Cow genome map


           Conread name:
           rthg09_p11.y1
        

               Conread position:
               226-408
               

               Cow position:
               chr18:21110619-21110800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               73, 42
               

               Conread position:
               231-489
               

               Cow position:
               chr18:15689464-15689718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               21, 50
               

               Conread position:
               231-526
               

               Cow position:
               chr18:37884278-37884576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               67, 37
               

               Conread position:
               245-492
               

               Cow position:
               chr18:21766843-21766589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 30
               

               Conread position:
               247-525
               

               Cow position:
               chr18:11160155-11159886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               115, 21
               

               Conread position:
               248-487
               

               Cow position:
               chr18:46119135-46119372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               50, 21
               

               Conread position:
               298-489
               

               Cow position:
               chr18:52742774-52742965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               64, 7
               

               Conread position:
               302-501
               

               Cow position:
               chr18:27447795-27447996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               18, 164
               

               Conread position:
               342-443
               

               Cow position:
               chr18:31986570-31986672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               84
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               361-495
               

               Cow position:
               chr18:41073791-41073655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               388-514
               

               Cow position:
               chr18:21111005-21111135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               62, 0
               
Show alignments to all cow chromosomes.