Cow genome map


           Conread name:
           rthg09_p11.y1
        

               Conread position:
               221-485
               

               Cow position:
               chr27:1090561-1090299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               77, 12
               

               Conread position:
               229-412
               

               Cow position:
               chr27:20804430-20804616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               57, 39
               

               Conread position:
               231-399
               

               Cow position:
               chr27:15418675-15418502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               66, 40
               

               Conread position:
               234-492
               

               Cow position:
               chr27:26917819-26918076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               64, 34
               

               Conread position:
               245-489
               

               Cow position:
               chr27:7533635-7533883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               53, 33
               

               Conread position:
               247-517
               

               Cow position:
               chr27:29390058-29390326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               51, 21
               

               Conread position:
               275-536
               

               Cow position:
               chr27:13818369-13818628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               23, 40
               

               Conread position:
               279-492
               

               Cow position:
               chr27:21258720-21258944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               368-489
               

               Cow position:
               chr27:13919120-13919243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               83, 0
               
Show alignments to all cow chromosomes.