Cow genome map
| Conread name: | rtes09_h18.y1 |
| Conread position: | 1-242 |
| Cow position: | chr22:12458424-12458183 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 212, 216 |
| Conread position: | 1-243 |
| Cow position: | chr22:11701453-11701695 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 34, 27 |
| Conread position: | 1-246 |
| Cow position: | chr22:11666715-11666960 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 49, 36 |
| Conread position: | 1-248 |
| Cow position: | chr22:11640874-11641121 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 110, 115 |
| Conread position: | 1-250 |
| Cow position: | chr22:12418759-12418510 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 118, 111 |
| Conread position: | 1-250 |
| Cow position: | chr22:14429914-14430163 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-259 |
| Cow position: | chr22:11666631-11666889 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 49, 36 |
| Conread position: | 1-264 |
| Cow position: | chr22:11640958-11641221 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 21, 31 |
| Conread position: | 1-264 |
| Cow position: | chr22:11701201-11701464 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 27 |
| Conread position: | 1-265 |
| Cow position: | chr22:11640706-11640970 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 49, 42 |
| Conread position: | 1-265 |
| Cow position: | chr22:11640790-11641054 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 190, 184 |
| Conread position: | 1-265 |
| Cow position: | chr22:11641042-11641306 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 49, 28 |
| Conread position: | 1-265 |
| Cow position: | chr22:12475617-12475353 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-265 |
| Cow position: | chr22:12475785-12475521 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 44, 49 |
| Conread position: | 1-265 |
| Cow position: | chr22:14468075-14468339 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 37, 48 |
| Conread position: | 1-276 |
| Cow position: | chr22:11701285-11701559 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 49, 36 |
| Conread position: | 1-276 |
| Cow position: | chr22:12418843-12418569 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 202, 195 |
| Conread position: | 1-277 |
| Cow position: | chr22:12458592-12458316 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 35, 30 |
| Conread position: | 1-292 |
| Cow position: | chr22:11666547-11666839 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 27 |
| Conread position: | 1-295 |
| Cow position: | chr22:12458508-12458214 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-246 |
| Cow position: | chr22:11641216-11641455 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 22 |
| Conread position: | 7-248 |
| Cow position: | chr22:12431634-12431393 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-250 |
| Cow position: | chr22:12431214-12430971 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-254 |
| Cow position: | chr22:12475527-12475279 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 16, 11 |
| Conread position: | 7-265 |
| Cow position: | chr22:12399402-12399144 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 43, 37 |
| Conread position: | 7-265 |
| Cow position: | chr22:12419005-12418747 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-265 |
| Cow position: | chr22:12499144-12499402 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 119, 110 |
| Conread position: | 7-276 |
| Cow position: | chr22:12499564-12499833 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 32, 26 |
| Conread position: | 7-295 |
| Cow position: | chr22:12475863-12475575 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 32, 26 |
| Conread position: | 9-250 |
| Cow position: | chr22:39433166-39433395 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 10-276 |
| Cow position: | chr22:12399567-12399301 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 124, 119 |
| Conread position: | 10-276 |
| Cow position: | chr22:12431799-12431533 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 115, 124 |
| Conread position: | 10-277 |
| Cow position: | chr22:14429839-14430106 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-254 |
| Cow position: | chr22:12499742-12499980 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 5, 201 |
| Conread position: | 47-194 |
| Cow position: | chr22:39433276-39433422 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 49-250 |
| Cow position: | chr22:11641174-11641375 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 70, 64 |
| Conread position: | 49-250 |
| Cow position: | chr22:12431676-12431475 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 49-259 |
| Cow position: | chr22:11701417-11701627 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 57, 67 |
| Conread position: | 49-265 |
| Cow position: | chr22:12418879-12418663 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 49-265 |
| Cow position: | chr22:12431508-12431292 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 142, 136 |
Show alignments to all cow chromosomes.