Cow genome map

Conread name: rtes18_h15r1.y1

Conread position: 189-380
Cow position: chr1:100399942-100400130 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 9

Conread position: 192-399
Cow position: chr1:63992068-63992278 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 6, 35

Conread position: 202-407
Cow position: chr1:32035458-32035663 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 62

Conread position: 203-407
Cow position: chr1:22824159-22823952 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 51, 11

Conread position: 204-405
Cow position: chr1:84103806-84104012 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 19, 134

Conread position: 206-405
Cow position: chr1:63994311-63994506 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 102, 46

Conread position: 207-406
Cow position: chr1:11488915-11489111 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 40, 31

Conread position: 208-396
Cow position: chr1:32014436-32014256 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 145
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 102, 0

Conread position: 210-407
Cow position: chr1:76735238-76735434 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 140
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 125, 28

Conread position: 212-407
Cow position: chr1:34771257-34771456 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 46, 68

Conread position: 213-407
Cow position: chr1:31630044-31630240 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 97, 19

Conread position: 214-399
Cow position: chr1:48213905-48214101 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 7

Conread position: 214-405
Cow position: chr1:43855529-43855344 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 27

Conread position: 214-405
Cow position: chr1:74083951-74084142 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 9, 13

Conread position: 214-407
Cow position: chr1:78782228-78782022 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 11, 121

Conread position: 214-407
Cow position: chr1:92188203-92188004 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 18

Conread position: 215-392
Cow position: chr1:36625759-36625579 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 44, 131

Conread position: 215-407
Cow position: chr1:874903-874701 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 97

Conread position: 215-407
Cow position: chr1:81391158-81390969 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 94, 47

Conread position: 217-399
Cow position: chr1:60404003-60403823 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 91, 30

Conread position: 217-399
Cow position: chr1:95654177-95654362 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 218-389
Cow position: chr1:8134164-8133990 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 28, 129

Conread position: 218-405
Cow position: chr1:56719576-56719389 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 125

Conread position: 219-400
Cow position: chr1:69911347-69911159 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 41, 28

Conread position: 219-406
Cow position: chr1:39683913-39684096 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 91, 19

Conread position: 220-407
Cow position: chr1:96558616-96558802 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 89, 12

Conread position: 223-407
Cow position: chr1:63212030-63212212 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 87, 35

Conread position: 225-399
Cow position: chr1:71665707-71665875 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 84, 19

Conread position: 225-399
Cow position: chr1:73397842-73398017 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 23, 36

Conread position: 225-407
Cow position: chr1:25956123-25955942 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 175, 17

Conread position: 225-407
Cow position: chr1:53403013-53402828 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 31, 119

Conread position: 226-391
Cow position: chr1:34767523-34767353 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 136
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 34, 26

Conread position: 226-396
Cow position: chr1:15103115-15102943 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 20, 108

Conread position: 226-397
Cow position: chr1:40303774-40303610 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 6, 0

Conread position: 226-407
Cow position: chr1:98556891-98557072 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 84, 97

Conread position: 227-396
Cow position: chr1:23968839-23968998 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 227-399
Cow position: chr1:81515464-81515290 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 82, 31

Conread position: 228-396
Cow position: chr1:3535290-3535130 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 16, 0

Conread position: 228-399
Cow position: chr1:22231877-22231705 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 26, 108

Conread position: 228-399
Cow position: chr1:31801694-31801862 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 92

Conread position: 228-399
Cow position: chr1:49297873-49297708 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 81, 24

Conread position: 228-403
Cow position: chr1:97144247-97144413 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 16, 25

Conread position: 228-405
Cow position: chr1:102768401-102768226 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 5, 17

Conread position: 228-407
Cow position: chr1:34001266-34001094 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 159, 16

Conread position: 228-407
Cow position: chr1:52435502-52435319 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 97

Conread position: 228-407
Cow position: chr1:61005334-61005515 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 16

Conread position: 228-407
Cow position: chr1:67919357-67919182 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 96

Conread position: 228-407
Cow position: chr1:84595119-84594935 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 8, 25

Conread position: 229-372
Cow position: chr1:36306901-36306759 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 80, 15

Conread position: 229-381
Cow position: chr1:709676-709830 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 56

Conread position: 229-393
Cow position: chr1:43340409-43340574 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 158, 81

Conread position: 229-396
Cow position: chr1:73374871-73375042 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 11, 105

Conread position: 229-396
Cow position: chr1:100552190-100552035 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 229-399
Cow position: chr1:6394780-6394614 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 78, 29

Conread position: 229-399
Cow position: chr1:7443210-7443033 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 229-399
Cow position: chr1:16060787-16060947 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 81, 23

Conread position: 229-399
Cow position: chr1:38544021-38544198 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 229-399
Cow position: chr1:80423509-80423675 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 81, 29

Conread position: 229-399
Cow position: chr1:86113172-86113343 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 81, 116

Conread position: 229-399
Cow position: chr1:89146653-89146818 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 79, 15

Conread position: 229-399
Cow position: chr1:95153099-95152928 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 25, 115

Conread position: 229-401
Cow position: chr1:80870601-80870433 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 229-405
Cow position: chr1:38419252-38419072 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 21, 55

Conread position: 229-405
Cow position: chr1:38706630-38706805 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 171, 29

Conread position: 229-405
Cow position: chr1:83677102-83677275 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 79, 15

Conread position: 229-407
Cow position: chr1:731751-731926 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 81, 15

Conread position: 229-407
Cow position: chr1:5751534-5751360 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 81, 15

Conread position: 229-407
Cow position: chr1:9637255-9637076 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 25, 82

Conread position: 229-407
Cow position: chr1:20537430-20537252 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 145
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 26, 94

Conread position: 229-407
Cow position: chr1:22448017-22448208 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 229-407
Cow position: chr1:42797105-42796924 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 14, 101

Conread position: 229-407
Cow position: chr1:43296489-43296672 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 11, 0

Conread position: 229-407
Cow position: chr1:52509536-52509718 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 68

Conread position: 229-407
Cow position: chr1:70044567-70044400 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 171, 32

Conread position: 229-407
Cow position: chr1:71945855-71946037 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 30, 18

Conread position: 229-407
Cow position: chr1:72068609-72068788 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 25, 37

Conread position: 229-407
Cow position: chr1:72422181-72422361 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 25, 107

Conread position: 229-407
Cow position: chr1:79178860-79178675 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 16, 119

Conread position: 229-407
Cow position: chr1:99637023-99637207 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 28, 121

Conread position: 230-393
Cow position: chr1:53370305-53370146 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 80, 8

Conread position: 230-396
Cow position: chr1:98468027-98467858 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 230-399
Cow position: chr1:90192638-90192473 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 79, 8

Conread position: 230-407
Cow position: chr1:41022638-41022466 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 145
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 80, 28

Conread position: 230-407
Cow position: chr1:86340235-86340421 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 230-407
Cow position: chr1:92792274-92792098 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 105, 14

Conread position: 230-407
Cow position: chr1:102730532-102730715 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 231-394
Cow position: chr1:41953777-41953940 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 77, 113

Conread position: 231-396
Cow position: chr1:55428725-55428896 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 14, 110

Conread position: 231-396
Cow position: chr1:83246647-83246485 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 79, 21

Conread position: 231-405
Cow position: chr1:54569927-54569747 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 24, 117

Conread position: 231-407
Cow position: chr1:32217464-32217289 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 12, 95

Conread position: 232-396
Cow position: chr1:50765832-50765671 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 77, 20

Conread position: 232-400
Cow position: chr1:66898274-66898442 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 78, 14

Conread position: 232-404
Cow position: chr1:88913539-88913370 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 168, 12

Conread position: 232-405
Cow position: chr1:33720323-33720150 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 77, 15

Conread position: 232-406
Cow position: chr1:45315411-45315588 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 78, 26

Conread position: 232-407
Cow position: chr1:484244-484420 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 78, 25

Conread position: 232-407
Cow position: chr1:1380227-1380044 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 13, 117

Conread position: 232-407
Cow position: chr1:6381999-6381819 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 20, 148

Conread position: 232-407
Cow position: chr1:38277801-38277981 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 23, 131

Conread position: 232-407
Cow position: chr1:42175945-42175774 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 12

Conread position: 232-407
Cow position: chr1:73020440-73020615 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 48

Conread position: 232-407
Cow position: chr1:81364480-81364307 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 78, 17

Conread position: 232-407
Cow position: chr1:92524235-92524061 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 78, 15

Conread position: 232-407
Cow position: chr1:100823261-100823084 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 77, 112

Conread position: 233-394
Cow position: chr1:81568811-81568966 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 77, 11

Conread position: 233-399
Cow position: chr1:31274762-31274933 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 14, 93

Conread position: 233-399
Cow position: chr1:81290724-81290563 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 233-399
Cow position: chr1:89297889-89298053 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 43, 14

Conread position: 233-399
Cow position: chr1:89301498-89301662 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 43, 14

Conread position: 233-405
Cow position: chr1:22828357-22828521 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 76, 16

Conread position: 233-405
Cow position: chr1:64458191-64458014 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 76, 26

Conread position: 233-407
Cow position: chr1:3666811-3666984 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 77, 19

Conread position: 233-407
Cow position: chr1:43379145-43379315 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 75, 14

Conread position: 233-407
Cow position: chr1:52496992-52496818 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 22, 53

Conread position: 233-407
Cow position: chr1:54258787-54258614 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 143
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 77, 14

Conread position: 233-407
Cow position: chr1:71664670-71664850 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 22, 93

Conread position: 234-399
Cow position: chr1:4294565-4294401 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 20, 56

Conread position: 234-400
Cow position: chr1:7966067-7965902 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 5, 26

Conread position: 234-404
Cow position: chr1:20202516-20202356 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 76, 18

Conread position: 234-406
Cow position: chr1:54156511-54156687 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 147
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 16, 101

Conread position: 234-407
Cow position: chr1:24132841-24133016 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 28, 91

Conread position: 234-407
Cow position: chr1:52912675-52912850 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 72, 16

Conread position: 235-379
Cow position: chr1:5872558-5872702 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 75, 24

Conread position: 235-387
Cow position: chr1:64139959-64139807 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 74, 23

Conread position: 235-396
Cow position: chr1:83222207-83222044 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 19, 50

Conread position: 235-399
Cow position: chr1:30862191-30862359 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 114

Conread position: 235-406
Cow position: chr1:1489188-1489356 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 73, 23

Conread position: 235-407
Cow position: chr1:99642153-99642322 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 165, 32

Conread position: 238-399
Cow position: chr1:19515405-19515562 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 14

Conread position: 238-403
Cow position: chr1:87072910-87072750 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 16, 72

Conread position: 238-405
Cow position: chr1:59551654-59551486 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 71, 92

Conread position: 238-406
Cow position: chr1:23050651-23050480 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 17, 98

Conread position: 238-407
Cow position: chr1:71228310-71228139 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 72, 106

Conread position: 239-396
Cow position: chr1:78801762-78801919 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 71, 96

Conread position: 239-398
Cow position: chr1:47190778-47190937 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 15, 33

Conread position: 239-404
Cow position: chr1:94712948-94713115 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 15, 105

Conread position: 239-407
Cow position: chr1:46245521-46245693 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 15, 86

Conread position: 239-407
Cow position: chr1:95835580-95835751 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 141
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 13, 97

Conread position: 240-396
Cow position: chr1:3815469-3815625 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 69, 10

Conread position: 240-399
Cow position: chr1:30028019-30028175 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 70, 82

Conread position: 240-400
Cow position: chr1:4391054-4391215 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 14, 83

Conread position: 241-399
Cow position: chr1:3923592-3923743 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 241-399
Cow position: chr1:15547676-15547527 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 241-399
Cow position: chr1:63461090-63460935 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 69, 81

Conread position: 241-399
Cow position: chr1:71119733-71119578 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 128
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 69, 81

Conread position: 242-393
Cow position: chr1:84815349-84815193 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 242-394
Cow position: chr1:44814451-44814608 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 242-396
Cow position: chr1:56749025-56748872 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 68, 81

Conread position: 242-399
Cow position: chr1:16961780-16961953 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 242-406
Cow position: chr1:69250646-69250482 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 18, 70

Conread position: 242-407
Cow position: chr1:26895602-26895764 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 68, 14

Conread position: 242-407
Cow position: chr1:94823179-94823345 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 158, 16

Conread position: 243-399
Cow position: chr1:29971326-29971485 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 13, 129

Conread position: 244-385
Cow position: chr1:101490399-101490259 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 244-389
Cow position: chr1:2715230-2715089 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 68

Conread position: 244-396
Cow position: chr1:95558248-95558097 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 65, 24

Conread position: 244-399
Cow position: chr1:6398295-6398462 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 244-399
Cow position: chr1:87095001-87095157 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 19, 92

Conread position: 244-400
Cow position: chr1:48301239-48301395 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 43

Conread position: 244-400
Cow position: chr1:62998008-62997852 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 66, 8

Conread position: 244-406
Cow position: chr1:1878235-1878068 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 16, 90

Conread position: 244-407
Cow position: chr1:3271358-3271194 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 64, 91

Conread position: 244-407
Cow position: chr1:18936624-18936790 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 11, 88

Conread position: 244-407
Cow position: chr1:20871346-20871512 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 92

Conread position: 244-407
Cow position: chr1:44321389-44321551 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 66, 14

Conread position: 244-407
Cow position: chr1:63530767-63530605 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 66, 14

Conread position: 244-407
Cow position: chr1:67529267-67529102 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 10, 99

Conread position: 244-407
Cow position: chr1:101177729-101177562 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 66, 8

Conread position: 245-405
Cow position: chr1:17056199-17056040 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 9, 77

Conread position: 245-407
Cow position: chr1:25021870-25022028 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 155, 65

Conread position: 246-399
Cow position: chr1:55260027-55260179 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 73

Conread position: 246-407
Cow position: chr1:31794797-31794962 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 5, 100

Conread position: 247-394
Cow position: chr1:92510142-92510288 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 63, 28

Conread position: 247-396
Cow position: chr1:65160335-65160188 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 63, 11

Conread position: 247-397
Cow position: chr1:3324082-3323930 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 5

Conread position: 247-399
Cow position: chr1:15875864-15875717 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 248-399
Cow position: chr1:57395300-57395450 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 87

Conread position: 249-396
Cow position: chr1:1496320-1496472 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 11, 88

Conread position: 249-407
Cow position: chr1:60987195-60987036 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 63, 10

Conread position: 249-407
Cow position: chr1:74919768-74919932 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 99

Conread position: 251-394
Cow position: chr1:49082948-49082805 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 59, 92

Conread position: 252-395
Cow position: chr1:33080607-33080751 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 72

Conread position: 252-406
Cow position: chr1:76518626-76518470 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 58, 83

Conread position: 252-407
Cow position: chr1:47886278-47886433 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 129
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 8, 71

Conread position: 252-407
Cow position: chr1:96081679-96081527 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 129, 32

Conread position: 253-396
Cow position: chr1:78029826-78029972 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 253-406
Cow position: chr1:69411495-69411649 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 127
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 57, 40

Conread position: 253-407
Cow position: chr1:34160028-34159882 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 141, 57

Conread position: 253-407
Cow position: chr1:57089476-57089632 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 9, 93

Conread position: 253-407
Cow position: chr1:65639123-65638958 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 116

Conread position: 253-407
Cow position: chr1:84787460-84787317 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 147, 38

Conread position: 255-396
Cow position: chr1:45019608-45019741 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 109, 65

Conread position: 257-385
Cow position: chr1:66693705-66693830 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 51, 22

Conread position: 258-370
Cow position: chr1:67585746-67585634 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 51, 87

Conread position: 258-394
Cow position: chr1:500371-500237 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 71, 0

Conread position: 258-396
Cow position: chr1:74304884-74305022 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 64

Conread position: 258-397
Cow position: chr1:93744041-93743898 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 258-398
Cow position: chr1:100152479-100152336 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 137

Conread position: 258-399
Cow position: chr1:759217-759361 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 258-399
Cow position: chr1:7453109-7452966 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 68, 131

Conread position: 258-399
Cow position: chr1:11107442-11107301 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 51, 74

Conread position: 258-399
Cow position: chr1:28563366-28563512 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 258-399
Cow position: chr1:37726219-37726363 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 52

Conread position: 258-399
Cow position: chr1:42592090-42592229 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 64

Conread position: 258-399
Cow position: chr1:55357094-55357238 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 258-399
Cow position: chr1:68710479-68710335 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 258-399
Cow position: chr1:70416565-70416703 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 52, 65

Conread position: 258-399
Cow position: chr1:73551307-73551453 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 258-399
Cow position: chr1:73719666-73719518 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 258-399
Cow position: chr1:87149621-87149758 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 71, 0

Conread position: 258-399
Cow position: chr1:100800574-100800711 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 258-400
Cow position: chr1:25383864-25383724 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 65

Conread position: 258-400
Cow position: chr1:50854108-50853964 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 258-405
Cow position: chr1:51860369-51860512 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 123
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 52, 64

Conread position: 258-406
Cow position: chr1:20667555-20667694 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 139, 20

Conread position: 258-406
Cow position: chr1:40284454-40284591 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 142, 53

Conread position: 258-406
Cow position: chr1:47658543-47658393 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 86

Conread position: 258-406
Cow position: chr1:61846353-61846192 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 258-406
Cow position: chr1:64803902-64804054 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 51, 0

Conread position: 258-406
Cow position: chr1:86056883-86057024 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 258-407
Cow position: chr1:628163-628013 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 85

Conread position: 258-407
Cow position: chr1:6731374-6731227 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 123
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 52, 65

Conread position: 258-407
Cow position: chr1:6790969-6790820 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 64

Conread position: 258-407
Cow position: chr1:8287435-8287583 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 52, 64

Conread position: 258-407
Cow position: chr1:19599165-19599314 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 72

Conread position: 258-407
Cow position: chr1:20125990-20125839 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 125
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 52, 114

Conread position: 258-407
Cow position: chr1:22192965-22192816 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 72, 52

Conread position: 258-407
Cow position: chr1:29671025-29671177 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 21

Conread position: 258-407
Cow position: chr1:43352458-43352609 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 142, 0

Conread position: 258-407
Cow position: chr1:47966825-47966976 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 50, 86

Conread position: 258-407
Cow position: chr1:65318772-65318622 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 124
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 52, 65

Conread position: 258-407
Cow position: chr1:68730199-68730047 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 52, 88

Conread position: 258-407
Cow position: chr1:77739919-77739769 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 139, 98

Conread position: 258-407
Cow position: chr1:79719003-79718854 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 52, 86

Conread position: 258-407
Cow position: chr1:81858706-81858853 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 139, 51

Conread position: 258-407
Cow position: chr1:90267919-90267767 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 50, 87

Conread position: 258-407
Cow position: chr1:95049670-95049819 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 139, 24

Conread position: 258-407
Cow position: chr1:100474434-100474281 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 52, 0

Conread position: 258-407
Cow position: chr1:100513092-100512942 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 52, 85

Conread position: 259-392
Cow position: chr1:64706096-64705963 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 259-399
Cow position: chr1:1605937-1606079 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 259-399
Cow position: chr1:24777790-24777936 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 52, 132

Conread position: 259-399
Cow position: chr1:76612938-76613078 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 259-399
Cow position: chr1:95618835-95618699 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 76

Conread position: 259-399
Cow position: chr1:102797806-102797941 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 49, 21

Conread position: 259-405
Cow position: chr1:69442321-69442469 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 51, 76

Conread position: 259-405
Cow position: chr1:71350530-71350678 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 50, 63

Conread position: 259-405
Cow position: chr1:95809749-95809600 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 259-406
Cow position: chr1:102648474-102648326 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 57, 51

Conread position: 259-407
Cow position: chr1:852367-852217 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 51, 64

Conread position: 259-407
Cow position: chr1:6590231-6590080 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 51, 65

Conread position: 259-407
Cow position: chr1:23633733-23633883 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 51, 64

Conread position: 259-407
Cow position: chr1:33206680-33206833 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 259-407
Cow position: chr1:46795950-46795805 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 23

Conread position: 259-407
Cow position: chr1:46939683-46939838 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 259-407
Cow position: chr1:60045181-60045032 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 51, 62

Conread position: 259-407
Cow position: chr1:73721558-73721407 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 72

Conread position: 260-381
Cow position: chr1:72650368-72650490 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 49, 75

Conread position: 260-394
Cow position: chr1:91065964-91066090 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 260-396
Cow position: chr1:67743545-67743676 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 115
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 50, 62

Conread position: 260-399
Cow position: chr1:25735061-25734924 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 49, 28

Conread position: 260-399
Cow position: chr1:56477778-56477649 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 260-399
Cow position: chr1:72813810-72813673 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 117
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 50, 35

Conread position: 260-399
Cow position: chr1:78793810-78793945 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 260-399
Cow position: chr1:100741475-100741335 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 260-404
Cow position: chr1:1799225-1799083 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 49, 63

Conread position: 260-406
Cow position: chr1:362948-362799 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 50, 13

Conread position: 260-406
Cow position: chr1:99629355-99629212 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 121
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 75

Conread position: 260-407
Cow position: chr1:6941659-6941515 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 140, 50

Conread position: 260-407
Cow position: chr1:6959072-6958928 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 141, 50

Conread position: 260-407
Cow position: chr1:11729365-11729222 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 6, 59

Conread position: 260-407
Cow position: chr1:34856432-34856581 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 62

Conread position: 260-407
Cow position: chr1:40181428-40181578 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 75

Conread position: 260-407
Cow position: chr1:61134608-61134459 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 140, 0

Conread position: 260-407
Cow position: chr1:69691519-69691668 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 42, 84

Conread position: 261-399
Cow position: chr1:22394481-22394618 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 82

Conread position: 261-407
Cow position: chr1:88360077-88359925 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 49, 0

Conread position: 262-399
Cow position: chr1:1802361-1802224 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 48, 81

Conread position: 262-399
Cow position: chr1:22943837-22943971 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 60

Conread position: 262-407
Cow position: chr1:23373052-23372906 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 77, 48

Conread position: 262-407
Cow position: chr1:99609558-99609415 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 138, 68

Conread position: 262-407
Cow position: chr1:101525729-101525878 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 264-407
Cow position: chr1:2975800-2975947 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 264-407
Cow position: chr1:21954038-21954174 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 46, 59

Conread position: 268-407
Cow position: chr1:49980893-49980757 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 133, 51

Conread position: 271-407
Cow position: chr1:22461057-22461191 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 129, 39

Conread position: 285-399
Cow position: chr1:54645600-54645484 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 40

Show alignments to all cow chromosomes.