Cow genome map
| Conread name: | rthg09_p11.y1 |
| Conread position: | 209-497 |
| Cow position: | chr4:50554172-50554460 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 89, 50 |
| Conread position: | 220-413 |
| Cow position: | chr4:28563768-28563966 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 78, 52 |
| Conread position: | 221-406 |
| Cow position: | chr4:38263629-38263443 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 71, 59 |
| Conread position: | 221-536 |
| Cow position: | chr4:7434599-7434275 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 145 |
| Conread position: | 226-536 |
| Cow position: | chr4:51928751-51929068 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 229 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 66, 17 |
| Conread position: | 231-483 |
| Cow position: | chr4:47624215-47623977 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 35, 88 |
| Conread position: | 238-464 |
| Cow position: | chr4:38056191-38056415 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 60, 30 |
| Conread position: | 245-492 |
| Cow position: | chr4:23098266-23098005 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 21, 209 |
| Conread position: | 249-489 |
| Cow position: | chr4:43087145-43086908 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 53, 17 |
| Conread position: | 259-536 |
| Cow position: | chr4:61476984-61477268 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 209 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 39, 12 |
| Conread position: | 299-426 |
| Cow position: | chr4:27476303-27476174 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 299-538 |
| Cow position: | chr4:61060493-61060252 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 21, 119 |
| Conread position: | 319-483 |
| Cow position: | chr4:48314746-48314590 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 42, 113 |
| Conread position: | 320-492 |
| Cow position: | chr4:53355748-53355920 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 42, 65 |
| Conread position: | 349-538 |
| Cow position: | chr4:12043922-12044115 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 368-525 |
| Cow position: | chr4:37684997-37684841 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 83, 50 |
| Conread position: | 370-488 |
| Cow position: | chr4:34572805-34572685 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 381-489 |
| Cow position: | chr4:13374231-13374120 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
Show alignments to all cow chromosomes.