Cow genome map
| Conread name: | rthg09_p11.y1 |
| Conread position: | 213-538 |
| Cow position: | chr5:7280162-7280513 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 59, 10 |
| Conread position: | 216-488 |
| Cow position: | chr5:54738197-54738474 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 82, 55 |
| Conread position: | 219-489 |
| Cow position: | chr5:33698470-33698196 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 188 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 67, 48 |
| Conread position: | 221-492 |
| Cow position: | chr5:4748470-4748203 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 77, 24 |
| Conread position: | 226-454 |
| Cow position: | chr5:32989718-32989941 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 72, 49 |
| Conread position: | 226-488 |
| Cow position: | chr5:29425356-29425086 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 25, 45 |
| Conread position: | 226-508 |
| Cow position: | chr5:14775000-14775264 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 205 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 72, 39 |
| Conread position: | 226-536 |
| Cow position: | chr5:26186755-26187065 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 210 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 72, 36 |
| Conread position: | 230-482 |
| Cow position: | chr5:36047331-36047601 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 36, 21 |
| Conread position: | 231-440 |
| Cow position: | chr5:16174091-16173874 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 35, 116 |
| Conread position: | 235-492 |
| Cow position: | chr5:5725808-5726063 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 63, 35 |
| Conread position: | 236-534 |
| Cow position: | chr5:37915423-37915729 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 18 |
| Conread position: | 238-492 |
| Cow position: | chr5:23452588-23452831 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 60, 30 |
| Conread position: | 248-526 |
| Cow position: | chr5:1251181-1251464 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 50, 20 |
| Conread position: | 249-492 |
| Cow position: | chr5:57114959-57115211 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 25, 196 |
| Conread position: | 250-538 |
| Cow position: | chr5:7920793-7920498 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 48, 28 |
| Conread position: | 263-485 |
| Cow position: | chr5:35457082-35457311 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 175 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 279-536 |
| Cow position: | chr5:40746259-40746512 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 19, 108 |
| Conread position: | 303-489 |
| Cow position: | chr5:16273031-16273218 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 19, 29 |
| Conread position: | 319-536 |
| Cow position: | chr5:58033372-58033591 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 47, 29 |
| Conread position: | 325-498 |
| Cow position: | chr5:58355288-58355115 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 16, 55 |
| Conread position: | 342-536 |
| Cow position: | chr5:63303075-63303267 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 20, 53 |
| Conread position: | 342-538 |
| Cow position: | chr5:29066598-29066799 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 355-526 |
| Cow position: | chr5:36854688-36854512 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 373-538 |
| Cow position: | chr5:33347122-33346965 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 377-492 |
| Cow position: | chr5:56600451-56600567 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 78, 47 |
| Conread position: | 382-492 |
| Cow position: | chr5:68952055-68952168 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 68, 0 |
Show alignments to all cow chromosomes.