Cow genome map
| Conread name: | rtes09_h18.y1 |
| Conread position: | 1-248 |
| Cow position: | chr21:12659184-12659431 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 20, 15 |
| Conread position: | 1-248 |
| Cow position: | chr21:12659268-12659515 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 20, 14 |
| Conread position: | 1-248 |
| Cow position: | chr21:12659604-12659851 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 20, 16 |
| Conread position: | 1-248 |
| Cow position: | chr21:12659688-12659935 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 104, 96 |
| Conread position: | 1-255 |
| Cow position: | chr21:12608830-12608576 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 199, 185 |
| Conread position: | 1-260 |
| Cow position: | chr21:12659436-12659695 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 20, 15 |
| Conread position: | 1-265 |
| Cow position: | chr21:12659016-12659280 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 104, 96 |
| Conread position: | 5-248 |
| Cow position: | chr21:12659524-12659767 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 100, 96 |
| Conread position: | 6-246 |
| Cow position: | chr21:12608909-12608669 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-245 |
| Cow position: | chr21:12608488-12608250 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 14, 10 |
| Conread position: | 7-248 |
| Cow position: | chr21:12658938-12659179 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 14, 9 |
| Conread position: | 7-248 |
| Cow position: | chr21:12659106-12659347 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 14, 9 |
| Conread position: | 7-248 |
| Cow position: | chr21:34222862-34222621 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 209, 199 |
| Conread position: | 7-249 |
| Cow position: | chr21:34223030-34222788 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-254 |
| Cow position: | chr21:34222946-34222699 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-258 |
| Cow position: | chr21:12659358-12659609 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 11, 18 |
| Conread position: | 8-247 |
| Cow position: | chr21:12658855-12659094 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 97, 92 |
| Conread position: | 10-244 |
| Cow position: | chr21:12659779-12660015 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 20-255 |
| Cow position: | chr21:12608307-12608072 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 169, 161 |
| Conread position: | 22-247 |
| Cow position: | chr21:12608557-12608332 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 83, 79 |
| Conread position: | 22-250 |
| Cow position: | chr21:12608725-12608497 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 94, 80 |
| Conread position: | 40-260 |
| Cow position: | chr21:12658803-12659023 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 149, 141 |
| Conread position: | 43-266 |
| Cow position: | chr21:12608200-12607977 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 62, 57 |
| Conread position: | 49-247 |
| Cow position: | chr21:12608614-12608416 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 56, 51 |
Show alignments to all cow chromosomes.