Cow genome map

Conread name: rtes18_h15r1.y1

Conread position: 214-405
Cow position: chr25:22373254-22373449 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 18, 132

Conread position: 214-405
Cow position: chr25:33272864-33272674 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 95, 7

Conread position: 214-407
Cow position: chr25:15999322-15999513 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 15, 7

Conread position: 215-407
Cow position: chr25:30817125-30816928 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 216-399
Cow position: chr25:35564153-35563975 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 82, 31

Conread position: 216-400
Cow position: chr25:12098073-12097883 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 16, 136

Conread position: 216-406
Cow position: chr25:14216038-14215830 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 29, 11

Conread position: 223-407
Cow position: chr25:2662623-2662435 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 11, 94

Conread position: 226-407
Cow position: chr25:7726879-7726701 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 83, 21

Conread position: 227-394
Cow position: chr25:22642492-22642318 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 227-399
Cow position: chr25:25716862-25716695 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 82, 29

Conread position: 228-407
Cow position: chr25:18491254-18491077 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 20, 32

Conread position: 229-396
Cow position: chr25:12807256-12807090 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 81, 15

Conread position: 229-399
Cow position: chr25:7185059-7185227 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 80, 15

Conread position: 229-399
Cow position: chr25:17141318-17141151 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 80, 29

Conread position: 229-399
Cow position: chr25:18156071-18156237 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 132, 55

Conread position: 229-399
Cow position: chr25:22154250-22154073 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 229-399
Cow position: chr25:30709130-30709299 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 120
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 229-405
Cow position: chr25:17119959-17119783 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 15

Conread position: 229-407
Cow position: chr25:3141718-3141542 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 25, 43

Conread position: 229-407
Cow position: chr25:7311173-7311357 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 229-407
Cow position: chr25:26989417-26989236 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 101, 0

Conread position: 230-407
Cow position: chr25:1838460-1838280 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 17, 103

Conread position: 230-407
Cow position: chr25:8410818-8410995 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 170, 90

Conread position: 230-407
Cow position: chr25:9494929-9494744 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 20, 110

Conread position: 230-407
Cow position: chr25:9640814-9640998 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 27, 110

Conread position: 230-407
Cow position: chr25:11585743-11585557 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 80, 29

Conread position: 230-407
Cow position: chr25:14944910-14945089 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 45

Conread position: 230-407
Cow position: chr25:22348244-22348424 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 79, 28

Conread position: 231-391
Cow position: chr25:35762801-35762644 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 231-400
Cow position: chr25:24115099-24115268 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 21

Conread position: 231-406
Cow position: chr25:26087735-26087559 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 92

Conread position: 231-407
Cow position: chr25:18551116-18551295 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 28, 107

Conread position: 232-388
Cow position: chr25:7864543-7864393 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 232-396
Cow position: chr25:30319232-30319402 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 19, 12

Conread position: 233-407
Cow position: chr25:18201716-18201890 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 21, 50

Conread position: 233-407
Cow position: chr25:31926169-31926338 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 27, 80

Conread position: 234-381
Cow position: chr25:12092833-12092681 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 234-396
Cow position: chr25:22119447-22119605 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 76, 13

Conread position: 234-407
Cow position: chr25:16921583-16921758 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 76, 25

Conread position: 234-407
Cow position: chr25:17919190-17919013 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 10

Conread position: 235-399
Cow position: chr25:35052409-35052573 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 46, 23

Conread position: 238-396
Cow position: chr25:28939929-28940089 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 17, 88

Conread position: 238-403
Cow position: chr25:17724013-17724178 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 119
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 70, 97

Conread position: 238-407
Cow position: chr25:9616046-9615876 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 8, 72

Conread position: 239-399
Cow position: chr25:36370028-36369868 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 13, 82

Conread position: 239-399
Cow position: chr25:36375719-36375559 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 13, 82

Conread position: 242-382
Cow position: chr25:15006481-15006337 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 18, 45

Conread position: 244-388
Cow position: chr25:37648984-37648842 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 78

Conread position: 244-396
Cow position: chr25:17704941-17704796 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 15, 67

Conread position: 244-399
Cow position: chr25:1823887-1824048 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 16, 0

Conread position: 244-399
Cow position: chr25:36872850-36873007 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 12, 91

Conread position: 244-407
Cow position: chr25:33555812-33555646 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 132
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 16, 0

Conread position: 246-407
Cow position: chr25:21547356-21547196 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 62, 84

Conread position: 247-406
Cow position: chr25:37965461-37965297 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 88

Conread position: 252-399
Cow position: chr25:7673500-7673350 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 252-407
Cow position: chr25:21500849-21501007 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 253-399
Cow position: chr25:33100764-33100624 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 57, 69

Conread position: 258-385
Cow position: chr25:6812040-6812172 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 258-395
Cow position: chr25:20008321-20008186 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 116
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 52, 73

Conread position: 258-396
Cow position: chr25:5846618-5846757 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 50, 90

Conread position: 258-399
Cow position: chr25:10504148-10504292 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 52, 0

Conread position: 258-399
Cow position: chr25:26306016-26306155 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 64

Conread position: 258-400
Cow position: chr25:14164385-14164243 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 77, 63

Conread position: 258-405
Cow position: chr25:1763271-1763128 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 51, 64

Conread position: 258-405
Cow position: chr25:14513293-14513156 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 142, 52

Conread position: 258-405
Cow position: chr25:20085765-20085618 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 64

Conread position: 258-406
Cow position: chr25:17658799-17658651 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 131, 62

Conread position: 258-407
Cow position: chr25:432861-433009 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 52, 21

Conread position: 258-407
Cow position: chr25:5808135-5807984 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 51, 86

Conread position: 258-407
Cow position: chr25:7380651-7380800 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 123
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 52, 23

Conread position: 258-407
Cow position: chr25:11857799-11857948 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 52, 63

Conread position: 258-407
Cow position: chr25:11956991-11956843 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 124
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 49, 64

Conread position: 258-407
Cow position: chr25:14225554-14225401 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 258-407
Cow position: chr25:21893521-21893377 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 142, 71

Conread position: 258-407
Cow position: chr25:33311136-33311287 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 52, 77

Conread position: 259-399
Cow position: chr25:28662293-28662159 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 64

Conread position: 259-405
Cow position: chr25:18646766-18646626 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 131, 50

Conread position: 259-407
Cow position: chr25:31514370-31514220 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 51, 84

Conread position: 260-399
Cow position: chr25:13443222-13443361 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 260-407
Cow position: chr25:6473891-6474048 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 262-406
Cow position: chr25:23323680-23323530 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 123
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 48, 0

Conread position: 262-407
Cow position: chr25:7623005-7622858 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 48, 60

Conread position: 264-407
Cow position: chr25:11855366-11855510 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 121
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 46, 71

Conread position: 267-407
Cow position: chr25:447728-447864 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 56

Conread position: 276-406
Cow position: chr25:10138491-10138357 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 278-399
Cow position: chr25:18568047-18568168 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 57

Show alignments to all cow chromosomes.