Cow genome map

Conread name: rthg11_h16.y1

Conread position: 150-614
Cow position: chr13:6153427-6153895 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 98

Conread position: 166-614
Cow position: chr13:52585689-52586148 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 327
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 130, 13

Conread position: 168-614
Cow position: chr13:31814197-31813765 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 59

Conread position: 171-356
Cow position: chr13:28570168-28569987 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 171-458
Cow position: chr13:21155160-21155445 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 212
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 190, 74

Conread position: 171-524
Cow position: chr13:5752095-5752449 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 249
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 192, 44

Conread position: 171-528
Cow position: chr13:20863687-20864041 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 81

Conread position: 171-531
Cow position: chr13:13266132-13265777 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 77

Conread position: 171-533
Cow position: chr13:562806-563172 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 266
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 181, 95

Conread position: 171-557
Cow position: chr13:41253956-41253566 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 264
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 120, 8

Conread position: 171-593
Cow position: chr13:25062746-25062323 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 74

Conread position: 171-593
Cow position: chr13:45604081-45604506 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 290
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 99, 119

Conread position: 171-595
Cow position: chr13:17613677-17613248 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 91

Conread position: 171-596
Cow position: chr13:23269882-23270298 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 74

Conread position: 171-602
Cow position: chr13:1042625-1043068 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 102

Conread position: 171-604
Cow position: chr13:42114348-42113920 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 56

Conread position: 171-605
Cow position: chr13:6616417-6616861 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 74

Conread position: 171-605
Cow position: chr13:25531459-25531892 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 25

Conread position: 171-610
Cow position: chr13:10928662-10929095 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 71

Conread position: 171-611
Cow position: chr13:8362415-8362851 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 74

Conread position: 171-611
Cow position: chr13:12546572-12547016 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 309
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 85, 61

Conread position: 171-612
Cow position: chr13:40722358-40722816 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 159

Conread position: 171-612
Cow position: chr13:56686762-56686325 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 117

Conread position: 171-613
Cow position: chr13:311763-311328 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 72

Conread position: 171-613
Cow position: chr13:19882708-19883146 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 80

Conread position: 171-613
Cow position: chr13:46525110-46525536 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 78

Conread position: 171-614
Cow position: chr13:889853-890283 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 73

Conread position: 171-614
Cow position: chr13:7663099-7663533 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 12

Conread position: 171-614
Cow position: chr13:12670126-12670562 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 321
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 126, 42

Conread position: 171-614
Cow position: chr13:13321111-13320686 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 74

Conread position: 171-614
Cow position: chr13:14063167-14063632 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 153

Conread position: 171-614
Cow position: chr13:15288601-15289032 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 52

Conread position: 171-614
Cow position: chr13:17820930-17821381 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 33

Conread position: 171-614
Cow position: chr13:20666057-20666497 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 74

Conread position: 171-614
Cow position: chr13:22085429-22085857 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 73

Conread position: 171-614
Cow position: chr13:32017192-32017622 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 74

Conread position: 171-614
Cow position: chr13:37483939-37484390 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 74

Conread position: 171-614
Cow position: chr13:40943574-40943133 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 74

Conread position: 171-614
Cow position: chr13:41807097-41806661 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 32

Conread position: 171-614
Cow position: chr13:45022854-45023320 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 344

Conread position: 171-614
Cow position: chr13:51941060-51940623 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 75

Conread position: 171-614
Cow position: chr13:52057869-52057446 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 73

Conread position: 172-514
Cow position: chr13:15869447-15869112 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 81

Conread position: 172-614
Cow position: chr13:17158534-17158989 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 307
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 145, 73

Conread position: 172-614
Cow position: chr13:20563327-20562882 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 11

Conread position: 172-614
Cow position: chr13:21235359-21235782 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 86

Conread position: 172-614
Cow position: chr13:24754213-24753776 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 10

Conread position: 172-614
Cow position: chr13:38329962-38329505 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 44

Conread position: 173-477
Cow position: chr13:6606691-6606999 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 219
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 186, 70

Conread position: 173-485
Cow position: chr13:60690390-60690711 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 234
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 199, 72

Conread position: 173-580
Cow position: chr13:61976636-61977037 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 72

Conread position: 173-614
Cow position: chr13:152272-151852 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 73

Conread position: 173-614
Cow position: chr13:6974494-6974051 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 72

Conread position: 173-614
Cow position: chr13:23856567-23856100 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 42

Conread position: 173-614
Cow position: chr13:34263053-34263481 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 36

Conread position: 173-614
Cow position: chr13:43138900-43139324 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 72

Conread position: 174-455
Cow position: chr13:3003772-3003492 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 203
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 187, 70

Conread position: 174-507
Cow position: chr13:37516806-37517141 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 71

Conread position: 174-584
Cow position: chr13:46324461-46324870 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 65

Conread position: 176-614
Cow position: chr13:15884662-15885133 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 415

Conread position: 177-502
Cow position: chr13:5091337-5091665 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 46

Conread position: 177-600
Cow position: chr13:15446367-15445940 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 288
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 172, 20

Conread position: 178-614
Cow position: chr13:57493860-57494300 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 67

Conread position: 179-483
Cow position: chr13:4553122-4552821 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 222
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 83, 94

Conread position: 183-614
Cow position: chr13:27524943-27525371 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 62

Conread position: 184-610
Cow position: chr13:20649664-20650094 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 23

Conread position: 185-614
Cow position: chr13:13089344-13088918 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 64

Conread position: 193-591
Cow position: chr13:34035677-34035279 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 289
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 103, 52

Conread position: 198-492
Cow position: chr13:14227248-14226939 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 215
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 68, 51

Conread position: 198-614
Cow position: chr13:14927541-14927151 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 47

Conread position: 204-614
Cow position: chr13:25817811-25817416 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 41

Conread position: 216-614
Cow position: chr13:51821602-51821984 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 277
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 57, 48

Conread position: 227-614
Cow position: chr13:6079144-6079523 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 276
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 69, 22

Conread position: 245-482
Cow position: chr13:26261526-26261780 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 193
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 11, 39

Conread position: 248-614
Cow position: chr13:9265550-9265938 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 268
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 6, 203

Conread position: 248-614
Cow position: chr13:21287831-21288196 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 23

Conread position: 253-611
Cow position: chr13:23960544-23960910 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 270
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 34, 22

Conread position: 254-614
Cow position: chr13:48037878-48037512 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 29

Conread position: 256-612
Cow position: chr13:43184621-43184990 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 264
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 20, 34

Conread position: 265-614
Cow position: chr13:11061234-11060876 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 110

Conread position: 265-614
Cow position: chr13:60974325-60973968 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 259
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 26, 10

Conread position: 277-614
Cow position: chr13:46182022-46181681 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 241
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 19, 27

Conread position: 280-614
Cow position: chr13:37804109-37803780 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 57

Conread position: 281-515
Cow position: chr13:9587353-9587601 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 180
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 15, 207

Conread position: 282-515
Cow position: chr13:18551678-18551436 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 14, 192

Conread position: 282-560
Cow position: chr13:2463001-2463292 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 205
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 126, 282

Conread position: 282-605
Cow position: chr13:37985521-37985846 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 228
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 14, 196

Conread position: 282-605
Cow position: chr13:45353272-45352929 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 247
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 85, 10

Conread position: 282-611
Cow position: chr13:13501392-13501726 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 27

Conread position: 282-613
Cow position: chr13:6060778-6061118 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 215

Conread position: 282-614
Cow position: chr13:11460853-11460522 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 155

Conread position: 282-614
Cow position: chr13:17021490-17021836 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 212

Conread position: 282-614
Cow position: chr13:18166960-18166621 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 99

Conread position: 282-614
Cow position: chr13:23166867-23167211 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 241
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 14, 282

Conread position: 282-614
Cow position: chr13:23667492-23667142 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 242
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 14, 257

Conread position: 287-480
Cow position: chr13:22115928-22115726 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 5, 79

Conread position: 287-480
Cow position: chr13:24155765-24155562 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 5, 115

Conread position: 287-614
Cow position: chr13:20784813-20784479 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 175

Conread position: 289-608
Cow position: chr13:9593730-9593400 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 282

Conread position: 289-614
Cow position: chr13:18172561-18172225 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 209

Conread position: 289-614
Cow position: chr13:45073714-45074025 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 229
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 123, 65

Conread position: 290-524
Cow position: chr13:12283058-12282818 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 175
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 71, 186

Conread position: 291-456
Cow position: chr13:22025482-22025659 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 144
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 39, 0

Conread position: 292-482
Cow position: chr13:48251774-48251968 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 159
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 122, 63

Conread position: 292-510
Cow position: chr13:21904880-21904656 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 124, 70

Conread position: 292-511
Cow position: chr13:37795652-37795435 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 120, 62

Conread position: 292-520
Cow position: chr13:54237564-54237336 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 173
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 75, 93

Conread position: 292-522
Cow position: chr13:5278971-5279212 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 179
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 122, 69

Conread position: 292-524
Cow position: chr13:6975572-6975816 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 182
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 86, 0

Conread position: 292-524
Cow position: chr13:20041743-20041991 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 187
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 72, 0

Conread position: 292-524
Cow position: chr13:54093958-54093724 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 184
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 118, 69

Conread position: 292-525
Cow position: chr13:52199307-52199064 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 181
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 62, 194

Conread position: 292-534
Cow position: chr13:55295407-55295655 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 190
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 120, 230

Conread position: 292-557
Cow position: chr13:30693919-30693659 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 195
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 95, 74

Conread position: 292-587
Cow position: chr13:55315971-55316275 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 275

Conread position: 292-591
Cow position: chr13:44626598-44626280 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 214
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 67, 278

Conread position: 292-602
Cow position: chr13:18244074-18243763 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 69

Conread position: 292-605
Cow position: chr13:8524404-8524720 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 63

Conread position: 292-605
Cow position: chr13:12614478-12614151 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 228
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 75, 274

Conread position: 292-605
Cow position: chr13:15974828-15974516 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 230
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 122, 69

Conread position: 292-608
Cow position: chr13:52285034-52284710 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 230
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 61, 207

Conread position: 292-611
Cow position: chr13:8201269-8201591 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 11

Conread position: 292-612
Cow position: chr13:13465572-13465875 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 231
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 120, 142

Conread position: 292-613
Cow position: chr13:13176867-13176540 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 96

Conread position: 292-614
Cow position: chr13:3315456-3315786 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 239
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 75, 109

Conread position: 292-614
Cow position: chr13:4664644-4664968 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 234
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 75, 208

Conread position: 292-614
Cow position: chr13:10845811-10845493 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 233
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 75, 131

Conread position: 292-614
Cow position: chr13:12202583-12202251 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 96

Conread position: 292-614
Cow position: chr13:15192676-15192997 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 230
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 120, 73

Conread position: 292-614
Cow position: chr13:17745457-17745137 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 168

Conread position: 292-614
Cow position: chr13:19393505-19393181 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 206

Conread position: 292-614
Cow position: chr13:21241874-21242195 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 145

Conread position: 292-614
Cow position: chr13:23479247-23478919 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 105

Conread position: 292-614
Cow position: chr13:24369803-24369471 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 177

Conread position: 292-614
Cow position: chr13:42200837-42200508 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 154

Conread position: 292-614
Cow position: chr13:43194393-43194058 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 230
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 69, 272

Conread position: 292-614
Cow position: chr13:47963983-47964292 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 243
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 120, 46

Conread position: 293-456
Cow position: chr13:11147523-11147352 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 74, 0

Conread position: 294-480
Cow position: chr13:48944877-48944691 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 112, 65

Conread position: 296-593
Cow position: chr13:51014966-51015268 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 211
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 65, 179

Conread position: 297-597
Cow position: chr13:19022491-19022177 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 268

Conread position: 298-614
Cow position: chr13:15528819-15529148 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 10

Conread position: 304-614
Cow position: chr13:20679551-20679228 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 244
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 67, 49

Conread position: 306-611
Cow position: chr13:37592734-37593055 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 230
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 61, 203

Conread position: 310-614
Cow position: chr13:24230413-24230103 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 228
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 26, 181

Conread position: 312-611
Cow position: chr13:24715440-24715133 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 220
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 92, 87

Conread position: 313-605
Cow position: chr13:8652240-8652544 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 217
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 16, 250

Conread position: 315-614
Cow position: chr13:48165234-48165537 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 215
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 97, 45

Conread position: 318-461
Cow position: chr13:5079033-5079179 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 16

Conread position: 320-605
Cow position: chr13:15195019-15195307 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 203
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 97, 34

Conread position: 321-614
Cow position: chr13:14771650-14771342 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 217
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 49, 255

Conread position: 323-603
Cow position: chr13:55583386-55583094 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 197
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 168

Conread position: 327-614
Cow position: chr13:5082837-5082540 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 212
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 44, 200

Conread position: 327-614
Cow position: chr13:49503345-49503643 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 212
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 51, 69

Conread position: 330-598
Cow position: chr13:52929880-52929616 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 190
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 76, 24

Conread position: 334-612
Cow position: chr13:52055420-52055701 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 193
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 83

Conread position: 334-614
Cow position: chr13:49022694-49022979 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 202
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 34, 121

Conread position: 336-614
Cow position: chr13:15110498-15110203 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 25, 239

Conread position: 340-521
Cow position: chr13:7790184-7789989 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 27, 0

Conread position: 340-614
Cow position: chr13:53574139-53573858 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 196
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 35, 226

Conread position: 345-614
Cow position: chr13:15903182-15902913 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 201
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 20, 107

Conread position: 349-602
Cow position: chr13:19188460-19188202 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 184
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 61, 146

Conread position: 363-562
Cow position: chr13:14870674-14870474 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 118

Conread position: 363-612
Cow position: chr13:18696987-18696732 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 190
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 46, 139

Conread position: 363-613
Cow position: chr13:18058104-18058360 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 198
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 49, 21

Conread position: 363-614
Cow position: chr13:8374627-8374883 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 192
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 49, 138

Conread position: 363-614
Cow position: chr13:17568954-17569212 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 186
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 41, 184

Conread position: 363-614
Cow position: chr13:20473546-20473793 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 188
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 101, 49

Conread position: 363-614
Cow position: chr13:26698352-26698609 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 188
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 51, 199

Conread position: 363-614
Cow position: chr13:54388876-54389132 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 188
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 49, 35

Conread position: 365-614
Cow position: chr13:11381579-11381834 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 186
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 47, 167

Conread position: 366-605
Cow position: chr13:2823001-2822768 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 165
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 48, 44

Conread position: 369-614
Cow position: chr13:51115889-51116135 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 177
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 43, 87

Conread position: 370-562
Cow position: chr13:10098853-10099048 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 38, 112

Conread position: 379-614
Cow position: chr13:11591875-11591640 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 111

Conread position: 387-614
Cow position: chr13:34555711-34555939 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 32, 71

Conread position: 389-612
Cow position: chr13:51901705-51901475 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 57, 9

Conread position: 389-614
Cow position: chr13:15194613-15194846 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 23, 179

Conread position: 389-614
Cow position: chr13:19279209-19278984 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 20, 7

Conread position: 400-614
Cow position: chr13:19320643-19320421 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 12, 110

Conread position: 403-614
Cow position: chr13:7265020-7265231 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 9, 102

Conread position: 403-614
Cow position: chr13:8355302-8355094 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 9, 45

Conread position: 404-614
Cow position: chr13:8402160-8401945 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 28, 161

Conread position: 404-614
Cow position: chr13:20534984-20534786 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 51

Conread position: 406-614
Cow position: chr13:13196342-13196128 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 19, 98

Conread position: 413-614
Cow position: chr13:46329511-46329717 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 45, 92

Conread position: 418-614
Cow position: chr13:48862008-48862206 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 46, 85

Conread position: 432-614
Cow position: chr13:20868682-20868862 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 58

Conread position: 438-614
Cow position: chr13:29123373-29123193 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 61

Conread position: 440-614
Cow position: chr13:18181713-18181886 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 87, 16

Conread position: 444-614
Cow position: chr13:28440478-28440646 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 12

Conread position: 448-614
Cow position: chr13:18197553-18197719 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 64

Conread position: 457-614
Cow position: chr13:55494476-55494637 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 114

Conread position: 458-614
Cow position: chr13:17611507-17611663 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 68, 93

Conread position: 468-612
Cow position: chr13:31529912-31529768 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 62, 92

Show alignments to all cow chromosomes.