Cow genome map
| Conread name: | rtes09_h18.y1 |
| Conread position: | 1-242 |
| Cow position: | chr23:24560370-24560131 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 222, 0 |
| Conread position: | 1-249 |
| Cow position: | chr23:25660335-25660583 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 120, 132 |
| Conread position: | 1-250 |
| Cow position: | chr23:24560706-24560457 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-250 |
| Cow position: | chr23:24639652-24639901 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 190, 181 |
| Conread position: | 1-250 |
| Cow position: | chr23:25660167-25660416 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-265 |
| Cow position: | chr23:24547314-24547050 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 17, 27 |
| Conread position: | 1-265 |
| Cow position: | chr23:24560622-24560358 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-248 |
| Cow position: | chr23:25724022-25723780 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 17, 10 |
| Conread position: | 7-247 |
| Cow position: | chr23:24639826-24640066 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-248 |
| Cow position: | chr23:24535771-24535530 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 206, 210 |
| Conread position: | 7-248 |
| Cow position: | chr23:24546972-24546731 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-248 |
| Cow position: | chr23:24639490-24639731 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-248 |
| Cow position: | chr23:24654055-24654296 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-249 |
| Cow position: | chr23:24547056-24546814 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-250 |
| Cow position: | chr23:24639574-24639817 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-253 |
| Cow position: | chr23:24535687-24535442 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 122, 126 |
| Conread position: | 7-255 |
| Cow position: | chr23:24639742-24639990 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 100, 91 |
| Conread position: | 7-265 |
| Cow position: | chr23:24547140-24546882 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 183 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-265 |
| Cow position: | chr23:24560532-24560274 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-265 |
| Cow position: | chr23:24626330-24626588 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-277 |
| Cow position: | chr23:24560448-24560178 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-295 |
| Cow position: | chr23:24626414-24626702 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 197 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-295 |
| Cow position: | chr23:25626722-25627009 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 224, 235 |
| Conread position: | 10-222 |
| Cow position: | chr23:24522375-24522163 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 25, 20 |
| Conread position: | 10-250 |
| Cow position: | chr23:24547221-24546981 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-265 |
| Cow position: | chr23:24560781-24560526 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-270 |
| Cow position: | chr23:24522459-24522200 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 109, 104 |
| Conread position: | 22-265 |
| Cow position: | chr23:25660272-25660515 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 49-248 |
| Cow position: | chr23:25724063-25723864 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 58, 51 |
| Conread position: | 53-308 |
| Cow position: | chr23:25660134-25660393 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 63-298 |
| Cow position: | chr23:24626302-24626537 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 215, 210 |
Show alignments to all cow chromosomes.