Cow genome map

Conread name: rtes36_o11r1.y1

Conread position: 122-312
Cow position: chr1:43148366-43148563 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 34, 0

Conread position: 135-272
Cow position: chr1:49358208-49358073 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 102
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 45, 0

Conread position: 135-312
Cow position: chr1:39417948-39418126 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 76

Conread position: 139-310
Cow position: chr1:24534097-24534267 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 26, 15

Conread position: 139-312
Cow position: chr1:69227285-69227456 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 15

Conread position: 139-312
Cow position: chr1:98512084-98511912 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 22, 32

Conread position: 140-318
Cow position: chr1:89741837-89742021 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 143-309
Cow position: chr1:98576201-98576035 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 133
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 143-312
Cow position: chr1:50992088-50991918 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 143-312
Cow position: chr1:55230131-55229961 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 24, 0

Conread position: 143-312
Cow position: chr1:68672448-68672612 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 111, 0

Conread position: 143-312
Cow position: chr1:69264963-69264795 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 18, 135

Conread position: 143-312
Cow position: chr1:77880579-77880745 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 41, 115

Conread position: 143-312
Cow position: chr1:81580331-81580163 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 103, 0

Conread position: 143-312
Cow position: chr1:95153376-95153208 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 140, 0

Conread position: 143-313
Cow position: chr1:6240129-6240296 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 33

Conread position: 143-319
Cow position: chr1:8670926-8670751 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 40, 21

Conread position: 143-323
Cow position: chr1:33996770-33996950 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 143-368
Cow position: chr1:24791792-24792012 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 178, 0

Conread position: 145-303
Cow position: chr1:6972676-6972520 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 22, 0

Conread position: 149-285
Cow position: chr1:69532374-69532511 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 149-318
Cow position: chr1:74822601-74822426 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 124
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 18, 0

Conread position: 152-319
Cow position: chr1:6826154-6826318 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 17, 32

Conread position: 159-312
Cow position: chr1:64302104-64302259 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 159-334
Cow position: chr1:75383108-75382942 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 155, 37

Conread position: 160-319
Cow position: chr1:38754061-38753901 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 161-319
Cow position: chr1:36875162-36875008 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 97, 0

Conread position: 162-307
Cow position: chr1:83301816-83301962 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 87, 19

Conread position: 163-285
Cow position: chr1:42822405-42822283 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 93
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 163-290
Cow position: chr1:20537340-20537212 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 21, 0

Conread position: 163-304
Cow position: chr1:87197954-87197813 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 163-312
Cow position: chr1:47886346-47886498 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 125, 111

Conread position: 163-313
Cow position: chr1:45873935-45874094 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 12, 0

Conread position: 163-318
Cow position: chr1:66752494-66752650 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 164-312
Cow position: chr1:97696877-97696732 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 86, 0

Conread position: 165-312
Cow position: chr1:42138990-42138843 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 165-312
Cow position: chr1:74081850-74081996 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 120
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 14, 0

Conread position: 166-312
Cow position: chr1:35162542-35162395 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 9, 0

Conread position: 166-312
Cow position: chr1:93554967-93554821 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 168-319
Cow position: chr1:68127061-68127212 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 169-298
Cow position: chr1:43499169-43499297 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 170-312
Cow position: chr1:16060878-16061019 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 14, 0

Conread position: 172-284
Cow position: chr1:32787829-32787941 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 49, 90

Conread position: 172-307
Cow position: chr1:70538736-70538601 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 172-310
Cow position: chr1:6381896-6381759 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 172-312
Cow position: chr1:81481257-81481397 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 172-312
Cow position: chr1:98360279-98360411 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 70, 0

Conread position: 172-315
Cow position: chr1:43311646-43311790 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 46, 0

Conread position: 172-318
Cow position: chr1:45288748-45288892 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 28, 12

Conread position: 173-315
Cow position: chr1:34159960-34159817 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 116
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 62, 0

Conread position: 173-318
Cow position: chr1:40530978-40531121 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 11, 108

Conread position: 174-275
Cow position: chr1:23372981-23372881 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 174-276
Cow position: chr1:53402904-53402802 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 174-282
Cow position: chr1:40181501-40181610 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 174-284
Cow position: chr1:64458088-64457978 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 87
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 174-284
Cow position: chr1:77685858-77685968 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 95
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 174-284
Cow position: chr1:94823269-94823379 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 174-285
Cow position: chr1:54569821-54569710 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 174-287
Cow position: chr1:81638671-81638558 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 99
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 174-288
Cow position: chr1:46100717-46100831 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 98
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 174-290
Cow position: chr1:8353502-8353386 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 174-290
Cow position: chr1:57359585-57359471 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 95, 0

Conread position: 174-291
Cow position: chr1:64706615-64706499 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 174-291
Cow position: chr1:67539682-67539564 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 95, 80

Conread position: 174-292
Cow position: chr1:31630164-31630282 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 174-292
Cow position: chr1:87149692-87149810 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 174-295
Cow position: chr1:97939080-97938959 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 174-296
Cow position: chr1:32014319-32014199 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 106, 0

Conread position: 174-296
Cow position: chr1:81364383-81364261 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 174-297
Cow position: chr1:23633807-23633932 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 94, 0

Conread position: 174-298
Cow position: chr1:92792173-92792051 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 174-299
Cow position: chr1:76518545-76518420 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 174-303
Cow position: chr1:11489036-11489167 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 174-304
Cow position: chr1:52912775-52912904 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 174-304
Cow position: chr1:84103938-84104068 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 174-304
Cow position: chr1:84905940-84906070 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 174-304
Cow position: chr1:89381398-89381268 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 174-304
Cow position: chr1:92603142-92603011 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 110
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 124, 0

Conread position: 174-304
Cow position: chr1:96304846-96304976 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 174-305
Cow position: chr1:42178868-42178737 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 111
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 174-305
Cow position: chr1:76739787-76739917 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 122, 0

Conread position: 174-305
Cow position: chr1:100569279-100569148 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 174-305
Cow position: chr1:101280615-101280742 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 174-306
Cow position: chr1:7793399-7793530 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 80, 0

Conread position: 174-307
Cow position: chr1:22461115-22461248 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 111
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 174-307
Cow position: chr1:95152994-95152861 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 113
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 174-308
Cow position: chr1:759295-759429 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 174-308
Cow position: chr1:45315513-45315647 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 174-308
Cow position: chr1:66898374-66898509 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 174-310
Cow position: chr1:6790894-6790762 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 174-310
Cow position: chr1:24406774-24406910 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 174-310
Cow position: chr1:57420613-57420744 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 174-310
Cow position: chr1:96558726-96558863 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 121, 0

Conread position: 174-311
Cow position: chr1:6854185-6854318 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 174-311
Cow position: chr1:51860438-51860575 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 174-311
Cow position: chr1:54157419-54157280 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 116
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 106, 0

Conread position: 174-311
Cow position: chr1:72068711-72068849 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 119
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 37, 0

Conread position: 174-311
Cow position: chr1:92996768-92996905 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 21

Conread position: 174-311
Cow position: chr1:96019351-96019216 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 174-312
Cow position: chr1:186158-186289 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 174-312
Cow position: chr1:874777-874639 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 174-312
Cow position: chr1:3417478-3417333 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 174-312
Cow position: chr1:3923677-3923815 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 174-312
Cow position: chr1:4391148-4391294 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 174-312
Cow position: chr1:6731303-6731166 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 118
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 125, 0

Conread position: 174-312
Cow position: chr1:7740070-7739933 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 174-312
Cow position: chr1:8347246-8347108 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 117
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 174-312
Cow position: chr1:10778686-10778548 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 174-312
Cow position: chr1:10941972-10942109 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 174-312
Cow position: chr1:11729298-11729160 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 115
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 174-312
Cow position: chr1:11913754-11913894 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 174-312
Cow position: chr1:19304693-19304556 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 122
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 136, 66

Conread position: 174-312
Cow position: chr1:20667620-20667757 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 174-312
Cow position: chr1:22035734-22035597 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 115
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 132, 0

Conread position: 174-312
Cow position: chr1:22824028-22823890 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 119
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 174-312
Cow position: chr1:23512537-23512674 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 41, 0

Conread position: 174-312
Cow position: chr1:30417925-30418056 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 103, 0

Conread position: 174-312
Cow position: chr1:38706732-38706869 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 116
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 7, 0

Conread position: 174-312
Cow position: chr1:42360411-42360271 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 117
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 50, 0

Conread position: 174-312
Cow position: chr1:43352533-43352669 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 113
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 90, 0

Conread position: 174-312
Cow position: chr1:49082866-49082728 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 174-312
Cow position: chr1:49433141-49433279 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 174-312
Cow position: chr1:52052594-52052732 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 174-312
Cow position: chr1:52496893-52496757 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 174-312
Cow position: chr1:52995149-52995009 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 174-312
Cow position: chr1:54258689-54258552 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 117
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 55, 0

Conread position: 174-312
Cow position: chr1:55428833-55428972 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 121
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 105, 0

Conread position: 174-312
Cow position: chr1:58037141-58037004 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 115
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 72, 0

Conread position: 174-312
Cow position: chr1:60987112-60986973 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 100, 0

Conread position: 174-312
Cow position: chr1:63079130-63078995 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 174-312
Cow position: chr1:65103738-65103606 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 174-312
Cow position: chr1:67529178-67529040 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 113
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 174-312
Cow position: chr1:67918880-67918742 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 174-312
Cow position: chr1:68676485-68676346 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 109

Conread position: 174-312
Cow position: chr1:71915997-71916134 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 99, 0

Conread position: 174-312
Cow position: chr1:72813739-72813602 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 117
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 125, 0

Conread position: 174-312
Cow position: chr1:73721484-73721345 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 32, 20

Conread position: 174-312
Cow position: chr1:74928007-74927869 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 115
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 174-312
Cow position: chr1:75250233-75250100 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 101, 0

Conread position: 174-312
Cow position: chr1:76613012-76613150 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 174-312
Cow position: chr1:77739844-77739707 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 118
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 23, 0

Conread position: 174-312
Cow position: chr1:78697649-78697786 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 116, 0

Conread position: 174-312
Cow position: chr1:86340345-86340479 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 115
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 86, 0

Conread position: 174-312
Cow position: chr1:87072818-87072684 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 174-312
Cow position: chr1:95835675-95835813 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 121
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 174-312
Cow position: chr1:98594688-98594558 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 103, 0

Conread position: 174-312
Cow position: chr1:99221233-99221366 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 174-312
Cow position: chr1:99609491-99609356 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 174-312
Cow position: chr1:99642247-99642382 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 7, 0

Conread position: 174-312
Cow position: chr1:100474357-100474219 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 174-312
Cow position: chr1:102349629-102349761 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 19, 0

Conread position: 174-312
Cow position: chr1:102648401-102648263 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 174-314
Cow position: chr1:6031747-6031607 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 174-315
Cow position: chr1:26894849-26894994 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 174-318
Cow position: chr1:3352577-3352719 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 174-318
Cow position: chr1:47402651-47402507 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 100, 49

Conread position: 174-318
Cow position: chr1:73936021-73936166 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 174-318
Cow position: chr1:80422395-80422254 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 134, 84

Conread position: 174-318
Cow position: chr1:84203634-84203493 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 119
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 24, 0

Conread position: 174-318
Cow position: chr1:86579085-86578944 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 83, 0

Conread position: 174-318
Cow position: chr1:87095091-87095235 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 120
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 174-319
Cow position: chr1:6394680-6394535 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 174-319
Cow position: chr1:46245618-46245771 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 87, 46

Conread position: 174-319
Cow position: chr1:53370206-53370063 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 95, 0

Conread position: 174-319
Cow position: chr1:61011304-61011159 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 174-319
Cow position: chr1:91811902-91811760 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 11, 95

Conread position: 174-319
Cow position: chr1:101267881-101268023 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 87, 0

Conread position: 174-320
Cow position: chr1:82880767-82880623 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 120
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 86, 0

Conread position: 174-321
Cow position: chr1:100552098-100551946 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 74, 0

Conread position: 174-323
Cow position: chr1:78067947-78068094 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 174-323
Cow position: chr1:96183862-96184014 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 95, 147

Conread position: 174-324
Cow position: chr1:6941591-6941433 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 94, 0

Conread position: 174-324
Cow position: chr1:6959004-6958846 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 103, 0

Conread position: 174-328
Cow position: chr1:56225907-56225754 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 10, 0

Conread position: 174-334
Cow position: chr1:84768756-84768917 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 150, 0

Conread position: 175-282
Cow position: chr1:63905137-63905244 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 175-291
Cow position: chr1:731851-731970 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 91, 0

Conread position: 175-304
Cow position: chr1:52435394-52435265 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 175-309
Cow position: chr1:4582672-4582538 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 129, 74

Conread position: 175-309
Cow position: chr1:61846266-61846132 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 175-311
Cow position: chr1:8737-8601 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 175-312
Cow position: chr1:4032754-4032617 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 118
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 175-312
Cow position: chr1:20732826-20732691 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 175-312
Cow position: chr1:38419145-38419012 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 115, 0

Conread position: 175-312
Cow position: chr1:45478741-45478874 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 83, 0

Conread position: 175-312
Cow position: chr1:46031080-46030945 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 175-312
Cow position: chr1:56711481-56711614 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 83, 0

Conread position: 175-315
Cow position: chr1:242679-242539 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 175-323
Cow position: chr1:78809998-78809851 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 120
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 134, 0

Conread position: 175-330
Cow position: chr1:76436602-76436445 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 126
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 139, 0

Conread position: 176-272
Cow position: chr1:68245199-68245294 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 64, 0

Conread position: 176-281
Cow position: chr1:1380118-1380013 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 176-289
Cow position: chr1:60603456-60603569 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 176-290
Cow position: chr1:35165326-35165212 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 176-296
Cow position: chr1:69691594-69691714 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 176-298
Cow position: chr1:1878141-1878019 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 176-300
Cow position: chr1:7443097-7442972 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 121, 0

Conread position: 176-303
Cow position: chr1:88913440-88913314 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 176-304
Cow position: chr1:42482318-42482195 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 176-308
Cow position: chr1:55753095-55753226 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 99
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 106, 0

Conread position: 176-309
Cow position: chr1:31794888-31795017 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 176-309
Cow position: chr1:43872199-43872331 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 176-311
Cow position: chr1:81629729-81629862 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 176-312
Cow position: chr1:2972038-2971901 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 90, 0

Conread position: 176-312
Cow position: chr1:4291285-4291151 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 90, 81

Conread position: 176-312
Cow position: chr1:5751434-5751298 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 176-312
Cow position: chr1:21093237-21093102 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 176-312
Cow position: chr1:39068835-39068971 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 176-312
Cow position: chr1:65318695-65318560 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 118
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 22, 0

Conread position: 176-312
Cow position: chr1:74084070-74084203 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 79, 0

Conread position: 176-312
Cow position: chr1:86056954-86057086 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 176-312
Cow position: chr1:86061870-86062000 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 46, 84

Conread position: 176-312
Cow position: chr1:96964437-96964303 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 88, 0

Conread position: 176-312
Cow position: chr1:102468496-102468631 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 130, 0

Conread position: 176-314
Cow position: chr1:74027121-74027254 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 75, 42

Conread position: 176-318
Cow position: chr1:31607768-31607909 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 176-319
Cow position: chr1:20864174-20864035 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 81, 0

Conread position: 176-319
Cow position: chr1:42541719-42541576 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 176-327
Cow position: chr1:86073717-86073564 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 133, 0

Conread position: 176-365
Cow position: chr1:20871438-20871627 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 131
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 177-312
Cow position: chr1:42868820-42868951 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 117
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 78, 0

Conread position: 177-312
Cow position: chr1:51417891-51417758 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 177-312
Cow position: chr1:60045103-60044973 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 178-308
Cow position: chr1:89509802-89509932 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 77, 71

Conread position: 178-312
Cow position: chr1:73719580-73719446 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 180-290
Cow position: chr1:63994438-63994548 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 180-312
Cow position: chr1:26201349-26201221 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 180-312
Cow position: chr1:30504618-30504486 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 180-312
Cow position: chr1:31934624-31934492 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 180-312
Cow position: chr1:69539808-69539676 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 180-312
Cow position: chr1:72285951-72286083 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 180-316
Cow position: chr1:92075601-92075470 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 180-318
Cow position: chr1:5006278-5006141 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 181-286
Cow position: chr1:45673870-45673765 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 181-286
Cow position: chr1:81668701-81668806 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 181-288
Cow position: chr1:3776219-3776326 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 181-288
Cow position: chr1:15628398-15628291 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 85, 79

Conread position: 181-288
Cow position: chr1:39684030-39684136 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 105, 29

Conread position: 181-290
Cow position: chr1:34001164-34001054 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 181-291
Cow position: chr1:55194130-55194240 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 87
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 181-291
Cow position: chr1:90817107-90816997 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 181-299
Cow position: chr1:82877301-82877183 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 181-303
Cow position: chr1:29329657-29329535 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 181-305
Cow position: chr1:1496416-1496540 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 104
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 181-308
Cow position: chr1:52039752-52039627 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 181-310
Cow position: chr1:22525994-22525865 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 181-310
Cow position: chr1:45007584-45007451 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 109
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 181-310
Cow position: chr1:66430407-66430280 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 88, 0

Conread position: 181-310
Cow position: chr1:81809023-81809151 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 95, 0

Conread position: 181-310
Cow position: chr1:88618712-88618583 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 181-310
Cow position: chr1:98683989-98683861 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 64, 0

Conread position: 181-311
Cow position: chr1:65881921-65881793 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 181-311
Cow position: chr1:72422293-72422422 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 110
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 54, 0

Conread position: 181-311
Cow position: chr1:89076517-89076647 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 181-311
Cow position: chr1:91066036-91066165 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 181-312
Cow position: chr1:3914803-3914933 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 110
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 82, 0

Conread position: 181-312
Cow position: chr1:7971528-7971396 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 100, 0

Conread position: 181-312
Cow position: chr1:8287515-8287645 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 113
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 23, 0

Conread position: 181-312
Cow position: chr1:19466167-19466038 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 181-312
Cow position: chr1:19515503-19515634 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 115
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 181-312
Cow position: chr1:19885497-19885369 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 181-312
Cow position: chr1:22192885-22192754 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 181-312
Cow position: chr1:25734983-25734853 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 64, 0

Conread position: 181-312
Cow position: chr1:32001205-32001328 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 111
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 75, 0

Conread position: 181-312
Cow position: chr1:45223697-45223566 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 181-312
Cow position: chr1:47658461-47658330 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 181-312
Cow position: chr1:48581244-48581114 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 109
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 13, 0

Conread position: 181-312
Cow position: chr1:48730716-48730844 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 181-312
Cow position: chr1:49980825-49980695 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 63, 0

Conread position: 181-312
Cow position: chr1:53308278-53308404 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 110
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 32, 0

Conread position: 181-312
Cow position: chr1:53374544-53374419 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 181-312
Cow position: chr1:54478445-54478314 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 181-312
Cow position: chr1:64803986-64804117 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 110
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 181-312
Cow position: chr1:69694877-69695007 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 93, 100

Conread position: 181-312
Cow position: chr1:69940707-69940838 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 181-312
Cow position: chr1:71228208-71228078 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 181-312
Cow position: chr1:71350611-71350742 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 181-312
Cow position: chr1:71796196-71796325 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 58

Conread position: 181-312
Cow position: chr1:72011697-72011828 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 181-312
Cow position: chr1:76735365-76735493 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 181-312
Cow position: chr1:77425218-77425087 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 181-312
Cow position: chr1:81858784-81858917 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 113
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 73, 0

Conread position: 181-312
Cow position: chr1:85549962-85550093 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 109
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 181-312
Cow position: chr1:85688292-85688163 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 99
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 43, 0

Conread position: 181-312
Cow position: chr1:90267836-90267706 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 103, 0

Conread position: 181-312
Cow position: chr1:93810545-93810414 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 109
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 181-312
Cow position: chr1:95516155-95516024 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 181-312
Cow position: chr1:96081595-96081465 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 44, 0

Conread position: 181-312
Cow position: chr1:97232076-97231945 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 113
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 181-312
Cow position: chr1:98413888-98413757 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 109
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 181-312
Cow position: chr1:98897578-98897709 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 181-312
Cow position: chr1:101177631-101177500 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 181-312
Cow position: chr1:101632221-101632352 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 181-315
Cow position: chr1:7908153-7908019 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 181-315
Cow position: chr1:28563453-28563584 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 181-315
Cow position: chr1:42545663-42545797 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 181-315
Cow position: chr1:76019581-76019711 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 181-316
Cow position: chr1:72141688-72141558 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 181-318
Cow position: chr1:484351-484488 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 181-318
Cow position: chr1:628082-627939 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 181-318
Cow position: chr1:5636942-5637080 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 59, 0

Conread position: 181-318
Cow position: chr1:72105522-72105392 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 119
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 88, 0

Conread position: 181-319
Cow position: chr1:15334007-15333873 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 134, 69

Conread position: 181-319
Cow position: chr1:34771387-34771525 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 181-319
Cow position: chr1:43311915-43312053 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 181-329
Cow position: chr1:2462492-2462351 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 181-329
Cow position: chr1:48769918-48769769 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 133, 0

Conread position: 181-333
Cow position: chr1:85712555-85712403 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 123
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 149, 17

Conread position: 181-336
Cow position: chr1:95618758-95618605 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 132, 0

Conread position: 181-339
Cow position: chr1:9143834-9143678 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 133, 73

Conread position: 182-304
Cow position: chr1:26895696-26895818 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 182-312
Cow position: chr1:24561394-24561524 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 182-312
Cow position: chr1:24570832-24570962 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 111
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 182-312
Cow position: chr1:37309404-37309534 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 108
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 182-312
Cow position: chr1:95215075-95215205 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 182-322
Cow position: chr1:100421935-100421800 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 183-308
Cow position: chr1:64019407-64019532 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 104
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 183-310
Cow position: chr1:38205588-38205461 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 183-312
Cow position: chr1:30189266-30189135 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 183-312
Cow position: chr1:54156620-54156749 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 117
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 14, 68

Conread position: 183-312
Cow position: chr1:63530672-63530543 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 183-334
Cow position: chr1:61542805-61542955 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 122
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 74, 0

Conread position: 184-289
Cow position: chr1:78029919-78030024 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 184-290
Cow position: chr1:4027547-4027441 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 184-293
Cow position: chr1:6989263-6989154 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 184-310
Cow position: chr1:21823475-21823349 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 184-310
Cow position: chr1:60281486-60281360 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 184-311
Cow position: chr1:97144353-97144478 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 108
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 57, 74

Conread position: 184-312
Cow position: chr1:30983383-30983507 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 74

Conread position: 184-312
Cow position: chr1:34300438-34300566 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 106
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 184-312
Cow position: chr1:56832667-56832790 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 184-312
Cow position: chr1:94226442-94226569 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 92, 0

Conread position: 185-312
Cow position: chr1:53425289-53425161 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 106
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 77, 0

Conread position: 185-334
Cow position: chr1:54732375-54732520 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 12, 0

Conread position: 186-285
Cow position: chr1:15875771-15875672 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 186-289
Cow position: chr1:49297762-49297659 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 186-295
Cow position: chr1:60932-60821 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 186-311
Cow position: chr1:724851-724726 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 186-311
Cow position: chr1:72034813-72034937 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 104
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 113, 0

Conread position: 186-312
Cow position: chr1:21561123-21560997 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 186-312
Cow position: chr1:22730845-22730719 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 186-312
Cow position: chr1:64572626-64572500 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 186-312
Cow position: chr1:98461397-98461271 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 95
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 186-312
Cow position: chr1:101834926-101834804 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 186-321
Cow position: chr1:31272331-31272468 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 127, 0

Conread position: 187-309
Cow position: chr1:15547580-15547459 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 187-311
Cow position: chr1:44507083-44506959 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 20, 10

Conread position: 187-312
Cow position: chr1:26615964-26616091 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 107
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 98, 0

Conread position: 187-313
Cow position: chr1:77683462-77683336 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 108
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 187-317
Cow position: chr1:73020552-73020682 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 187-318
Cow position: chr1:21577919-21577787 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 117, 0

Conread position: 187-319
Cow position: chr1:89350075-89349943 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 190-312
Cow position: chr1:74955913-74956032 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 68

Conread position: 190-312
Cow position: chr1:75142104-75141982 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 103
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 190-312
Cow position: chr1:81355596-81355720 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 190-319
Cow position: chr1:67919242-67919113 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 191-310
Cow position: chr1:102345929-102346049 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 61

Conread position: 192-290
Cow position: chr1:97536395-97536295 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 197-312
Cow position: chr1:48444094-48444209 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 198-312
Cow position: chr1:51531850-51531738 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 199-329
Cow position: chr1:69540380-69540255 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 115, 51

Conread position: 206-312
Cow position: chr1:4374246-4374352 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.