Cow genome map


           Conread name:
           rthg09_p11.y1
        

               Conread position:
               206-492
               

               Cow position:
               chr17:37440623-37440332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 15
               

               Conread position:
               220-492
               

               Cow position:
               chr17:4065112-4064852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               7, 49
               

               Conread position:
               226-394
               

               Cow position:
               chr17:8505487-8505315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               36, 47
               

               Conread position:
               231-538
               

               Cow position:
               chr17:26720-27034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               68, 37
               

               Conread position:
               250-534
               

               Cow position:
               chr17:14229031-14229315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               48, 25
               

               Conread position:
               254-488
               

               Cow position:
               chr17:12434200-12433958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               44, 16
               

               Conread position:
               279-492
               

               Cow position:
               chr17:19093123-19092917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               171, 28
               

               Conread position:
               304-494
               

               Cow position:
               chr17:19116908-19116714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               16, 186
               

               Conread position:
               319-492
               

               Cow position:
               chr17:2000030-2000208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               89, 39
               

               Conread position:
               342-492
               

               Cow position:
               chr17:35172569-35172722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               361-489
               

               Cow position:
               chr17:32876739-32876869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               384-492
               

               Cow position:
               chr17:21340539-21340650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               15, 0
               
Show alignments to all cow chromosomes.