chr17:22552331-22552056 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-276 |
| Cow position: | chr17:22589749-22589474 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 192, 185 |
| Conread position: | 1-277 |
| Cow position: | chr17:22590085-22589809 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-277 |
| Cow position: | chr17:22590169-22589893 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-280 |
| Cow position: | chr17:22499294-22499015 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 196, 200 |
| Conread position: | 1-293 |
| Cow position: | chr17:22551827-22551535 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 201 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-293 |
| Cow position: | chr17:22589581-22589291 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 191, 198 |
| Conread position: | 1-293 |
| Cow position: | chr17:22589833-22589541 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 277, 266 |
| Conread position: | 1-294 |
| Cow position: | chr17:22552919-22552626 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 47, 42 |
| Conread position: | 1-296 |
| Cow position: | chr17:22552247-22551952 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-301 |
| Cow position: | chr17:22551995-22551694 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 296, 0 |
| Conread position: | 1-301 |
| Cow position: | chr17:22552415-22552114 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 106, 100 |
| Conread position: | 1-301 |
| Cow position: | chr17:22553087-22552786 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 108, 99 |
| Conread position: | 1-316 |
| Cow position: | chr17:22452112-22451794 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 201 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 118, 113 |
| Conread position: | 7-260 |
| Cow position: | chr17:22552829-22552576 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 183 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-265 |
| Cow position: | chr17:22499372-22499114 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-294 |
| Cow position: | chr17:22551894-22551618 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 260, 248 |
| Conread position: | 30-293 |
| Cow position: | chr17:22553142-22552879 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 161, 152 |
| Conread position: | 30-312 |
| Cow position: | chr17:22552974-22552689 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 8, 17 |
| Conread position: | 48-298 |
| Cow position: | chr17:22499163-22498913 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 65, 69 |
Show alignments to all cow chromosomes.