Cow genome map
| Conread name: | rthg09_p11.y1 |
| Conread position: | 211-492 |
| Cow position: | chr9:23989150-23989438 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 53, 12 |
| Conread position: | 225-492 |
| Cow position: | chr9:28891403-28891678 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 208 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 21, 45 |
| Conread position: | 226-492 |
| Cow position: | chr9:29009588-29009327 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 79, 49 |
| Conread position: | 227-495 |
| Cow position: | chr9:30333327-30333049 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 12, 6 |
| Conread position: | 234-535 |
| Cow position: | chr9:31525119-31524807 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 44 |
| Conread position: | 238-536 |
| Cow position: | chr9:34548805-34549113 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 222 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 82, 30 |
| Conread position: | 251-538 |
| Cow position: | chr9:52423377-52423660 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 66, 17 |
| Conread position: | 252-526 |
| Cow position: | chr9:43859599-43859871 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 45, 26 |
| Conread position: | 253-492 |
| Cow position: | chr9:41287979-41287734 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 45, 18 |
| Conread position: | 271-511 |
| Cow position: | chr9:27453471-27453223 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 279-492 |
| Cow position: | chr9:15236359-15236139 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 21, 100 |
| Conread position: | 299-489 |
| Cow position: | chr9:21925403-21925594 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 154 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 21, 79 |
| Conread position: | 315-486 |
| Cow position: | chr9:45311105-45311277 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 47, 11 |
| Conread position: | 320-492 |
| Cow position: | chr9:23937471-23937643 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 42, 108 |
| Conread position: | 322-488 |
| Cow position: | chr9:10787627-10787462 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 40, 155 |
| Conread position: | 331-526 |
| Cow position: | chr9:45427721-45427525 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 332-535 |
| Cow position: | chr9:31501212-31501014 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 9, 48 |
| Conread position: | 345-492 |
| Cow position: | chr9:10790676-10790532 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 108, 18 |
| Conread position: | 350-508 |
| Cow position: | chr9:11911412-11911256 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 105, 31 |
| Conread position: | 365-492 |
| Cow position: | chr9:50640196-50640067 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 371-492 |
| Cow position: | chr9:60777924-60778049 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 374-492 |
| Cow position: | chr9:42973078-42972960 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 5, 89 |
| Conread position: | 381-538 |
| Cow position: | chr9:4504345-4504187 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 72, 112 |
| Conread position: | 400-536 |
| Cow position: | chr9:17803493-17803632 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 48, 76 |
Show alignments to all cow chromosomes.