Cow genome map

Conread name: rtes09_h18.y1

Conread position: 1-248
Cow position: chr28:9253202-9253449 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 1-250
Cow position: chr28:7810690-7810939 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 167
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1-295
Cow position: chr28:11333870-11333576 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 183
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 29

Conread position: 1-296
Cow position: chr28:9290351-9290644 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 195
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 24, 0

Conread position: 1-301
Cow position: chr28:7757599-7757900 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 199
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 277, 266

Conread position: 5-254
Cow position: chr28:34696183-34696432 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 166
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 119, 125

Conread position: 5-265
Cow position: chr28:34696267-34696527 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 174
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 6-261
Cow position: chr28:33210332-33210588 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 168
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 94, 101

Conread position: 6-279
Cow position: chr28:11333781-11333508 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 172
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 7-232
Cow position: chr28:7758109-7758334 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 152
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 42

Conread position: 7-232
Cow position: chr28:34696353-34696578 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 150
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 7-242
Cow position: chr28:9253376-9253611 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 7-246
Cow position: chr28:33210417-33210657 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 162
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 9, 24

Conread position: 7-249
Cow position: chr28:7757437-7757679 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 7-250
Cow position: chr28:7810285-7810528 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 164
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 7-255
Cow position: chr28:7757857-7758105 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 36

Conread position: 7-265
Cow position: chr28:7757521-7757779 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 178
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 7-265
Cow position: chr28:7757773-7758031 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 169
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 100, 94

Conread position: 7-265
Cow position: chr28:7758025-7758283 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 170
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 126, 120

Conread position: 7-276
Cow position: chr28:9253040-9253308 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 191
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 43, 38

Conread position: 7-276
Cow position: chr28:9253124-9253392 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 181
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 260, 0

Conread position: 7-285
Cow position: chr28:7810369-7810637 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 185
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 172, 0

Conread position: 7-295
Cow position: chr28:7758429-7758717 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 186
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 178, 193

Conread position: 8-245
Cow position: chr28:9298756-9298992 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 156
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 37, 41

Conread position: 8-248
Cow position: chr28:34696018-34696258 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 157
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 113, 122

Conread position: 8-248
Cow position: chr28:34696102-34696342 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 157
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 8-294
Cow position: chr28:9299243-9299529 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 179
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 274, 259

Conread position: 10-250
Cow position: chr28:9290443-9290682 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 21, 0

Conread position: 10-265
Cow position: chr28:7757692-7757947 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 171
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 181, 175

Conread position: 10-265
Cow position: chr28:7757944-7758199 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 166
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 207, 201

Conread position: 21-264
Cow position: chr28:9290123-9290362 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 162
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 83, 0

Conread position: 21-265
Cow position: chr28:9252970-9253214 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 163
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 108, 112

Conread position: 21-284
Cow position: chr28:7757367-7757630 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 176
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 29, 23

Conread position: 22-249
Cow position: chr28:33210264-33210491 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 148
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 162, 169

Conread position: 31-300
Cow position: chr28:9252895-9253165 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 177
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 50, 183

Conread position: 32-250
Cow position: chr28:9299186-9299401 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 143
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 48-265
Cow position: chr28:7810569-7810786 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 147
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 48-265
Cow position: chr28:9253333-9253550 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 49-265
Cow position: chr28:7758387-7758603 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 73, 83

Conread position: 52-276
Cow position: chr28:7810657-7810880 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 145
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 215, 0

Show alignments to all cow chromosomes.