Cow genome map

Conread name: rtes36_o11r1.y1

Conread position: 135-321
Cow position: chr26:9104108-9104293 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 32, 50

Conread position: 138-333
Cow position: chr26:11263807-11263616 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 26, 45

Conread position: 139-312
Cow position: chr26:9604728-9604558 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 15, 0

Conread position: 139-312
Cow position: chr26:26294025-26294196 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 26, 143

Conread position: 139-312
Cow position: chr26:32776342-32776510 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 93

Conread position: 143-312
Cow position: chr26:31462009-31462173 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 21

Conread position: 163-312
Cow position: chr26:16435511-16435660 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 163-312
Cow position: chr26:32601498-32601347 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 6, 139

Conread position: 165-318
Cow position: chr26:7314965-7315117 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 105

Conread position: 166-312
Cow position: chr26:24240821-24240676 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 91, 0

Conread position: 169-325
Cow position: chr26:29889375-29889528 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 170-312
Cow position: chr26:8353107-8352965 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 173-312
Cow position: chr26:24453775-24453911 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 84, 0

Conread position: 173-312
Cow position: chr26:33011535-33011672 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 68, 0

Conread position: 174-291
Cow position: chr26:28202625-28202742 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 174-295
Cow position: chr26:28446717-28446596 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 174-302
Cow position: chr26:16796076-16796200 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 174-302
Cow position: chr26:33392528-33392400 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 174-304
Cow position: chr26:19774166-19774295 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 108
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 7, 0

Conread position: 174-304
Cow position: chr26:25225599-25225729 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 174-305
Cow position: chr26:9501842-9501712 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 109
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 101, 89

Conread position: 174-305
Cow position: chr26:32563481-32563352 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 174-308
Cow position: chr26:677846-677980 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 174-308
Cow position: chr26:20769985-20769851 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 174-308
Cow position: chr26:31903300-31903167 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 7, 0

Conread position: 174-310
Cow position: chr26:6794284-6794143 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 174-310
Cow position: chr26:22249349-22249479 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 174-311
Cow position: chr26:16922072-16921935 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 11, 66

Conread position: 174-311
Cow position: chr26:28374309-28374446 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 112
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 174-311
Cow position: chr26:32834445-32834580 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 113
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 110, 0

Conread position: 174-312
Cow position: chr26:829939-829801 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 115
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 174-312
Cow position: chr26:3706925-3706788 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 115
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 45, 0

Conread position: 174-312
Cow position: chr26:4807688-4807554 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 117
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 82, 0

Conread position: 174-312
Cow position: chr26:12893294-12893431 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 116
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 37, 0

Conread position: 174-312
Cow position: chr26:17057813-17057674 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 73, 0

Conread position: 174-312
Cow position: chr26:19671608-19671474 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 174-312
Cow position: chr26:20260716-20260584 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 7, 96

Conread position: 174-312
Cow position: chr26:22152361-22152223 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 174-312
Cow position: chr26:32571427-32571289 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 37, 42

Conread position: 174-312
Cow position: chr26:32655474-32655613 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 94, 82

Conread position: 174-312
Cow position: chr26:32830214-32830077 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 116
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 51, 0

Conread position: 174-312
Cow position: chr26:33475830-33475687 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 174-312
Cow position: chr26:35449197-35449059 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 174-315
Cow position: chr26:33253182-33253323 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 117
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 174-318
Cow position: chr26:29664023-29664169 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 121
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 70, 0

Conread position: 174-318
Cow position: chr26:34314824-34314681 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 174-319
Cow position: chr26:9839415-9839554 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 174-319
Cow position: chr26:22348878-22349023 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 119
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 91, 70

Conread position: 174-319
Cow position: chr26:31633862-31633717 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 174-326
Cow position: chr26:17398710-17398560 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 135, 0

Conread position: 174-339
Cow position: chr26:18381446-18381285 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 132
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 7, 0

Conread position: 175-300
Cow position: chr26:5407112-5406987 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 175-312
Cow position: chr26:10939100-10938968 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 176-299
Cow position: chr26:13100224-13100347 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 176-311
Cow position: chr26:10764343-10764209 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 176-312
Cow position: chr26:6714170-6714304 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 24, 16

Conread position: 176-312
Cow position: chr26:6865156-6865020 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 176-312
Cow position: chr26:11672429-11672293 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 176-312
Cow position: chr26:23671547-23671412 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 176-312
Cow position: chr26:25074849-25074713 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 112
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 176-312
Cow position: chr26:25526381-25526245 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 112
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 176-312
Cow position: chr26:30026356-30026225 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 177-312
Cow position: chr26:33857063-33857198 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 8, 52

Conread position: 178-293
Cow position: chr26:34114392-34114277 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 180-308
Cow position: chr26:5246350-5246478 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 181-286
Cow position: chr26:17423272-17423377 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 181-288
Cow position: chr26:2930132-2930235 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 181-308
Cow position: chr26:12940527-12940400 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 181-310
Cow position: chr26:19146026-19145900 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 181-311
Cow position: chr26:1325884-1325754 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 181-312
Cow position: chr26:4585086-4585214 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 181-312
Cow position: chr26:5985690-5985816 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 181-312
Cow position: chr26:7224214-7224346 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 110
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 60, 0

Conread position: 181-312
Cow position: chr26:10965466-10965598 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 19, 0

Conread position: 181-312
Cow position: chr26:12237902-12238032 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 98, 0

Conread position: 181-312
Cow position: chr26:16594375-16594503 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 181-312
Cow position: chr26:30254507-30254637 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 181-312
Cow position: chr26:32353593-32353724 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 181-318
Cow position: chr26:8643068-8642938 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 181-319
Cow position: chr26:11538659-11538522 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 133, 0

Conread position: 181-323
Cow position: chr26:18876835-18876976 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 133, 0

Conread position: 182-312
Cow position: chr26:22354540-22354409 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 110
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 33, 0

Conread position: 183-312
Cow position: chr26:26466607-26466732 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 183-318
Cow position: chr26:9099407-9099541 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 116, 0

Conread position: 184-315
Cow position: chr26:7148182-7148312 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 184-320
Cow position: chr26:7157482-7157618 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 186-299
Cow position: chr26:3071855-3071966 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 186-308
Cow position: chr26:21636916-21637037 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 187-310
Cow position: chr26:33456402-33456522 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 187-312
Cow position: chr26:8699926-8700051 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 204-310
Cow position: chr26:32670392-32670497 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 206-312
Cow position: chr26:22602936-22603042 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.