Cow genome map
| Conread name: | rtes18_h15r1.y1 |
| Conread position: | 177-407 |
| Cow position: | chr21:18495546-18495326 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 223, 19 |
| Conread position: | 214-388 |
| Cow position: | chr21:26828669-26828848 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 113 |
| Conread position: | 214-396 |
| Cow position: | chr21:39845895-39845711 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 95, 13 |
| Conread position: | 215-407 |
| Cow position: | chr21:46809473-46809661 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 94, 30 |
| Conread position: | 216-406 |
| Cow position: | chr21:27863226-27863407 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 93, 8 |
| Conread position: | 216-407 |
| Cow position: | chr21:40475796-40475603 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 38, 28 |
| Conread position: | 217-399 |
| Cow position: | chr21:10004584-10004771 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 27, 110 |
| Conread position: | 217-407 |
| Cow position: | chr21:15305001-15305194 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 91, 128 |
| Conread position: | 218-407 |
| Cow position: | chr21:29418866-29418673 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 20, 11 |
| Conread position: | 222-379 |
| Cow position: | chr21:41829088-41829246 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 38, 19 |
| Conread position: | 224-407 |
| Cow position: | chr21:13226004-13225820 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 86, 75 |
| Conread position: | 224-407 |
| Cow position: | chr21:29011685-29011865 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 33, 20 |
| Conread position: | 226-385 |
| Cow position: | chr21:34209729-34209887 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 82, 63 |
| Conread position: | 226-390 |
| Cow position: | chr21:27711948-27712113 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 28, 110 |
| Conread position: | 226-399 |
| Cow position: | chr21:44251553-44251728 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 9, 56 |
| Conread position: | 227-395 |
| Cow position: | chr21:30938381-30938547 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 27, 91 |
| Conread position: | 228-397 |
| Cow position: | chr21:9873604-9873438 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 44 |
| Conread position: | 228-399 |
| Cow position: | chr21:24757219-24757055 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 228-407 |
| Cow position: | chr21:3379471-3379647 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 65, 30 |
| Conread position: | 228-407 |
| Cow position: | chr21:27744312-27744130 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 82, 119 |
| Conread position: | 228-407 |
| Cow position: | chr21:28919248-28919418 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 26, 10 |
| Conread position: | 229-381 |
| Cow position: | chr21:44724098-44724240 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 229-389 |
| Cow position: | chr21:40089483-40089643 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 25 |
| Conread position: | 229-396 |
| Cow position: | chr21:41974085-41974260 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 229-399 |
| Cow position: | chr21:2787520-2787681 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 81, 18 |
| Conread position: | 229-399 |
| Cow position: | chr21:14464869-14464698 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 13, 115 |
| Conread position: | 229-399 |
| Cow position: | chr21:18450036-18449867 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 107, 15 |
| Conread position: | 229-399 |
| Cow position: | chr21:44829477-44829644 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 80, 23 |
| Conread position: | 229-405 |
| Cow position: | chr21:40266410-40266228 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 229-407 |
| Cow position: | chr21:12349048-12348870 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 79, 21 |
| Conread position: | 229-407 |
| Cow position: | chr21:22718504-22718678 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 79, 23 |
| Conread position: | 229-407 |
| Cow position: | chr21:25345147-25344966 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 25, 115 |
| Conread position: | 229-407 |
| Cow position: | chr21:39319126-39319305 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 35, 52 |
| Conread position: | 229-407 |
| Cow position: | chr21:41610457-41610272 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 105, 9 |
| Conread position: | 230-380 |
| Cow position: | chr21:34737443-34737293 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 24, 66 |
| Conread position: | 230-399 |
| Cow position: | chr21:24296489-24296653 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 78, 14 |
| Conread position: | 230-405 |
| Cow position: | chr21:1464624-1464450 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 7, 15 |
| Conread position: | 230-405 |
| Cow position: | chr21:31658875-31659044 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 170, 8 |
| Conread position: | 230-407 |
| Cow position: | chr21:745446-745280 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 78, 14 |
| Conread position: | 230-407 |
| Cow position: | chr21:938305-938124 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 30, 123 |
| Conread position: | 230-407 |
| Cow position: | chr21:22720849-22720677 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 24, 124 |
| Conread position: | 231-399 |
| Cow position: | chr21:16498794-16498631 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 79, 27 |
| Conread position: | 231-405 |
| Cow position: | chr21:10264312-10264140 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 79, 14 |
| Conread position: | 231-407 |
| Cow position: | chr21:49699755-49699935 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 16, 115 |
| Conread position: | 232-368 |
| Cow position: | chr21:31278468-31278331 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 112 |
| Conread position: | 232-394 |
| Cow position: | chr21:58722-58562 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 40, 17 |
| Conread position: | 232-399 |
| Cow position: | chr21:41738187-41738023 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 51, 55 |
| Conread position: | 232-407 |
| Cow position: | chr21:8430817-8430995 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 23, 104 |
| Conread position: | 232-407 |
| Cow position: | chr21:42455138-42454965 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 22, 79 |
| Conread position: | 233-399 |
| Cow position: | chr21:9278810-9278640 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 233-399 |
| Cow position: | chr21:13584778-13584946 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 77, 14 |
| Conread position: | 234-374 |
| Cow position: | chr21:5489032-5488889 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 12, 113 |
| Conread position: | 234-407 |
| Cow position: | chr21:32272210-32272025 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 235-399 |
| Cow position: | chr21:32647911-32648074 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 72, 20 |
| Conread position: | 235-407 |
| Cow position: | chr21:36763340-36763166 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 27, 12 |
| Conread position: | 236-399 |
| Cow position: | chr21:5345157-5344993 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 18, 75 |
| Conread position: | 238-391 |
| Cow position: | chr21:24351125-24350970 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 8, 13 |
| Conread position: | 238-399 |
| Cow position: | chr21:12473785-12473945 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 17, 76 |
| Conread position: | 238-407 |
| Cow position: | chr21:17184194-17184022 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 238-407 |
| Cow position: | chr21:18341493-18341324 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 16, 34 |
| Conread position: | 239-383 |
| Cow position: | chr21:30359077-30359216 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 72 |
| Conread position: | 239-407 |
| Cow position: | chr21:8986298-8986126 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 239-407 |
| Cow position: | chr21:27521069-27521234 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 13, 29 |
| Conread position: | 239-407 |
| Cow position: | chr21:32339471-32339635 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 27, 13 |
| Conread position: | 239-407 |
| Cow position: | chr21:38482655-38482484 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 13, 82 |
| Conread position: | 241-399 |
| Cow position: | chr21:20318793-20318625 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 241-402 |
| Cow position: | chr21:42920730-42920894 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 241-406 |
| Cow position: | chr21:34002-33825 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 70, 17 |
| Conread position: | 242-394 |
| Cow position: | chr21:42501324-42501170 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 18, 96 |
| Conread position: | 242-399 |
| Cow position: | chr21:27677755-27677595 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 18, 105 |
| Conread position: | 242-406 |
| Cow position: | chr21:868649-868818 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 7, 95 |
| Conread position: | 243-385 |
| Cow position: | chr21:32392796-32392938 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 66, 16 |
| Conread position: | 244-389 |
| Cow position: | chr21:48242780-48242931 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 244-393 |
| Cow position: | chr21:16099290-16099444 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 244-398 |
| Cow position: | chr21:13134867-13134716 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 18, 40 |
| Conread position: | 244-399 |
| Cow position: | chr21:5218974-5218824 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 65, 8 |
| Conread position: | 244-407 |
| Cow position: | chr21:4109044-4108880 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 67, 98 |
| Conread position: | 244-407 |
| Cow position: | chr21:16797122-16796956 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 16, 38 |
| Conread position: | 244-407 |
| Cow position: | chr21:30977001-30977151 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 91, 66 |
| Conread position: | 246-389 |
| Cow position: | chr21:29658539-29658400 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 63, 93 |
| Conread position: | 246-399 |
| Cow position: | chr21:15444817-15444970 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 62, 76 |
| Conread position: | 246-399 |
| Cow position: | chr21:19339965-19340117 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 63, 78 |
| Conread position: | 247-379 |
| Cow position: | chr21:42227434-42227564 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 61, 5 |
| Conread position: | 247-407 |
| Cow position: | chr21:8545756-8545918 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 247-407 |
| Cow position: | chr21:17252713-17252874 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 62, 74 |
| Conread position: | 247-407 |
| Cow position: | chr21:40291485-40291642 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 63, 84 |
| Conread position: | 249-405 |
| Cow position: | chr21:8713692-8713853 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 98 |
| Conread position: | 250-394 |
| Cow position: | chr21:1511547-1511409 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 250-407 |
| Cow position: | chr21:29069063-29069221 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 150, 8 |
| Conread position: | 253-396 |
| Cow position: | chr21:16119904-16120043 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 253-407 |
| Cow position: | chr21:12739346-12739185 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 56, 123 |
| Conread position: | 255-407 |
| Cow position: | chr21:14746028-14745874 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 55, 88 |
| Conread position: | 257-407 |
| Cow position: | chr21:47301-47145 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 257-407 |
| Cow position: | chr21:37706158-37706310 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 53, 65 |
| Conread position: | 258-393 |
| Cow position: | chr21:37014172-37014305 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 49, 76 |
| Conread position: | 258-396 |
| Cow position: | chr21:28244720-28244588 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 52, 64 |
| Conread position: | 258-396 |
| Cow position: | chr21:28882436-28882299 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 52, 64 |
| Conread position: | 258-396 |
| Cow position: | chr21:40916734-40916601 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 63 |
| Conread position: | 258-398 |
| Cow position: | chr21:17193495-17193633 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 258-399 |
| Cow position: | chr21:3585111-3585253 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 52, 76 |
| Conread position: | 258-399 |
| Cow position: | chr21:6051758-6051618 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 18, 65 |
| Conread position: | 258-399 |
| Cow position: | chr21:17890556-17890417 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 51, 65 |
| Conread position: | 258-399 |
| Cow position: | chr21:37495691-37495829 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 258-399 |
| Cow position: | chr21:38943355-38943493 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 93, 47 |
| Conread position: | 258-400 |
| Cow position: | chr21:23672998-23672859 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 258-405 |
| Cow position: | chr21:48482277-48482423 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 139, 52 |
| Conread position: | 258-406 |
| Cow position: | chr21:42145072-42144929 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 139, 44 |
| Conread position: | 258-407 |
| Cow position: | chr21:3135615-3135764 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 52, 24 |
| Conread position: | 258-407 |
| Cow position: | chr21:6292002-6291851 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 52, 74 |
| Conread position: | 258-407 |
| Cow position: | chr21:11353317-11353165 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 11, 86 |
| Conread position: | 258-407 |
| Cow position: | chr21:11779285-11779436 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 52, 74 |
| Conread position: | 258-407 |
| Cow position: | chr21:20160931-20160781 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 52, 23 |
| Conread position: | 258-407 |
| Cow position: | chr21:20213518-20213672 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 258-407 |
| Cow position: | chr21:23535966-23535814 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 29, 87 |
| Conread position: | 258-407 |
| Cow position: | chr21:23587125-23586987 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 143, 52 |
| Conread position: | 258-407 |
| Cow position: | chr21:30835619-30835468 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 258-407 |
| Cow position: | chr21:30970188-30970040 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 52, 32 |
| Conread position: | 258-407 |
| Cow position: | chr21:32536644-32536501 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 51, 64 |
| Conread position: | 258-407 |
| Cow position: | chr21:38720502-38720355 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 52, 42 |
| Conread position: | 258-407 |
| Cow position: | chr21:39810313-39810163 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 51, 85 |
| Conread position: | 258-407 |
| Cow position: | chr21:41041201-41041049 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 52, 90 |
| Conread position: | 258-407 |
| Cow position: | chr21:43655955-43655807 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 52, 64 |
| Conread position: | 258-407 |
| Cow position: | chr21:47464866-47465013 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 64 |
| Conread position: | 259-389 |
| Cow position: | chr21:40571219-40571341 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 259-394 |
| Cow position: | chr21:24797907-24797774 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 51, 63 |
| Conread position: | 259-399 |
| Cow position: | chr21:6042041-6041899 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 259-399 |
| Cow position: | chr21:13589014-13588875 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 50, 85 |
| Conread position: | 259-399 |
| Cow position: | chr21:45651209-45651345 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 59, 23 |
| Conread position: | 259-399 |
| Cow position: | chr21:47713755-47713893 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 50, 71 |
| Conread position: | 259-405 |
| Cow position: | chr21:2536884-2537032 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 51, 72 |
| Conread position: | 259-405 |
| Cow position: | chr21:30231444-30231587 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 51, 76 |
| Conread position: | 259-407 |
| Cow position: | chr21:11006516-11006666 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 50, 85 |
| Conread position: | 259-407 |
| Cow position: | chr21:16152692-16152546 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 141, 62 |
| Conread position: | 259-407 |
| Cow position: | chr21:45970927-45971069 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 138, 51 |
| Conread position: | 260-381 |
| Cow position: | chr21:20185498-20185381 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 50, 42 |
| Conread position: | 260-385 |
| Cow position: | chr21:42441881-42441756 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 50, 83 |
| Conread position: | 260-396 |
| Cow position: | chr21:28237448-28237590 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 260-396 |
| Cow position: | chr21:45537441-45537302 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 10, 85 |
| Conread position: | 260-399 |
| Cow position: | chr21:6998192-6998062 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 260-399 |
| Cow position: | chr21:8351043-8351178 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 50, 60 |
| Conread position: | 260-399 |
| Cow position: | chr21:31258720-31258581 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 50, 83 |
| Conread position: | 260-407 |
| Cow position: | chr21:24266310-24266461 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 260-407 |
| Cow position: | chr21:42017350-42017498 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 50, 35 |
| Conread position: | 260-407 |
| Cow position: | chr21:42355892-42355735 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 261-385 |
| Cow position: | chr21:47784845-47784721 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 83 |
| Conread position: | 261-396 |
| Cow position: | chr21:45446788-45446652 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 49, 84 |
| Conread position: | 261-399 |
| Cow position: | chr21:6713274-6713408 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 49, 70 |
| Conread position: | 261-407 |
| Cow position: | chr21:18568387-18568534 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 49, 61 |
| Conread position: | 261-407 |
| Cow position: | chr21:27810642-27810492 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 262-399 |
| Cow position: | chr21:3360767-3360900 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 48, 60 |
| Conread position: | 262-407 |
| Cow position: | chr21:41917990-41918135 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 48, 32 |
| Conread position: | 263-399 |
| Cow position: | chr21:10410471-10410337 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 263-407 |
| Cow position: | chr21:5214600-5214453 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 47, 81 |
| Conread position: | 267-406 |
| Cow position: | chr21:7424769-7424908 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 133, 74 |
| Conread position: | 274-407 |
| Cow position: | chr21:42905158-42905293 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 61, 36 |
Show alignments to all cow chromosomes.