Cow genome map


           Conread name:
           rthg09_p11.y1
        

               Conread position:
               226-397
               

               Cow position:
               chr20:14215043-14214860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               226-488
               

               Cow position:
               chr20:1237082-1236815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               30, 54
               

               Conread position:
               226-536
               

               Cow position:
               chr20:12580016-12579702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               231
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               50, 114
               

               Conread position:
               230-488
               

               Cow position:
               chr20:8562407-8562154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               68, 38
               

               Conread position:
               231-488
               

               Cow position:
               chr20:1880752-1880489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               67, 40
               

               Conread position:
               243-488
               

               Cow position:
               chr20:8479217-8478972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               43, 27
               

               Conread position:
               244-488
               

               Cow position:
               chr20:3004920-3005170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               6, 51
               

               Conread position:
               250-525
               

               Cow position:
               chr20:1514325-1514607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               202
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               319-485
               

               Cow position:
               chr20:26252101-26251932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               330-492
               

               Cow position:
               chr20:36785446-36785609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               36, 52
               

               Conread position:
               341-526
               

               Cow position:
               chr20:40108001-40107810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               25, 86
               

               Conread position:
               373-526
               

               Cow position:
               chr20:34987090-34986935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               77, 92
               
Show alignments to all cow chromosomes.