Cow genome map


           Conread name:
           rtes09_h18.y1
        

               Conread position:
               1-245
               

               Cow position:
               chr6:49428831-49429075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               104, 96
               

               Conread position:
               1-248
               

               Cow position:
               chr6:49428663-49428910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               20, 15
               

               Conread position:
               1-248
               

               Cow position:
               chr6:49428747-49428994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               188, 180
               

               Conread position:
               1-260
               

               Cow position:
               chr6:49428579-49428838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               34, 28
               

               Conread position:
               1-307
               

               Cow position:
               chr6:49429251-49429555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               270, 0
               

               Conread position:
               7-250
               

               Cow position:
               chr6:49341013-49341256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               118, 109
               

               Conread position:
               8-247
               

               Cow position:
               chr6:49341098-49341337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               34, 25
               

               Conread position:
               8-265
               

               Cow position:
               chr6:49340930-49341187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               201, 192
               

               Conread position:
               49-248
               

               Cow position:
               chr6:49428543-49428742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               70, 63
               
Show alignments to all cow chromosomes.