Cow genome map

Conread name: rtes18_h15r1.y1

Conread position: 174-407
Cow position: chr26:5836531-5836762 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 163
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 41

Conread position: 199-407
Cow position: chr26:6714033-6714244 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 61, 42

Conread position: 206-395
Cow position: chr26:23671679-23671488 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 12, 20

Conread position: 211-407
Cow position: chr26:27768520-27768325 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 16

Conread position: 216-399
Cow position: chr26:4584960-4585145 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 111

Conread position: 216-407
Cow position: chr26:12027985-12028179 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 121

Conread position: 218-399
Cow position: chr26:19446381-19446200 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 42

Conread position: 225-407
Cow position: chr26:16795972-16796152 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 19, 84

Conread position: 226-399
Cow position: chr26:23112277-23112102 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 9, 23

Conread position: 227-399
Cow position: chr26:22348778-22348944 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 11, 0

Conread position: 227-407
Cow position: chr26:11967894-11968078 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 28, 92

Conread position: 228-370
Cow position: chr26:26919773-26919630 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 116

Conread position: 228-399
Cow position: chr26:21320181-21320014 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 16

Conread position: 228-399
Cow position: chr26:28251387-28251224 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 82, 19

Conread position: 228-407
Cow position: chr26:19459934-19459751 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 24

Conread position: 228-407
Cow position: chr26:34026797-34026979 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 26, 108

Conread position: 229-381
Cow position: chr26:32518716-32518557 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 229-399
Cow position: chr26:4807793-4807622 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 25, 117

Conread position: 229-399
Cow position: chr26:10219987-10220160 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 25, 67

Conread position: 229-399
Cow position: chr26:32834342-32834511 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 81, 23

Conread position: 229-399
Cow position: chr26:33475935-33475762 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 229-407
Cow position: chr26:8811366-8811185 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 23, 107

Conread position: 229-407
Cow position: chr26:31711826-31712010 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 26, 97

Conread position: 229-407
Cow position: chr26:33253080-33253258 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 33, 9

Conread position: 230-396
Cow position: chr26:20291461-20291621 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 79, 14

Conread position: 230-400
Cow position: chr26:32830314-32830148 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 80, 22

Conread position: 230-407
Cow position: chr26:28202523-28202701 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 24, 8

Conread position: 231-399
Cow position: chr26:6823391-6823226 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 27, 0

Conread position: 231-399
Cow position: chr26:18679477-18679318 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 22

Conread position: 232-389
Cow position: chr26:23096959-23097116 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 20

Conread position: 232-396
Cow position: chr26:29663922-29664086 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 232-399
Cow position: chr26:9661993-9662164 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 23, 107

Conread position: 232-399
Cow position: chr26:34114493-34114330 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 78, 20

Conread position: 232-406
Cow position: chr26:31173503-31173328 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 78, 27

Conread position: 232-407
Cow position: chr26:830050-829863 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 232-407
Cow position: chr26:32601582-32601408 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 77, 16

Conread position: 233-399
Cow position: chr26:16550217-16550056 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 76, 11

Conread position: 233-399
Cow position: chr26:19146137-19145967 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 115

Conread position: 233-407
Cow position: chr26:16166459-16166637 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 22, 49

Conread position: 235-406
Cow position: chr26:21822819-21822986 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 19, 9

Conread position: 238-402
Cow position: chr26:35530476-35530310 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 24, 14

Conread position: 239-399
Cow position: chr26:13862816-13862969 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 71, 5

Conread position: 239-407
Cow position: chr26:9099308-9099474 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 15, 72

Conread position: 239-407
Cow position: chr26:27482337-27482508 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 15, 97

Conread position: 240-406
Cow position: chr26:2930031-2930200 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 57, 12

Conread position: 241-407
Cow position: chr26:16435428-16435598 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 69, 31

Conread position: 242-407
Cow position: chr26:25526466-25526307 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 66, 15

Conread position: 243-407
Cow position: chr26:5407202-5407037 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 17, 9

Conread position: 244-405
Cow position: chr26:8637970-8637809 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 64, 30

Conread position: 244-407
Cow position: chr26:17398796-17398634 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 41

Conread position: 245-407
Cow position: chr26:16801205-16801038 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 13, 101

Conread position: 247-399
Cow position: chr26:15132856-15132705 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 11

Conread position: 249-407
Cow position: chr26:23623829-23623986 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 60, 72

Conread position: 252-407
Cow position: chr26:5168604-5168451 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 58, 71

Conread position: 252-407
Cow position: chr26:11884501-11884358 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 148, 32

Conread position: 257-407
Cow position: chr26:11800413-11800271 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 258-396
Cow position: chr26:35678054-35677912 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 258-399
Cow position: chr26:7148095-7148237 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 50, 94

Conread position: 258-399
Cow position: chr26:12893224-12893359 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 120
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 52, 64

Conread position: 258-399
Cow position: chr26:20846950-20846813 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 258-399
Cow position: chr26:25029742-25029601 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 52, 85

Conread position: 258-399
Cow position: chr26:31382520-31382388 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 258-406
Cow position: chr26:10764420-10764271 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 50, 86

Conread position: 258-406
Cow position: chr26:11538741-11538591 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 86

Conread position: 258-407
Cow position: chr26:8811680-8811530 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 86

Conread position: 258-407
Cow position: chr26:11672506-11672355 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 142, 0

Conread position: 258-407
Cow position: chr26:12992554-12992402 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 50, 87

Conread position: 258-407
Cow position: chr26:19671683-19671536 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 124
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 51, 85

Conread position: 259-396
Cow position: chr26:32842579-32842716 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 51, 76

Conread position: 259-399
Cow position: chr26:4167145-4167285 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 49, 76

Conread position: 259-399
Cow position: chr26:26407586-26407722 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 51, 62

Conread position: 259-400
Cow position: chr26:28244036-28243896 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 50, 85

Conread position: 259-407
Cow position: chr26:28629-28773 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 51, 64

Conread position: 259-407
Cow position: chr26:1041207-1041057 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 50, 85

Conread position: 260-375
Cow position: chr26:10752499-10752381 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 260-382
Cow position: chr26:31876001-31876123 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 50, 71

Conread position: 260-399
Cow position: chr26:7085557-7085693 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 50, 75

Conread position: 260-407
Cow position: chr26:9501913-9501766 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 24

Conread position: 261-407
Cow position: chr26:31633934-31633786 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 61

Conread position: 262-399
Cow position: chr26:32353520-32353652 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 51, 59

Conread position: 263-407
Cow position: chr26:26244968-26245112 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 66

Show alignments to all cow chromosomes.