Cow genome map

Conread name: rtes18_h15r1.y1

Conread position: 190-399
Cow position:
Alignm length: 213
Alignm identity: 150
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 64, 48

Conread position: 208-393
Cow position:
Alignm length: 190
Alignm identity: 140
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 26, 7

Conread position: 209-407
Cow position:
Alignm length: 199
Alignm identity: 143
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 213-405
Cow position:
Alignm length: 204
Alignm identity: 145
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 38, 160

Conread position: 214-407
Cow position:
Alignm length: 204
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 74

Conread position: 217-396
Cow position:
Alignm length: 183
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 9

Conread position: 219-397
Cow position:
Alignm length: 181
Alignm identity: 134
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 22, 62

Conread position: 225-407
Cow position:
Alignm length: 187
Alignm identity: 144
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 84, 19

Conread position: 225-407
Cow position:
Alignm length: 187
Alignm identity: 140
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 83, 13

Conread position: 227-406
Cow position:
Alignm length: 182
Alignm identity: 139
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 173, 11

Conread position: 228-399
Cow position:
Alignm length: 176
Alignm identity: 125
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 11, 19

Conread position: 228-406
Cow position:
Alignm length: 183
Alignm identity: 138
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 81, 24

Conread position: 228-407
Cow position:
Alignm length: 184
Alignm identity: 134
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 82, 30

Conread position: 228-407
Cow position:
Alignm length: 185
Alignm identity: 139
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 26, 52

Conread position: 228-407
Cow position:
Alignm length: 181
Alignm identity: 129
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 106, 24

Conread position: 228-407
Cow position:
Alignm length: 185
Alignm identity: 137
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 32, 21

Conread position: 228-407
Cow position:
Alignm length: 185
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 95

Conread position: 229-396
Cow position:
Alignm length: 177
Alignm identity: 137
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 16, 0

Conread position: 229-396
Cow position:
Alignm length: 175
Alignm identity: 126
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 78, 15

Conread position: 229-399
Cow position:
Alignm length: 177
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 119

Conread position: 229-400
Cow position:
Alignm length: 175
Alignm identity: 134
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 25, 21

Conread position: 229-400
Cow position:
Alignm length: 174
Alignm identity: 129
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 80, 9

Conread position: 229-403
Cow position:
Alignm length: 182
Alignm identity: 131
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 79, 24

Conread position: 229-406
Cow position:
Alignm length: 181
Alignm identity: 132
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 12, 24

Conread position: 229-407
Cow position:
Alignm length: 182
Alignm identity: 135
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 27, 82

Conread position: 229-407
Cow position:
Alignm length: 190
Alignm identity: 141
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 229-407
Cow position:
Alignm length: 184
Alignm identity: 142
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 13, 24

Conread position: 229-407
Cow position:
Alignm length: 186
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 18

Conread position: 230-399
Cow position:
Alignm length: 172
Alignm identity: 125
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 80, 22

Conread position: 232-396
Cow position:
Alignm length: 168
Alignm identity: 125
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 22, 48

Conread position: 232-399
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 22, 90

Conread position: 232-399
Cow position:
Alignm length: 170
Alignm identity: 125
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 78, 14

Conread position: 232-406
Cow position:
Alignm length: 184
Alignm identity: 142
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 14, 117

Conread position: 232-406
Cow position:
Alignm length: 181
Alignm identity: 131
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 27, 112

Conread position: 232-407
Cow position:
Alignm length: 178
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 168, 20

Conread position: 232-407
Cow position:
Alignm length: 183
Alignm identity: 138
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 28, 20

Conread position: 232-407
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 27, 0

Conread position: 233-396
Cow position:
Alignm length: 174
Alignm identity: 134
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 15, 64

Conread position: 233-396
Cow position:
Alignm length: 166
Alignm identity: 118
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 77, 11

Conread position: 233-399
Cow position:
Alignm length: 167
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 233-400
Cow position:
Alignm length: 171
Alignm identity: 131
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 29, 0

Conread position: 233-405
Cow position:
Alignm length: 186
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 30

Conread position: 233-406
Cow position:
Alignm length: 183
Alignm identity: 141
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 17, 107

Conread position: 233-407
Cow position:
Alignm length: 178
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 50

Conread position: 234-399
Cow position:
Alignm length: 168
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 75, 16

Conread position: 234-404
Cow position:
Alignm length: 174
Alignm identity: 134
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 20, 90

Conread position: 234-406
Cow position:
Alignm length: 178
Alignm identity: 136
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 20, 102

Conread position: 234-407
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 22, 97

Conread position: 238-380
Cow position:
Alignm length: 145
Alignm identity: 110
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 72, 12

Conread position: 239-399
Cow position:
Alignm length: 164
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 63

Conread position: 239-399
Cow position:
Alignm length: 164
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 239-399
Cow position:
Alignm length: 164
Alignm identity: 126
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 15, 83

Conread position: 239-405
Cow position:
Alignm length: 175
Alignm identity: 139
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 21, 13

Conread position: 240-407
Cow position:
Alignm length: 173
Alignm identity: 132
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 19, 71

Conread position: 240-407
Cow position:
Alignm length: 174
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 59

Conread position: 241-350
Cow position:
Alignm length: 112
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 91

Conread position: 242-396
Cow position:
Alignm length: 156
Alignm identity: 114
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 43, 79

Conread position: 242-401
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 69

Conread position: 242-406
Cow position:
Alignm length: 169
Alignm identity: 132
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 66, 79

Conread position: 243-407
Cow position:
Alignm length: 169
Alignm identity: 120
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 67, 115

Conread position: 244-389
Cow position:
Alignm length: 147
Alignm identity: 110
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 123, 23

Conread position: 244-389
Cow position:
Alignm length: 149
Alignm identity: 116
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 11, 92

Conread position: 244-389
Cow position:
Alignm length: 148
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 66, 77

Conread position: 244-396
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 66, 11

Conread position: 244-399
Cow position:
Alignm length: 158
Alignm identity: 124
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 66, 11

Conread position: 244-407
Cow position:
Alignm length: 171
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 67

Conread position: 244-407
Cow position:
Alignm length: 168
Alignm identity: 130
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 66, 44

Conread position: 244-407
Cow position:
Alignm length: 176
Alignm identity: 136
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 244-407
Cow position:
Alignm length: 168
Alignm identity: 122
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 66, 78

Conread position: 245-399
Cow position:
Alignm length: 155
Alignm identity: 110
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 246-395
Cow position:
Alignm length: 152
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 112

Conread position: 246-399
Cow position:
Alignm length: 156
Alignm identity: 115
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 61, 98

Conread position: 246-407
Cow position:
Alignm length: 166
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 62, 12

Conread position: 247-407
Cow position:
Alignm length: 163
Alignm identity: 129
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 153, 11

Conread position: 248-399
Cow position:
Alignm length: 153
Alignm identity: 119
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 18, 14

Conread position: 252-382
Cow position:
Alignm length: 131
Alignm identity: 103
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 252-407
Cow position:
Alignm length: 159
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 7

Conread position: 253-407
Cow position:
Alignm length: 165
Alignm identity: 128
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 254-399
Cow position:
Alignm length: 148
Alignm identity: 117
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 54, 90

Conread position: 258-391
Cow position:
Alignm length: 136
Alignm identity: 107
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 52, 77

Conread position: 258-396
Cow position:
Alignm length: 141
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 86

Conread position: 258-396
Cow position:
Alignm length: 141
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 69

Conread position: 258-396
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 91

Conread position: 258-399
Cow position:
Alignm length: 144
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 65

Conread position: 258-399
Cow position:
Alignm length: 144
Alignm identity: 118
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 51, 69

Conread position: 258-399
Cow position:
Alignm length: 144
Alignm identity: 107
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 52, 100

Conread position: 258-399
Cow position:
Alignm length: 144
Alignm identity: 111
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 52, 63

Conread position: 258-399
Cow position:
Alignm length: 147
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 258-399
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 37

Conread position: 258-399
Cow position:
Alignm length: 142
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 258-399
Cow position:
Alignm length: 150
Alignm identity: 116
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 52, 112

Conread position: 258-399
Cow position:
Alignm length: 144
Alignm identity: 116
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 52, 10

Conread position: 258-399
Cow position:
Alignm length: 142
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 258-402
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 52, 21

Conread position: 258-404
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 258-405
Cow position:
Alignm length: 154
Alignm identity: 121
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 28, 85

Conread position: 258-406
Cow position:
Alignm length: 153
Alignm identity: 122
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 52, 85

Conread position: 258-406
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 47, 24

Conread position: 258-407
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 76, 51

Conread position: 258-407
Cow position:
Alignm length: 154
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 42

Conread position: 258-407
Cow position:
Alignm length: 158
Alignm identity: 123
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 46, 76

Conread position: 258-407
Cow position:
Alignm length: 153
Alignm identity: 115
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 99, 62

Conread position: 259-396
Cow position:
Alignm length: 138
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 259-399
Cow position:
Alignm length: 145
Alignm identity: 113
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 49, 0

Conread position: 259-407
Cow position:
Alignm length: 151
Alignm identity: 119
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 141, 12

Conread position: 260-396
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 50, 83

Conread position: 260-399
Cow position:
Alignm length: 144
Alignm identity: 112
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 260-407
Cow position:
Alignm length: 152
Alignm identity: 115
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 50, 22

Conread position: 260-407
Cow position:
Alignm length: 152
Alignm identity: 122
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 47, 84

Conread position: 260-407
Cow position:
Alignm length: 152
Alignm identity: 115
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 50, 63

Conread position: 260-407
Cow position:
Alignm length: 152
Alignm identity: 121
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 50, 62

Conread position: 261-399
Cow position:
Alignm length: 141
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 56

Conread position: 262-407
Cow position:
Alignm length: 152
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 32

Conread position: 262-407
Cow position:
Alignm length: 148
Alignm identity: 113
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 138, 71

Conread position: 267-365
Cow position:
Alignm length: 101
Alignm identity: 85
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 43, 68

Conread position: 269-399
Cow position:
Alignm length: 133
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 40, 74

Conread position: 280-396
Cow position:
Alignm length: 119
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 30, 42

Conread position: 285-407
Cow position:
Alignm length: 131
Alignm identity: 103
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 26, 0

Show alignments to all cow chromosomes.